RNA–Protein interactions for RNA: ENST00000465892.6

TGFBR3-204, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TGFBR3, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-204ENST00000465892 NISCHQ9Y2I1 1504 aa26.29■■□□□ 1.8
TGFBR3-204ENST00000465892 SHROOM4Q9ULL8 1493 aa23.72■■□□□ 1.39
TGFBR3-204ENST00000465892 SUPT5HO00267 1087 aaKnown RBP23.61■■□□□ 1.37
TGFBR3-204ENST00000465892 HRCP23327 699 aa23.55■■□□□ 1.36
TGFBR3-204ENST00000465892 PPARGC1BQ86YN6 1023 aaKnown RBP23.35■■□□□ 1.33
TGFBR3-204ENST00000465892 PCGF6Q9BYE7 350 aa23.33■■□□□ 1.33
TGFBR3-204ENST00000465892 MYO15BQ96JP2 1530 aa23.13■■□□□ 1.29
TGFBR3-204ENST00000465892 CHIC1Q5VXU3 224 aa23■■□□□ 1.27
TGFBR3-204ENST00000465892 LOC105371045A0A1W2PR82 267 aa22.66■■□□□ 1.22
TGFBR3-204ENST00000465892 DCAF8L2P0C7V8 631 aa22.49■■□□□ 1.19
TGFBR3-204ENST00000465892 PELP1Q8IZL8 1130 aaKnown RBP22.4■■□□□ 1.18
TGFBR3-204ENST00000465892 TRIM26Q12899 539 aaPredicted RBP22.38■■□□□ 1.17
TGFBR3-204ENST00000465892 DCAF1Q9Y4B6 1507 aa22.37■■□□□ 1.17
TGFBR3-204ENST00000465892 SCAF1Q9H7N4 1312 aaKnown RBP22.34■■□□□ 1.17
TGFBR3-204ENST00000465892 ZCCHC6Q5VYS8 1495 aaKnown RBP22.32■■□□□ 1.16
TGFBR3-204ENST00000465892 CCDC180Q9P1Z9 1646 aa22.06■■□□□ 1.12
TGFBR3-204ENST00000465892 ZEB1P37275 1124 aaPredicted RBP22.05■■□□□ 1.12
TGFBR3-204ENST00000465892 EHMT2Q96KQ7 1210 aa22.01■■□□□ 1.11
TGFBR3-204ENST00000465892 FAM9AQ8IZU1 332 aaPredicted RBP21.91■■□□□ 1.1
TGFBR3-204ENST00000465892 NEUROD1Q13562 356 aa21.79■■□□□ 1.08
TGFBR3-204ENST00000465892 ACIN1Q9UKV3 1341 aaKnown RBP21.74■■□□□ 1.07
TGFBR3-204ENST00000465892 TRIM41Q8WV44 630 aa21.7■■□□□ 1.06
TGFBR3-204ENST00000465892 GTF3C3Q9Y5Q9 886 aa21.68■■□□□ 1.06
TGFBR3-204ENST00000465892 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.66■■□□□ 1.06
TGFBR3-204ENST00000465892 CCER1Q8TC90 406 aaPredicted RBP21.55■■□□□ 1.04
TGFBR3-204ENST00000465892 DIEXFQ68CQ4 756 aaKnown RBP21.49■■□□□ 1.03
TGFBR3-204ENST00000465892 CENPBP07199 599 aaPredicted RBP21.45■■□□□ 1.02
TGFBR3-204ENST00000465892 TTBK1Q5TCY1 1321 aaPredicted RBP21.42■■□□□ 1.02
TGFBR3-204ENST00000465892 MYT1Q01538 1121 aa21.4■■□□□ 1.02
TGFBR3-204ENST00000465892 YTHDC1Q96MU7 727 aaKnown RBP21.34■■□□□ 1.01
TGFBR3-204ENST00000465892 RSF1Q96T23 1441 aaPredicted RBP21.25■□□□□ 0.99
TGFBR3-204ENST00000465892 RB1CC1Q8TDY2 1594 aa21.18■□□□□ 0.98
TGFBR3-204ENST00000465892 ABCC9O60706 1549 aa21.18■□□□□ 0.98
TGFBR3-204ENST00000465892 ZNF316A6NFI3 1004 aaPredicted RBP21.01■□□□□ 0.95
TGFBR3-204ENST00000465892 SCRIBQ14160 1630 aa20.99■□□□□ 0.95
TGFBR3-204ENST00000465892 MIER1Q8N108 512 aa20.98■□□□□ 0.95
TGFBR3-204ENST00000465892 HNRNPUL2Q1KMD3 747 aaKnown RBP20.76■□□□□ 0.91
TGFBR3-204ENST00000465892 CECR2Q9BXF3 1484 aa20.76■□□□□ 0.91
TGFBR3-204ENST00000465892 CEP162Q5TB80 1403 aa20.67■□□□□ 0.9
TGFBR3-204ENST00000465892 UBTFP17480 764 aaKnown RBP20.67■□□□□ 0.9
TGFBR3-204ENST00000465892 MROH2BQ7Z745 1585 aa20.65■□□□□ 0.9
TGFBR3-204ENST00000465892 WRNQ14191 1432 aaPredicted RBP eCLIP20.6■□□□□ 0.89
TGFBR3-204ENST00000465892 WIZO95785 1651 aa20.6■□□□□ 0.89
TGFBR3-204ENST00000465892 SUPT16HQ9Y5B9 1047 aaKnown RBP20.57■□□□□ 0.88
TGFBR3-204ENST00000465892 CCDC88BA6NC98 1476 aa20.56■□□□□ 0.88
TGFBR3-204ENST00000465892 ABCC8Q09428 1581 aa20.55■□□□□ 0.88
TGFBR3-204ENST00000465892 SOGA1O94964 1423 aa20.53■□□□□ 0.88
TGFBR3-204ENST00000465892 TSHZ2Q9NRE2 1034 aa20.46■□□□□ 0.87
TGFBR3-204ENST00000465892 TNIKQ9UKE5 1360 aa20.45■□□□□ 0.86
TGFBR3-204ENST00000465892 RANGAP1P46060 587 aaPredicted RBP20.45■□□□□ 0.86
TGFBR3-204ENST00000465892 CSRNP3Q8WYN3 585 aa20.43■□□□□ 0.86
TGFBR3-204ENST00000465892 RUSC2Q8N2Y8 1516 aa20.43■□□□□ 0.86
TGFBR3-204ENST00000465892 ANP32EQ9BTT0 268 aa20.41■□□□□ 0.86
TGFBR3-204ENST00000465892 BCL11AQ9H165 835 aa20.38■□□□□ 0.85
TGFBR3-204ENST00000465892 BCANQ96GW7 911 aa20.37■□□□□ 0.85
TGFBR3-204ENST00000465892 EIF4G1Q04637 1599 aaKnown RBP20.33■□□□□ 0.84
TGFBR3-204ENST00000465892 KCNH8Q96L42 1107 aa20.28■□□□□ 0.84
TGFBR3-204ENST00000465892 APLP2Q06481 763 aa20.27■□□□□ 0.84
TGFBR3-204ENST00000465892 BAZ1AQ9NRL2 1556 aaPredicted RBP20.26■□□□□ 0.83
TGFBR3-204ENST00000465892 CLSPNQ9HAW4 1339 aa20.2■□□□□ 0.83
TGFBR3-204ENST00000465892 GOLGA3Q08378 1498 aa20.19■□□□□ 0.82
TGFBR3-204ENST00000465892 FKBP8Q14318 412 aa20.13■□□□□ 0.81
TGFBR3-204ENST00000465892 CLIP1P30622 1438 aa20.13■□□□□ 0.81
TGFBR3-204ENST00000465892 NACADO15069 1562 aa20.1■□□□□ 0.81
TGFBR3-204ENST00000465892 DHX57Q6P158 1386 aaKnown RBP20.09■□□□□ 0.81
TGFBR3-204ENST00000465892 EEA1Q15075 1411 aa20.09■□□□□ 0.81
TGFBR3-204ENST00000465892 ITGAEP38570 1179 aa20.06■□□□□ 0.8
TGFBR3-204ENST00000465892 SMARCA2P51531 1590 aa20.04■□□□□ 0.8
TGFBR3-204ENST00000465892 VPS8Q8N3P4 1428 aa20.03■□□□□ 0.8
TGFBR3-204ENST00000465892 TOP2AP11388 1531 aaKnown RBP20.03■□□□□ 0.8
TGFBR3-204ENST00000465892 RBM19Q9Y4C8 960 aaKnown RBP20.01■□□□□ 0.79
TGFBR3-204ENST00000465892 CEP164Q9UPV0 1460 aa19.97■□□□□ 0.79
TGFBR3-204ENST00000465892 KANK4Q5T7N3 995 aaPredicted RBP19.96■□□□□ 0.79
TGFBR3-204ENST00000465892 DDX10Q13206 875 aaKnown RBP19.95■□□□□ 0.78
TGFBR3-204ENST00000465892 TRIM52Q96A61 297 aa19.93■□□□□ 0.78
TGFBR3-204ENST00000465892 RAPGEF2Q9Y4G8 1499 aa19.91■□□□□ 0.78
TGFBR3-204ENST00000465892 HIRIP3Q9BW71 556 aaPredicted RBP19.89■□□□□ 0.78
TGFBR3-204ENST00000465892 NEFLP07196 543 aa19.88■□□□□ 0.77
TGFBR3-204ENST00000465892 KIF21BO75037 1637 aa19.85■□□□□ 0.77
TGFBR3-204ENST00000465892 SMARCA4P51532 1647 aa19.85■□□□□ 0.77
TGFBR3-204ENST00000465892 MSH5O43196 834 aa19.84■□□□□ 0.77
TGFBR3-204ENST00000465892 SYNJ1O43426 1573 aa19.8■□□□□ 0.76
TGFBR3-204ENST00000465892 IRX6P78412 446 aaPredicted RBP19.75■□□□□ 0.75
TGFBR3-204ENST00000465892 SIN3AQ96ST3 1273 aa19.75■□□□□ 0.75
TGFBR3-204ENST00000465892 PABPN1Q86U42 306 aaKnown RBP eCLIP19.69■□□□□ 0.74
TGFBR3-204ENST00000465892 BAZ1BQ9UIG0 1483 aaKnown RBP19.69■□□□□ 0.74
TGFBR3-204ENST00000465892 ERICH6Q7L0X2 663 aa19.68■□□□□ 0.74
TGFBR3-204ENST00000465892 RAB3GAP2Q9H2M9 1393 aa19.66■□□□□ 0.74
TGFBR3-204ENST00000465892 CCNB3Q8WWL7 1395 aa19.65■□□□□ 0.74
TGFBR3-204ENST00000465892 PPP1R15AO75807 674 aaPredicted RBP19.63■□□□□ 0.73
TGFBR3-204ENST00000465892 ARAP1Q96P48 1450 aa19.63■□□□□ 0.73
TGFBR3-204ENST00000465892 ANP32CO43423 234 aa19.63■□□□□ 0.73
TGFBR3-204ENST00000465892 RRBP1Q9P2E9 1410 aaKnown RBP19.61■□□□□ 0.73
TGFBR3-204ENST00000465892 WDR97A6NE52 1622 aa19.61■□□□□ 0.73
TGFBR3-204ENST00000465892 MAPKBP1O60336 1514 aa19.57■□□□□ 0.72
TGFBR3-204ENST00000465892 CDK11AQ9UQ88 783 aaPredicted RBP19.56■□□□□ 0.72
TGFBR3-204ENST00000465892 FAM50AQ14320 339 aaKnown RBP19.54■□□□□ 0.72
TGFBR3-204ENST00000465892 HNRNPUQ00839 825 aaKnown RBP eCLIP19.53■□□□□ 0.725e-6■□□□□ 10.8
TGFBR3-204ENST00000465892 CCER2I3L3R5 266 aa19.5■□□□□ 0.71
TGFBR3-204ENST00000465892 CUX2O14529 1486 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms