RNA–Protein interactions for RNA: ENST00000466525.1

GAPDH-206, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 5

Gene GAPDH, Length 1,720 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-206ENST00000466525 NISCHQ9Y2I1 1504 aa30.68■■■□□ 2.5
GAPDH-206ENST00000466525 ABCC9O60706 1549 aa28.1■■■□□ 2.09
GAPDH-206ENST00000466525 CCDC180Q9P1Z9 1646 aa27.74■■■□□ 2.03
GAPDH-206ENST00000466525 DNAJC5BQ9UF47 199 aa26.73■■□□□ 1.87
GAPDH-206ENST00000466525 RB1CC1Q8TDY2 1594 aa26.66■■□□□ 1.86
GAPDH-206ENST00000466525 NACADO15069 1562 aa26.4■■□□□ 1.82
GAPDH-206ENST00000466525 PABPN1Q86U42 306 aaKnown RBP eCLIP26.1■■□□□ 1.77
GAPDH-206ENST00000466525 DCAF8L2P0C7V8 631 aa26.09■■□□□ 1.77
GAPDH-206ENST00000466525 MYO15BQ96JP2 1530 aa25.95■■□□□ 1.74
GAPDH-206ENST00000466525 ZCCHC6Q5VYS8 1495 aaKnown RBP25.87■■□□□ 1.73
GAPDH-206ENST00000466525 UNC13AQ9UPW8 1703 aa25.85■■□□□ 1.73
GAPDH-206ENST00000466525 BICRAQ9NZM4 1560 aa25.77■■□□□ 1.72
GAPDH-206ENST00000466525 SHROOM4Q9ULL8 1493 aa25.63■■□□□ 1.69
GAPDH-206ENST00000466525 CECR2Q9BXF3 1484 aa25.44■■□□□ 1.66
GAPDH-206ENST00000466525 DCAF1Q9Y4B6 1507 aa25.41■■□□□ 1.66
GAPDH-206ENST00000466525 CC2D2AQ9P2K1 1620 aa25.38■■□□□ 1.65
GAPDH-206ENST00000466525 SUPT5HO00267 1087 aaKnown RBP25.33■■□□□ 1.65
GAPDH-206ENST00000466525 EIF4G1Q04637 1599 aaKnown RBP25.23■■□□□ 1.63
GAPDH-206ENST00000466525 SCRIBQ14160 1630 aa25.12■■□□□ 1.61
GAPDH-206ENST00000466525 CHIC1Q5VXU3 224 aa25.06■■□□□ 1.6
GAPDH-206ENST00000466525 DNAJC5Q9H3Z4 198 aa25.06■■□□□ 1.6
GAPDH-206ENST00000466525 HRCP23327 699 aa24.96■■□□□ 1.59
GAPDH-206ENST00000466525 CUX2O14529 1486 aa24.56■■□□□ 1.52
GAPDH-206ENST00000466525 PCGF6Q9BYE7 350 aa24.44■■□□□ 1.5
GAPDH-206ENST00000466525 ERCC6Q03468 1493 aa24.39■■□□□ 1.49
GAPDH-206ENST00000466525 NCAPD3P42695 1498 aa24.38■■□□□ 1.49
GAPDH-206ENST00000466525 TRIM26Q12899 539 aaPredicted RBP24.18■■□□□ 1.46
GAPDH-206ENST00000466525 ATAD2BQ9ULI0 1458 aa24.18■■□□□ 1.46
GAPDH-206ENST00000466525 SMARCA2P51531 1590 aa24.14■■□□□ 1.45
GAPDH-206ENST00000466525 HMGXB3Q12766 1538 aa24.12■■□□□ 1.45
GAPDH-206ENST00000466525 RSF1Q96T23 1441 aaPredicted RBP24.12■■□□□ 1.45
GAPDH-206ENST00000466525 LOC105371045A0A1W2PR82 267 aa24.1■■□□□ 1.45
GAPDH-206ENST00000466525 PPARGC1BQ86YN6 1023 aaKnown RBP24.01■■□□□ 1.43
GAPDH-206ENST00000466525 ZEB1P37275 1124 aaPredicted RBP23.98■■□□□ 1.43
GAPDH-206ENST00000466525 SMARCA4P51532 1647 aa23.98■■□□□ 1.43
GAPDH-206ENST00000466525 NESP48681 1621 aa23.96■■□□□ 1.43
GAPDH-206ENST00000466525 BAZ1BQ9UIG0 1483 aaKnown RBP23.93■■□□□ 1.42
GAPDH-206ENST00000466525 BAZ1AQ9NRL2 1556 aaPredicted RBP23.89■■□□□ 1.41
GAPDH-206ENST00000466525 LAMC3Q9Y6N6 1575 aa23.87■■□□□ 1.41
GAPDH-206ENST00000466525 THOC2Q8NI27 1593 aaKnown RBP23.84■■□□□ 1.41
GAPDH-206ENST00000466525 PEG3Q9GZU2 1588 aa23.83■■□□□ 1.4
GAPDH-206ENST00000466525 PDS5BQ9NTI5 1447 aa23.82■■□□□ 1.4
GAPDH-206ENST00000466525 TRIM41Q8WV44 630 aa23.76■■□□□ 1.39
GAPDH-206ENST00000466525 KIF21AQ7Z4S6 1674 aa23.62■■□□□ 1.37
GAPDH-206ENST00000466525 CADPSQ9ULU8 1353 aa23.61■■□□□ 1.37
GAPDH-206ENST00000466525 MRC2Q9UBG0 1479 aa23.56■■□□□ 1.36
GAPDH-206ENST00000466525 MROH2BQ7Z745 1585 aa23.55■■□□□ 1.36
GAPDH-206ENST00000466525 WDR62O43379 1518 aa23.49■■□□□ 1.35
GAPDH-206ENST00000466525 PELP1Q8IZL8 1130 aaKnown RBP23.45■■□□□ 1.34
GAPDH-206ENST00000466525 WIZO95785 1651 aa23.44■■□□□ 1.34
GAPDH-206ENST00000466525 OSCARQ8IYS5 282 aa23.39■■□□□ 1.34
GAPDH-206ENST00000466525 CEP164Q9UPV0 1460 aa23.38■■□□□ 1.33
GAPDH-206ENST00000466525 FAM9AQ8IZU1 332 aaPredicted RBP23.29■■□□□ 1.32
GAPDH-206ENST00000466525 FANCD2Q9BXW9 1451 aa23.29■■□□□ 1.32
GAPDH-206ENST00000466525 WRNQ14191 1432 aaPredicted RBP eCLIP23.25■■□□□ 1.31
GAPDH-206ENST00000466525 TOP2AP11388 1531 aaKnown RBP23.25■■□□□ 1.31
GAPDH-206ENST00000466525 CFTRP13569 1480 aa23.22■■□□□ 1.31
GAPDH-206ENST00000466525 EEA1Q15075 1411 aa23.11■■□□□ 1.29
GAPDH-206ENST00000466525 SCAF1Q9H7N4 1312 aaKnown RBP23.07■■□□□ 1.28
GAPDH-206ENST00000466525 URB2Q14146 1524 aaKnown RBP23.06■■□□□ 1.28
GAPDH-206ENST00000466525 TNIKQ9UKE5 1360 aa23.01■■□□□ 1.27
GAPDH-206ENST00000466525 CCDC88BA6NC98 1476 aa23■■□□□ 1.27
GAPDH-206ENST00000466525 IFT140Q96RY7 1462 aa22.96■■□□□ 1.27
GAPDH-206ENST00000466525 RIMBP3CA6NJZ7 1639 aa22.96■■□□□ 1.27
GAPDH-206ENST00000466525 RIMBP3BA6NNM3 1639 aa22.96■■□□□ 1.27
GAPDH-206ENST00000466525 RIMBP3Q9UFD9 1639 aa22.96■■□□□ 1.27
GAPDH-206ENST00000466525 CEP162Q5TB80 1403 aa22.95■■□□□ 1.27
GAPDH-206ENST00000466525 ABCC8Q09428 1581 aa22.94■■□□□ 1.26
GAPDH-206ENST00000466525 CCER1Q8TC90 406 aaPredicted RBP22.92■■□□□ 1.26
GAPDH-206ENST00000466525 ARHGEF11O15085 1522 aa22.89■■□□□ 1.25
GAPDH-206ENST00000466525 ACIN1Q9UKV3 1341 aaKnown RBP22.87■■□□□ 1.25
GAPDH-206ENST00000466525 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.85■■□□□ 1.25
GAPDH-206ENST00000466525 PRDM2Q13029 1718 aa22.85■■□□□ 1.25
GAPDH-206ENST00000466525 EHMT2Q96KQ7 1210 aa22.84■■□□□ 1.25
GAPDH-206ENST00000466525 ZNF608Q9ULD9 1512 aaPredicted RBP22.83■■□□□ 1.24
GAPDH-206ENST00000466525 GOLGA3Q08378 1498 aa22.81■■□□□ 1.24
GAPDH-206ENST00000466525 CYB5RLQ6IPT4 315 aa22.79■■□□□ 1.24
GAPDH-206ENST00000466525 TOPBP1Q92547 1522 aa22.78■■□□□ 1.24
GAPDH-206ENST00000466525 SOGA1O94964 1423 aa22.78■■□□□ 1.24
GAPDH-206ENST00000466525 KIF21BO75037 1637 aa22.75■■□□□ 1.23
GAPDH-206ENST00000466525 CSRNP3Q8WYN3 585 aa22.75■■□□□ 1.23
GAPDH-206ENST00000466525 CENPBP07199 599 aaPredicted RBP22.74■■□□□ 1.23
GAPDH-206ENST00000466525 DIEXFQ68CQ4 756 aaKnown RBP22.74■■□□□ 1.23
GAPDH-206ENST00000466525 TRHP20396 242 aaPredicted RBP22.71■■□□□ 1.23
GAPDH-206ENST00000466525 EIF4G3O43432 1585 aaKnown RBP22.68■■□□□ 1.22
GAPDH-206ENST00000466525 DNMBPQ6XZF7 1577 aa22.67■■□□□ 1.22
GAPDH-206ENST00000466525 NEUROD1Q13562 356 aa22.65■■□□□ 1.22
GAPDH-206ENST00000466525 RUSC2Q8N2Y8 1516 aa22.62■■□□□ 1.21
GAPDH-206ENST00000466525 FBLN2P98095 1184 aa22.61■■□□□ 1.21
GAPDH-206ENST00000466525 AQRO60306 1485 aaKnown RBP eCLIP22.6■■□□□ 1.212e-13■■■■■ 32.6
GAPDH-206ENST00000466525 ARAP1Q96P48 1450 aa22.6■■□□□ 1.21
GAPDH-206ENST00000466525 ZNF316A6NFI3 1004 aaPredicted RBP22.57■■□□□ 1.2
GAPDH-206ENST00000466525 TARBP1Q13395 1621 aaKnown RBP22.57■■□□□ 1.2
GAPDH-206ENST00000466525 CHD1O14646 1710 aa22.56■■□□□ 1.2
GAPDH-206ENST00000466525 SYNJ1O43426 1573 aa22.52■■□□□ 1.2
GAPDH-206ENST00000466525 POLA1P09884 1462 aaPredicted RBP22.51■■□□□ 1.19
GAPDH-206ENST00000466525 UBTFP17480 764 aaKnown RBP22.51■■□□□ 1.19
GAPDH-206ENST00000466525 VPS8Q8N3P4 1428 aa22.49■■□□□ 1.19
GAPDH-206ENST00000466525 MYT1Q01538 1121 aa22.48■■□□□ 1.19
GAPDH-206ENST00000466525 WDR97A6NE52 1622 aa22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms