RNA–Protein interactions for RNA: ENST00000544596.5

ABCA13-207, Transcript of ATP binding cassette subfamily A member 13, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene ABCA13, Length 7,870 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA13-207ENST00000544596 DCAF8L2P0C7V8 631 aa14.04□□□□□ -0.16
ABCA13-207ENST00000544596 EHMT2Q96KQ7 1210 aa13.16□□□□□ -0.3
ABCA13-207ENST00000544596 PELP1Q8IZL8 1130 aaKnown RBP13.16□□□□□ -0.3
ABCA13-207ENST00000544596 SUPT5HO00267 1087 aaKnown RBP13□□□□□ -0.33
ABCA13-207ENST00000544596 ERICH6Q7L0X2 663 aa12.81□□□□□ -0.36
ABCA13-207ENST00000544596 APLP2Q06481 763 aa12.8□□□□□ -0.36
ABCA13-207ENST00000544596 FAM9AQ8IZU1 332 aaPredicted RBP12.73□□□□□ -0.37
ABCA13-207ENST00000544596 TTBK1Q5TCY1 1321 aaPredicted RBP12.7□□□□□ -0.38
ABCA13-207ENST00000544596 CCER1Q8TC90 406 aaPredicted RBP12.6□□□□□ -0.39
ABCA13-207ENST00000544596 SHROOM4Q9ULL8 1493 aa12.55□□□□□ -0.4
ABCA13-207ENST00000544596 RANGAP1P46060 587 aaPredicted RBP12.54□□□□□ -0.4
ABCA13-207ENST00000544596 ATP1B4Q9UN42 357 aaPredicted RBP12.51□□□□□ -0.41
ABCA13-207ENST00000544596 MYT1Q01538 1121 aa12.44□□□□□ -0.42
ABCA13-207ENST00000544596 PCGF6Q9BYE7 350 aa12.4□□□□□ -0.42
ABCA13-207ENST00000544596 CENPBP07199 599 aaPredicted RBP12.3□□□□□ -0.44
ABCA13-207ENST00000544596 NEFLP07196 543 aa12.29□□□□□ -0.44
ABCA13-207ENST00000544596 MYT1LQ9UL68 1186 aa12.24□□□□□ -0.45
ABCA13-207ENST00000544596 YTHDC1Q96MU7 727 aaKnown RBP12.22□□□□□ -0.45
ABCA13-207ENST00000544596 DAXXQ9UER7 740 aaPredicted RBP12.22□□□□□ -0.45
ABCA13-207ENST00000544596 CHIC1Q5VXU3 224 aa12.16□□□□□ -0.46
ABCA13-207ENST00000544596 POLR3GLQ9BT43 218 aa12.15□□□□□ -0.46
ABCA13-207ENST00000544596 CNGB1Q14028 1251 aaPredicted RBP12.09□□□□□ -0.47
ABCA13-207ENST00000544596 SLC4A1APQ9BWU0 796 aaKnown RBP12.05□□□□□ -0.48
ABCA13-207ENST00000544596 NISCHQ9Y2I1 1504 aa12.05□□□□□ -0.48
ABCA13-207ENST00000544596 UBTFP17480 764 aaKnown RBP12.03□□□□□ -0.48
ABCA13-207ENST00000544596 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.98□□□□□ -0.49
ABCA13-207ENST00000544596 HNRNPUL2Q1KMD3 747 aaKnown RBP11.98□□□□□ -0.49
ABCA13-207ENST00000544596 ZEB1P37275 1124 aaPredicted RBP11.92□□□□□ -0.5
ABCA13-207ENST00000544596 CLSPNQ9HAW4 1339 aa11.9□□□□□ -0.5
ABCA13-207ENST00000544596 TRIM41Q8WV44 630 aa11.9□□□□□ -0.5
ABCA13-207ENST00000544596 PPARGC1BQ86YN6 1023 aaKnown RBP11.89□□□□□ -0.51
ABCA13-207ENST00000544596 ITGAEP38570 1179 aa11.89□□□□□ -0.51
ABCA13-207ENST00000544596 ZNF316A6NFI3 1004 aaPredicted RBP11.87□□□□□ -0.51
ABCA13-207ENST00000544596 BCL11AQ9H165 835 aa11.78□□□□□ -0.52
ABCA13-207ENST00000544596 SLC24A1O60721 1099 aa11.78□□□□□ -0.52
ABCA13-207ENST00000544596 RTL5Q5HYW3 569 aaPredicted RBP11.75□□□□□ -0.53
ABCA13-207ENST00000544596 ZBTB47Q9UFB7 747 aaPredicted RBP11.67□□□□□ -0.54
ABCA13-207ENST00000544596 BCANQ96GW7 911 aa11.56□□□□□ -0.56
ABCA13-207ENST00000544596 CANXP27824 592 aaKnown RBP11.47□□□□□ -0.57
ABCA13-207ENST00000544596 TRIM52Q96A61 297 aa11.47□□□□□ -0.57
ABCA13-207ENST00000544596 ZNF326Q5BKZ1 582 aaKnown RBP11.46□□□□□ -0.57
ABCA13-207ENST00000544596 NEFMP07197 916 aa11.41□□□□□ -0.58
ABCA13-207ENST00000544596 FAM50AQ14320 339 aaKnown RBP11.41□□□□□ -0.58
ABCA13-207ENST00000544596 PLPPR3Q6T4P5 718 aa11.4□□□□□ -0.58
ABCA13-207ENST00000544596 HRCP23327 699 aa11.38□□□□□ -0.59
ABCA13-207ENST00000544596 NEUROD1Q13562 356 aa11.38□□□□□ -0.59
ABCA13-207ENST00000544596 TRIM26Q12899 539 aaPredicted RBP11.37□□□□□ -0.59
ABCA13-207ENST00000544596 CDK11AQ9UQ88 783 aaPredicted RBP11.3□□□□□ -0.6
ABCA13-207ENST00000544596 FBLN2P98095 1184 aa11.29□□□□□ -0.6
ABCA13-207ENST00000544596 A0A0G2JS52 829 aa11.29□□□□□ -0.6
ABCA13-207ENST00000544596 EIF5BO60841 1220 aaKnown RBP11.29□□□□□ -0.6
ABCA13-207ENST00000544596 NPM2Q86SE8 214 aaKnown RBP11.27□□□□□ -0.6
ABCA13-207ENST00000544596 HSP90AA1P07900 732 aaKnown RBP11.27□□□□□ -0.61
ABCA13-207ENST00000544596 ANP32BQ92688 251 aaKnown RBP11.26□□□□□ -0.61
ABCA13-207ENST00000544596 CDK11BP21127 795 aaKnown RBP11.25□□□□□ -0.61
ABCA13-207ENST00000544596 ESF1Q9H501 851 aaKnown RBP11.23□□□□□ -0.61
ABCA13-207ENST00000544596 DIEXFQ68CQ4 756 aaKnown RBP11.23□□□□□ -0.61
ABCA13-207ENST00000544596 ANP32CO43423 234 aa11.22□□□□□ -0.61
ABCA13-207ENST00000544596 SCAF1Q9H7N4 1312 aaKnown RBP11.22□□□□□ -0.61
ABCA13-207ENST00000544596 LOC105371045A0A1W2PR82 267 aa11.19□□□□□ -0.62
ABCA13-207ENST00000544596 STAG3Q9UJ98 1225 aa11.18□□□□□ -0.62
ABCA13-207ENST00000544596 ARID3CA6NKF2 412 aa11.17□□□□□ -0.62
ABCA13-207ENST00000544596 TULP1O00294 542 aaPredicted RBP11.17□□□□□ -0.62
ABCA13-207ENST00000544596 ANP32AP39687 249 aaKnown RBP11.16□□□□□ -0.62
ABCA13-207ENST00000544596 CHGAP10645 457 aaKnown RBP11.15□□□□□ -0.62
ABCA13-207ENST00000544596 ARXQ96QS3 562 aa11.15□□□□□ -0.62
ABCA13-207ENST00000544596 PLEKHG5O94827 1062 aa11.15□□□□□ -0.63
ABCA13-207ENST00000544596 ZNF777Q9ULD5 760 aaPredicted RBP11.09□□□□□ -0.63
ABCA13-207ENST00000544596 NCBP3Q53F19 620 aaKnown RBP11.08□□□□□ -0.64
ABCA13-207ENST00000544596 UPF2Q9HAU5 1272 aaKnown RBP11.07□□□□□ -0.64
ABCA13-207ENST00000544596 ZBTB7CA1YPR0 619 aa11.07□□□□□ -0.64
ABCA13-207ENST00000544596 GTF3C3Q9Y5Q9 886 aa11.06□□□□□ -0.64
ABCA13-207ENST00000544596 SALL2Q9Y467 1007 aaPredicted RBP11.05□□□□□ -0.64
ABCA13-207ENST00000544596 GLIPR1L2Q4G1C9 344 aa11.01□□□□□ -0.65
ABCA13-207ENST00000544596 P3H3Q8IVL6 736 aa10.99□□□□□ -0.65
ABCA13-207ENST00000544596 SENP3Q9H4L4 574 aaPredicted RBP10.99□□□□□ -0.65
ABCA13-207ENST00000544596 C14orf37Q86TY3 774 aa10.98□□□□□ -0.65
ABCA13-207ENST00000544596 TPRNQ4KMQ1 711 aa10.94□□□□□ -0.66
ABCA13-207ENST00000544596 NBR1Q14596 966 aa10.93□□□□□ -0.66
ABCA13-207ENST00000544596 TAOK2Q9UL54 1235 aa10.93□□□□□ -0.66
ABCA13-207ENST00000544596 HAP1P54257 671 aaPredicted RBP10.92□□□□□ -0.66
ABCA13-207ENST00000544596 FAM9BQ8IZU0 186 aa10.9□□□□□ -0.66
ABCA13-207ENST00000544596 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.9□□□□□ -0.66
ABCA13-207ENST00000544596 NPM1P06748 294 aaKnown RBP eCLIP10.9□□□□□ -0.67
ABCA13-207ENST00000544596 MYH16Q9H6N6 1097 aa10.89□□□□□ -0.67
ABCA13-207ENST00000544596 PABPN1Q86U42 306 aaKnown RBP eCLIP10.88□□□□□ -0.67
ABCA13-207ENST00000544596 NPHP1O15259 732 aa10.88□□□□□ -0.67
ABCA13-207ENST00000544596 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.88□□□□□ -0.67
ABCA13-207ENST00000544596 FKBP8Q14318 412 aa10.87□□□□□ -0.67
ABCA13-207ENST00000544596 ZRSR1Q15695 479 aaKnown RBP10.86□□□□□ -0.67
ABCA13-207ENST00000544596 NCLP19338 710 aaKnown RBP10.86□□□□□ -0.67
ABCA13-207ENST00000544596 CLSTN1O94985 981 aa10.85□□□□□ -0.67
ABCA13-207ENST00000544596 HNRNPUQ00839 825 aaKnown RBP eCLIP10.84□□□□□ -0.67
ABCA13-207ENST00000544596 WDR43Q15061 677 aaKnown RBP eCLIP10.84□□□□□ -0.67
ABCA13-207ENST00000544596 CCDC136Q96JN2 1154 aa10.82□□□□□ -0.68
ABCA13-207ENST00000544596 TMC1Q8TDI8 760 aa10.8□□□□□ -0.68
ABCA13-207ENST00000544596 TRIM44Q96DX7 344 aaPredicted RBP10.79□□□□□ -0.68
ABCA13-207ENST00000544596 PTMAP06454 111 aaKnown RBP10.79□□□□□ -0.68
ABCA13-207ENST00000544596 DNTTIP2Q5QJE6 756 aaKnown RBP10.78□□□□□ -0.68
ABCA13-207ENST00000544596 KDM2AQ9Y2K7 1162 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms