RNA–Protein interactions for RNA: ENST00000485763.1

XRCC5-209, Transcript of X-ray repair cross complementing 5, humanhuman

TSL 2

Gene XRCC5, Length 616 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC5-209ENST00000485763 AEBP2Q6ZN18 517 aaPredicted RBP23.91■■□□□ 1.42
XRCC5-209ENST00000485763 CHIC1Q5VXU3 224 aa23.46■■□□□ 1.35
XRCC5-209ENST00000485763 PHF23Q9BUL5 403 aaPredicted RBP20.63■□□□□ 0.89
XRCC5-209ENST00000485763 SENP3Q9H4L4 574 aaPredicted RBP20.32■□□□□ 0.84
XRCC5-209ENST00000485763 PLPPR3Q6T4P5 718 aa19.13■□□□□ 0.65
XRCC5-209ENST00000485763 FOXD1Q16676 465 aa18.83■□□□□ 0.6
XRCC5-209ENST00000485763 ADRA2BP18089 450 aa18.23■□□□□ 0.51
XRCC5-209ENST00000485763 PPP6R1Q9UPN7 881 aa18.19■□□□□ 0.5
XRCC5-209ENST00000485763 PIAS4Q8N2W9 510 aaPredicted RBP17.85■□□□□ 0.45
XRCC5-209ENST00000485763 MSH5O43196 834 aa17.34■□□□□ 0.37
XRCC5-209ENST00000485763 NISCHQ9Y2I1 1504 aa16.98■□□□□ 0.31
XRCC5-209ENST00000485763 PPP4R3CPQ6ZMV5 832 aa16.88■□□□□ 0.29
XRCC5-209ENST00000485763 SCAF1Q9H7N4 1312 aaKnown RBP16.7■□□□□ 0.26
XRCC5-209ENST00000485763 KCNA4P22459 653 aa16.61■□□□□ 0.25
XRCC5-209ENST00000485763 MAPK8IP2Q13387 824 aaPredicted RBP16.51■□□□□ 0.23
XRCC5-209ENST00000485763 NCBP3Q53F19 620 aaKnown RBP16.5■□□□□ 0.23
XRCC5-209ENST00000485763 CNKSR2Q8WXI2 1034 aa16.37■□□□□ 0.21
XRCC5-209ENST00000485763 NPM3O75607 178 aaKnown RBP16.21■□□□□ 0.19
XRCC5-209ENST00000485763 DMRT2Q9Y5R5 561 aa16.2■□□□□ 0.18
XRCC5-209ENST00000485763 RNF216Q9NWF9 866 aaPredicted RBP16■□□□□ 0.15
XRCC5-209ENST00000485763 HOXD11P31277 338 aaPredicted RBP15.88■□□□□ 0.13
XRCC5-209ENST00000485763 SLC4A1APQ9BWU0 796 aaKnown RBP15.87■□□□□ 0.13
XRCC5-209ENST00000485763 DCAF8L1A6NGE4 600 aa15.68■□□□□ 0.1
XRCC5-209ENST00000485763 POTEDQ86YR6 584 aa15.61■□□□□ 0.09
XRCC5-209ENST00000485763 EHMT2Q96KQ7 1210 aa15.61■□□□□ 0.09
XRCC5-209ENST00000485763 DNAJC5BQ9UF47 199 aa15.57■□□□□ 0.08
XRCC5-209ENST00000485763 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.27■□□□□ 0.045e-12■■■■■ 26.8
XRCC5-209ENST00000485763 SLC4A2P04920 1241 aa15.26■□□□□ 0.03
XRCC5-209ENST00000485763 CSRNP3Q8WYN3 585 aa15.26■□□□□ 0.03
XRCC5-209ENST00000485763 ZBTB22O15209 634 aa15.25■□□□□ 0.03
XRCC5-209ENST00000485763 FOXD4L1Q9NU39 408 aa15.25■□□□□ 0.03
XRCC5-209ENST00000485763 CCDC180Q9P1Z9 1646 aa15.22■□□□□ 0.03
XRCC5-209ENST00000485763 MYCNP04198 464 aaPredicted RBP14.99□□□□□ -0.01
XRCC5-209ENST00000485763 U3KPZ7 1027 aaPredicted RBP14.95□□□□□ -0.02
XRCC5-209ENST00000485763 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.83□□□□□ -0.04
XRCC5-209ENST00000485763 HNRNPUL2Q1KMD3 747 aaKnown RBP14.83□□□□□ -0.04
XRCC5-209ENST00000485763 RNF39Q9H2S5 420 aa14.83□□□□□ -0.04
XRCC5-209ENST00000485763 SAMD1Q6SPF0 538 aaPredicted RBP14.78□□□□□ -0.04
XRCC5-209ENST00000485763 ABCC9O60706 1549 aa14.69□□□□□ -0.06
XRCC5-209ENST00000485763 C1QBPQ07021 282 aaKnown RBP14.68□□□□□ -0.06
XRCC5-209ENST00000485763 ATXN8OSP0DMR3 200 aa14.66□□□□□ -0.06
XRCC5-209ENST00000485763 APLP2Q06481 763 aa14.66□□□□□ -0.06
XRCC5-209ENST00000485763 ATF5Q9Y2D1 282 aaPredicted RBP14.57□□□□□ -0.08
XRCC5-209ENST00000485763 CAPN15O75808 1086 aa14.54□□□□□ -0.08
XRCC5-209ENST00000485763 SPINK5Q9NQ38 1064 aaPredicted RBP14.53□□□□□ -0.08
XRCC5-209ENST00000485763 TRHP20396 242 aaPredicted RBP14.5□□□□□ -0.09
XRCC5-209ENST00000485763 CACNB1Q02641 598 aaPredicted RBP14.48□□□□□ -0.09
XRCC5-209ENST00000485763 ZNF219Q9P2Y4 722 aaPredicted RBP14.42□□□□□ -0.1
XRCC5-209ENST00000485763 ABCB7O75027 752 aa14.27□□□□□ -0.13
XRCC5-209ENST00000485763 POLA2Q14181 598 aa14.24□□□□□ -0.13
XRCC5-209ENST00000485763 ZCCHC6Q5VYS8 1495 aaKnown RBP14.2□□□□□ -0.14
XRCC5-209ENST00000485763 RB1CC1Q8TDY2 1594 aa14.2□□□□□ -0.14
XRCC5-209ENST00000485763 DSG3P32926 999 aa14.17□□□□□ -0.14
XRCC5-209ENST00000485763 NACADO15069 1562 aa14.17□□□□□ -0.14
XRCC5-209ENST00000485763 UNC13AQ9UPW8 1703 aa14.1□□□□□ -0.15
XRCC5-209ENST00000485763 MYO15BQ96JP2 1530 aa14.08□□□□□ -0.16
XRCC5-209ENST00000485763 DCAF1Q9Y4B6 1507 aa14.05□□□□□ -0.16
XRCC5-209ENST00000485763 FBLN2P98095 1184 aa14.02□□□□□ -0.17
XRCC5-209ENST00000485763 ZBTB12Q9Y330 459 aaPredicted RBP13.99□□□□□ -0.17
XRCC5-209ENST00000485763 DCAF8L2P0C7V8 631 aa13.96□□□□□ -0.17
XRCC5-209ENST00000485763 MKRN4PQ13434 485 aaPredicted RBP13.93□□□□□ -0.18
XRCC5-209ENST00000485763 SCRIBQ14160 1630 aa13.86□□□□□ -0.19
XRCC5-209ENST00000485763 FKBP8Q14318 412 aa13.86□□□□□ -0.19
XRCC5-209ENST00000485763 BICRAQ9NZM4 1560 aa13.82□□□□□ -0.2
XRCC5-209ENST00000485763 OSCARQ8IYS5 282 aa13.75□□□□□ -0.21
XRCC5-209ENST00000485763 SPDYE4A6NLX3 237 aa13.73□□□□□ -0.21
XRCC5-209ENST00000485763 PABPN1Q86U42 306 aaKnown RBP eCLIP13.62□□□□□ -0.232e-11■■■□□ 16.3
XRCC5-209ENST00000485763 ZNF692Q9BU19 519 aaPredicted RBP13.62□□□□□ -0.23
XRCC5-209ENST00000485763 SHROOM4Q9ULL8 1493 aa13.61□□□□□ -0.23
XRCC5-209ENST00000485763 SPDYE2BA6NHP3 402 aa13.6□□□□□ -0.23
XRCC5-209ENST00000485763 SPDYE6P0CI01 402 aa13.6□□□□□ -0.23
XRCC5-209ENST00000485763 SPDYE2Q495Y8 402 aa13.6□□□□□ -0.23
XRCC5-209ENST00000485763 RBM42Q9BTD8 480 aaKnown RBP13.53□□□□□ -0.24
XRCC5-209ENST00000485763 SSUH2Q9Y2M2 353 aa13.47□□□□□ -0.25
XRCC5-209ENST00000485763 EIF4G1Q04637 1599 aaKnown RBP13.41□□□□□ -0.26
XRCC5-209ENST00000485763 PROM2Q8N271 834 aa13.38□□□□□ -0.27
XRCC5-209ENST00000485763 AKT1S1Q96B36 256 aa13.37□□□□□ -0.27
XRCC5-209ENST00000485763 CC2D2AQ9P2K1 1620 aa13.36□□□□□ -0.27
XRCC5-209ENST00000485763 FBXO3Q9UK99 471 aa13.32□□□□□ -0.28
XRCC5-209ENST00000485763 SMARCA4P51532 1647 aa13.25□□□□□ -0.29
XRCC5-209ENST00000485763 REM2Q8IYK8 340 aaPredicted RBP13.25□□□□□ -0.29
XRCC5-209ENST00000485763 STAG3Q9UJ98 1225 aa13.22□□□□□ -0.29
XRCC5-209ENST00000485763 CLEC11AQ9Y240 323 aa13.22□□□□□ -0.29
XRCC5-209ENST00000485763 CECR2Q9BXF3 1484 aa13.22□□□□□ -0.29
XRCC5-209ENST00000485763 SPDYE1Q8NFV5 336 aaPredicted RBP13.21□□□□□ -0.29
XRCC5-209ENST00000485763 BAZ1AQ9NRL2 1556 aaPredicted RBP13.17□□□□□ -0.3
XRCC5-209ENST00000485763 VASPP50552 380 aaPredicted RBP13.13□□□□□ -0.31
XRCC5-209ENST00000485763 MROH2BQ7Z745 1585 aa13.11□□□□□ -0.31
XRCC5-209ENST00000485763 PITPNM1O00562 1244 aa13.1□□□□□ -0.31
XRCC5-209ENST00000485763 SMARCA2P51531 1590 aa13.09□□□□□ -0.31
XRCC5-209ENST00000485763 PEG3Q9GZU2 1588 aa13.08□□□□□ -0.32
XRCC5-209ENST00000485763 PRR29P0C7W0 189 aa13.08□□□□□ -0.32
XRCC5-209ENST00000485763 PLCD3Q8N3E9 789 aa13.07□□□□□ -0.32
XRCC5-209ENST00000485763 MIER1Q8N108 512 aa13.06□□□□□ -0.32
XRCC5-209ENST00000485763 HMGXB3Q12766 1538 aa13.06□□□□□ -0.32
XRCC5-209ENST00000485763 ATAD2BQ9ULI0 1458 aa13.05□□□□□ -0.32
XRCC5-209ENST00000485763 WIZO95785 1651 aa13.05□□□□□ -0.32
XRCC5-209ENST00000485763 NCAPD3P42695 1498 aa13□□□□□ -0.33
XRCC5-209ENST00000485763 PLEKHG5O94827 1062 aa13□□□□□ -0.33
XRCC5-209ENST00000485763 KLHL34Q8N239 644 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms