RNA–Protein interactions for RNA: ENST00000458695.6

RBBP4-206, Transcript of RB binding protein 4, chromatin remodeling factor, humanhuman

TSL 2 BASIC

Gene RBBP4, Length 1,674 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP4-206ENST00000458695 AEBP2Q6ZN18 517 aaPredicted RBP19.78■□□□□ 0.76
RBBP4-206ENST00000458695 CHIC1Q5VXU3 224 aa19.11■□□□□ 0.65
RBBP4-206ENST00000458695 NISCHQ9Y2I1 1504 aa19.08■□□□□ 0.64
RBBP4-206ENST00000458695 CCDC180Q9P1Z9 1646 aa16.97■□□□□ 0.31
RBBP4-206ENST00000458695 SENP3Q9H4L4 574 aaPredicted RBP16.82■□□□□ 0.28
RBBP4-206ENST00000458695 PHF23Q9BUL5 403 aaPredicted RBP16.78■□□□□ 0.28
RBBP4-206ENST00000458695 ABCC9O60706 1549 aa16.41■□□□□ 0.22
RBBP4-206ENST00000458695 ZCCHC6Q5VYS8 1495 aaKnown RBP15.93■□□□□ 0.14
RBBP4-206ENST00000458695 RB1CC1Q8TDY2 1594 aa15.88■□□□□ 0.13
RBBP4-206ENST00000458695 NACADO15069 1562 aa15.87■□□□□ 0.13
RBBP4-206ENST00000458695 DCAF8L2P0C7V8 631 aa15.86■□□□□ 0.13
RBBP4-206ENST00000458695 MYO15BQ96JP2 1530 aa15.8■□□□□ 0.12
RBBP4-206ENST00000458695 DCAF1Q9Y4B6 1507 aa15.8■□□□□ 0.12
RBBP4-206ENST00000458695 FOXD1Q16676 465 aa15.63■□□□□ 0.09
RBBP4-206ENST00000458695 UNC13AQ9UPW8 1703 aa15.58■□□□□ 0.08
RBBP4-206ENST00000458695 SCRIBQ14160 1630 aa15.47■□□□□ 0.07
RBBP4-206ENST00000458695 PLPPR3Q6T4P5 718 aa15.43■□□□□ 0.06
RBBP4-206ENST00000458695 BICRAQ9NZM4 1560 aa15.36■□□□□ 0.05
RBBP4-206ENST00000458695 PABPN1Q86U42 306 aaKnown RBP eCLIP15.32■□□□□ 0.04
RBBP4-206ENST00000458695 SHROOM4Q9ULL8 1493 aa15.23■□□□□ 0.03
RBBP4-206ENST00000458695 EIF4G1Q04637 1599 aaKnown RBP14.96□□□□□ -0.01
RBBP4-206ENST00000458695 PPP6R1Q9UPN7 881 aa14.88□□□□□ -0.03
RBBP4-206ENST00000458695 CC2D2AQ9P2K1 1620 aa14.87□□□□□ -0.03
RBBP4-206ENST00000458695 DNAJC5BQ9UF47 199 aa14.86□□□□□ -0.03
RBBP4-206ENST00000458695 ADRA2BP18089 450 aa14.85□□□□□ -0.03
RBBP4-206ENST00000458695 CECR2Q9BXF3 1484 aa14.82□□□□□ -0.04
RBBP4-206ENST00000458695 SMARCA4P51532 1647 aa14.81□□□□□ -0.04
RBBP4-206ENST00000458695 BAZ1AQ9NRL2 1556 aaPredicted RBP14.8□□□□□ -0.04
RBBP4-206ENST00000458695 PIAS4Q8N2W9 510 aaPredicted RBP14.71□□□□□ -0.06
RBBP4-206ENST00000458695 MROH2BQ7Z745 1585 aa14.7□□□□□ -0.06
RBBP4-206ENST00000458695 SMARCA2P51531 1590 aa14.67□□□□□ -0.06
RBBP4-206ENST00000458695 PEG3Q9GZU2 1588 aa14.65□□□□□ -0.06
RBBP4-206ENST00000458695 ATAD2BQ9ULI0 1458 aa14.65□□□□□ -0.06
RBBP4-206ENST00000458695 NCAPD3P42695 1498 aa14.61□□□□□ -0.07
RBBP4-206ENST00000458695 HMGXB3Q12766 1538 aa14.59□□□□□ -0.07
RBBP4-206ENST00000458695 WIZO95785 1651 aa14.59□□□□□ -0.07
RBBP4-206ENST00000458695 RSF1Q96T23 1441 aaPredicted RBP14.56□□□□□ -0.08
RBBP4-206ENST00000458695 BAZ1BQ9UIG0 1483 aaKnown RBP14.56□□□□□ -0.08
RBBP4-206ENST00000458695 MSH5O43196 834 aa14.51□□□□□ -0.09
RBBP4-206ENST00000458695 TOP2AP11388 1531 aaKnown RBP14.43□□□□□ -0.1
RBBP4-206ENST00000458695 SUPT5HO00267 1087 aaKnown RBP14.3□□□□□ -0.12
RBBP4-206ENST00000458695 LAMC3Q9Y6N6 1575 aa14.25□□□□□ -0.13
RBBP4-206ENST00000458695 CCDC88BA6NC98 1476 aa14.23□□□□□ -0.13
RBBP4-206ENST00000458695 NESP48681 1621 aa14.23□□□□□ -0.13
RBBP4-206ENST00000458695 CADPSQ9ULU8 1353 aa14.19□□□□□ -0.14
RBBP4-206ENST00000458695 PRDM2Q13029 1718 aa14.18□□□□□ -0.14
RBBP4-206ENST00000458695 CFTRP13569 1480 aa14.15□□□□□ -0.14
RBBP4-206ENST00000458695 ERCC6Q03468 1493 aa14.15□□□□□ -0.14
RBBP4-206ENST00000458695 KIF21AQ7Z4S6 1674 aa14.14□□□□□ -0.15
RBBP4-206ENST00000458695 PDS5BQ9NTI5 1447 aa14.12□□□□□ -0.15
RBBP4-206ENST00000458695 FANCD2Q9BXW9 1451 aa14.05□□□□□ -0.16
RBBP4-206ENST00000458695 CEP164Q9UPV0 1460 aa14.03□□□□□ -0.16
RBBP4-206ENST00000458695 THOC2Q8NI27 1593 aaKnown RBP14.02□□□□□ -0.16
RBBP4-206ENST00000458695 MRC2Q9UBG0 1479 aa13.98□□□□□ -0.17
RBBP4-206ENST00000458695 WDR62O43379 1518 aa13.94□□□□□ -0.18
RBBP4-206ENST00000458695 CUX2O14529 1486 aa13.94□□□□□ -0.18
RBBP4-206ENST00000458695 URB2Q14146 1524 aaKnown RBP13.9□□□□□ -0.18
RBBP4-206ENST00000458695 DNMBPQ6XZF7 1577 aa13.86□□□□□ -0.19
RBBP4-206ENST00000458695 ABCC8Q09428 1581 aa13.86□□□□□ -0.19
RBBP4-206ENST00000458695 TOPBP1Q92547 1522 aa13.85□□□□□ -0.19
RBBP4-206ENST00000458695 CUX1P39880 1505 aa13.79□□□□□ -0.2
RBBP4-206ENST00000458695 BIVM-ERCC5R4GMW8 1640 aa13.75□□□□□ -0.21
RBBP4-206ENST00000458695 WRNQ14191 1432 aaPredicted RBP eCLIP13.74□□□□□ -0.21
RBBP4-206ENST00000458695 TOP2BQ02880 1626 aa13.74□□□□□ -0.21
RBBP4-206ENST00000458695 SYNJ1O43426 1573 aa13.74□□□□□ -0.21
RBBP4-206ENST00000458695 POLA1P09884 1462 aaPredicted RBP13.73□□□□□ -0.21
RBBP4-206ENST00000458695 FGD5Q6ZNL6 1462 aa13.73□□□□□ -0.21
RBBP4-206ENST00000458695 IFT140Q96RY7 1462 aa13.72□□□□□ -0.21
RBBP4-206ENST00000458695 TARBP1Q13395 1621 aaKnown RBP13.71□□□□□ -0.22
RBBP4-206ENST00000458695 SOGA1O94964 1423 aa13.66□□□□□ -0.22
RBBP4-206ENST00000458695 RAD54L2Q9Y4B4 1467 aa13.66□□□□□ -0.22
RBBP4-206ENST00000458695 WDR97A6NE52 1622 aa13.66□□□□□ -0.22
RBBP4-206ENST00000458695 EIF4G3O43432 1585 aaKnown RBP13.64□□□□□ -0.23
RBBP4-206ENST00000458695 ZNF608Q9ULD9 1512 aaPredicted RBP13.64□□□□□ -0.23
RBBP4-206ENST00000458695 SCAF1Q9H7N4 1312 aaKnown RBP13.59□□□□□ -0.23
RBBP4-206ENST00000458695 ABCA10Q8WWZ4 1543 aa13.59□□□□□ -0.23
RBBP4-206ENST00000458695 POTEDQ86YR6 584 aa13.58□□□□□ -0.24
RBBP4-206ENST00000458695 AQRO60306 1485 aaKnown RBP eCLIP13.57□□□□□ -0.244e-7■■■■■ 43.1
RBBP4-206ENST00000458695 PPP4R3CPQ6ZMV5 832 aa13.56□□□□□ -0.24
RBBP4-206ENST00000458695 PBRM1Q86U86 1689 aa13.56□□□□□ -0.24
RBBP4-206ENST00000458695 ABCA5Q8WWZ7 1642 aa13.56□□□□□ -0.24
RBBP4-206ENST00000458695 TDRD9Q8NDG6 1382 aaKnown RBP13.56□□□□□ -0.24
RBBP4-206ENST00000458695 MAPK8IP2Q13387 824 aaPredicted RBP13.54□□□□□ -0.24
RBBP4-206ENST00000458695 GAPVD1Q14C86 1478 aa13.52□□□□□ -0.24
RBBP4-206ENST00000458695 TRIM41Q8WV44 630 aa13.5□□□□□ -0.25
RBBP4-206ENST00000458695 GRIN2BQ13224 1484 aa13.5□□□□□ -0.25
RBBP4-206ENST00000458695 SNAPC4Q5SXM2 1469 aa13.48□□□□□ -0.25
RBBP4-206ENST00000458695 CHD1O14646 1710 aa13.47□□□□□ -0.25
RBBP4-206ENST00000458695 MAGI1Q96QZ7 1491 aaPredicted RBP13.46□□□□□ -0.25
RBBP4-206ENST00000458695 ERICH3Q5RHP9 1530 aa13.45□□□□□ -0.26
RBBP4-206ENST00000458695 KIF27Q86VH2 1401 aa13.45□□□□□ -0.26
RBBP4-206ENST00000458695 ADAMTS12P58397 1594 aa13.42□□□□□ -0.26
RBBP4-206ENST00000458695 SYNJ2O15056 1496 aa13.4□□□□□ -0.26
RBBP4-206ENST00000458695 CUL7Q14999 1698 aa13.4□□□□□ -0.26
RBBP4-206ENST00000458695 FBLN2P98095 1184 aa13.39□□□□□ -0.27
RBBP4-206ENST00000458695 DMRT2Q9Y5R5 561 aa13.38□□□□□ -0.27
RBBP4-206ENST00000458695 CHMP7Q8WUX9 453 aaPredicted RBP13.37□□□□□ -0.27
RBBP4-206ENST00000458695 FHAD1B1AJZ9 1412 aa13.36□□□□□ -0.27
RBBP4-206ENST00000458695 RUSC2Q8N2Y8 1516 aa13.35□□□□□ -0.27
RBBP4-206ENST00000458695 OSCARQ8IYS5 282 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms