RNA–Protein interactions for RNA: ENST00000370399.6

TGFBR3-202, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TGFBR3, Length 4,550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-202ENST00000370399 NISCHQ9Y2I1 1504 aa13.85□□□□□ -0.19
TGFBR3-202ENST00000370399 DCAF8L2P0C7V8 631 aa13.06□□□□□ -0.32
TGFBR3-202ENST00000370399 SHROOM4Q9ULL8 1493 aa12.62□□□□□ -0.39
TGFBR3-202ENST00000370399 SUPT5HO00267 1087 aaKnown RBP12.5□□□□□ -0.41
TGFBR3-202ENST00000370399 EHMT2Q96KQ7 1210 aa11.87□□□□□ -0.51
TGFBR3-202ENST00000370399 ABCC9O60706 1549 aa11.72□□□□□ -0.53
TGFBR3-202ENST00000370399 FAM9AQ8IZU1 332 aaPredicted RBP11.7□□□□□ -0.54
TGFBR3-202ENST00000370399 ZCCHC6Q5VYS8 1495 aaKnown RBP11.54□□□□□ -0.56
TGFBR3-202ENST00000370399 TRIM41Q8WV44 630 aa11.54□□□□□ -0.56
TGFBR3-202ENST00000370399 CHIC1Q5VXU3 224 aa11.51□□□□□ -0.57
TGFBR3-202ENST00000370399 PABPN1Q86U42 306 aaKnown RBP eCLIP11.48□□□□□ -0.57
TGFBR3-202ENST00000370399 CCDC180Q9P1Z9 1646 aa11.46□□□□□ -0.58
TGFBR3-202ENST00000370399 PCGF6Q9BYE7 350 aa11.42□□□□□ -0.58
TGFBR3-202ENST00000370399 LOC105371045A0A1W2PR82 267 aa11.42□□□□□ -0.58
TGFBR3-202ENST00000370399 TTBK1Q5TCY1 1321 aaPredicted RBP11.39□□□□□ -0.59
TGFBR3-202ENST00000370399 RANGAP1P46060 587 aaPredicted RBP11.34□□□□□ -0.59
TGFBR3-202ENST00000370399 SCRIBQ14160 1630 aa11.29□□□□□ -0.6
TGFBR3-202ENST00000370399 PPARGC1BQ86YN6 1023 aaKnown RBP11.27□□□□□ -0.61
TGFBR3-202ENST00000370399 UBTFP17480 764 aaKnown RBP11.23□□□□□ -0.61
TGFBR3-202ENST00000370399 APLP2Q06481 763 aa11.14□□□□□ -0.63
TGFBR3-202ENST00000370399 RSF1Q96T23 1441 aaPredicted RBP11.04□□□□□ -0.64
TGFBR3-202ENST00000370399 DCAF1Q9Y4B6 1507 aa11.03□□□□□ -0.64
TGFBR3-202ENST00000370399 ATP1B4Q9UN42 357 aaPredicted RBP11.02□□□□□ -0.64
TGFBR3-202ENST00000370399 TRIM26Q12899 539 aaPredicted RBP11□□□□□ -0.65
TGFBR3-202ENST00000370399 CECR2Q9BXF3 1484 aa10.99□□□□□ -0.65
TGFBR3-202ENST00000370399 NACADO15069 1562 aa10.98□□□□□ -0.65
TGFBR3-202ENST00000370399 RB1CC1Q8TDY2 1594 aa10.97□□□□□ -0.65
TGFBR3-202ENST00000370399 CCER1Q8TC90 406 aaPredicted RBP10.96□□□□□ -0.66
TGFBR3-202ENST00000370399 MYO15BQ96JP2 1530 aa10.95□□□□□ -0.66
TGFBR3-202ENST00000370399 HRCP23327 699 aa10.89□□□□□ -0.67
TGFBR3-202ENST00000370399 CSRNP3Q8WYN3 585 aa10.84□□□□□ -0.67
TGFBR3-202ENST00000370399 HNRNPUL2Q1KMD3 747 aaKnown RBP10.82□□□□□ -0.68
TGFBR3-202ENST00000370399 MROH2BQ7Z745 1585 aa10.82□□□□□ -0.68
TGFBR3-202ENST00000370399 ITGAEP38570 1179 aa10.82□□□□□ -0.68
TGFBR3-202ENST00000370399 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.8□□□□□ -0.68
TGFBR3-202ENST00000370399 ZEB1P37275 1124 aaPredicted RBP10.79□□□□□ -0.68
TGFBR3-202ENST00000370399 BAZ1AQ9NRL2 1556 aaPredicted RBP10.73□□□□□ -0.69
TGFBR3-202ENST00000370399 P3H3Q8IVL6 736 aa10.69□□□□□ -0.7
TGFBR3-202ENST00000370399 WIZO95785 1651 aa10.66□□□□□ -0.7
TGFBR3-202ENST00000370399 BAZ1BQ9UIG0 1483 aaKnown RBP10.66□□□□□ -0.7
TGFBR3-202ENST00000370399 CCDC88BA6NC98 1476 aa10.63□□□□□ -0.71
TGFBR3-202ENST00000370399 WRNQ14191 1432 aaPredicted RBP eCLIP10.61□□□□□ -0.71
TGFBR3-202ENST00000370399 FBLN2P98095 1184 aa10.59□□□□□ -0.71
TGFBR3-202ENST00000370399 SOGA1O94964 1423 aa10.58□□□□□ -0.72
TGFBR3-202ENST00000370399 ARID3CA6NKF2 412 aa10.58□□□□□ -0.72
TGFBR3-202ENST00000370399 ABCC8Q09428 1581 aa10.58□□□□□ -0.72
TGFBR3-202ENST00000370399 FAM50AQ14320 339 aaKnown RBP10.57□□□□□ -0.72
TGFBR3-202ENST00000370399 YTHDC1Q96MU7 727 aaKnown RBP10.53□□□□□ -0.72
TGFBR3-202ENST00000370399 CEP162Q5TB80 1403 aa10.5□□□□□ -0.73
TGFBR3-202ENST00000370399 SMARCA4P51532 1647 aa10.49□□□□□ -0.73
TGFBR3-202ENST00000370399 ATAD2BQ9ULI0 1458 aa10.48□□□□□ -0.73
TGFBR3-202ENST00000370399 TOP2AP11388 1531 aaKnown RBP10.48□□□□□ -0.73
TGFBR3-202ENST00000370399 CLIP1P30622 1438 aa10.47□□□□□ -0.73
TGFBR3-202ENST00000370399 EEA1Q15075 1411 aa10.43□□□□□ -0.74
TGFBR3-202ENST00000370399 GOLGA3Q08378 1498 aa10.43□□□□□ -0.74
TGFBR3-202ENST00000370399 NEUROD1Q13562 356 aa10.43□□□□□ -0.74
TGFBR3-202ENST00000370399 TNIKQ9UKE5 1360 aa10.42□□□□□ -0.74
TGFBR3-202ENST00000370399 SMARCA2P51531 1590 aa10.42□□□□□ -0.74
TGFBR3-202ENST00000370399 RUSC2Q8N2Y8 1516 aa10.42□□□□□ -0.74
TGFBR3-202ENST00000370399 DIEXFQ68CQ4 756 aaKnown RBP10.41□□□□□ -0.74
TGFBR3-202ENST00000370399 CENPBP07199 599 aaPredicted RBP10.4□□□□□ -0.74
TGFBR3-202ENST00000370399 KIF27Q86VH2 1401 aa10.39□□□□□ -0.75
TGFBR3-202ENST00000370399 CEP164Q9UPV0 1460 aa10.37□□□□□ -0.75
TGFBR3-202ENST00000370399 TRIM52Q96A61 297 aa10.37□□□□□ -0.75
TGFBR3-202ENST00000370399 MYT1LQ9UL68 1186 aa10.36□□□□□ -0.75
TGFBR3-202ENST00000370399 CNGB1Q14028 1251 aaPredicted RBP10.34□□□□□ -0.75
TGFBR3-202ENST00000370399 CUX2O14529 1486 aa10.34□□□□□ -0.75
TGFBR3-202ENST00000370399 POLR3GLQ9BT43 218 aa10.32□□□□□ -0.76
TGFBR3-202ENST00000370399 CADPSQ9ULU8 1353 aa10.32□□□□□ -0.76
TGFBR3-202ENST00000370399 ZNF777Q9ULD5 760 aaPredicted RBP10.31□□□□□ -0.76
TGFBR3-202ENST00000370399 CARMIL1Q5VZK9 1371 aa10.3□□□□□ -0.76
TGFBR3-202ENST00000370399 CHMP7Q8WUX9 453 aaPredicted RBP10.3□□□□□ -0.76
TGFBR3-202ENST00000370399 BICRAQ9NZM4 1560 aa10.29□□□□□ -0.76
TGFBR3-202ENST00000370399 CHIC2Q9UKJ5 165 aa10.29□□□□□ -0.76
TGFBR3-202ENST00000370399 TDRD9Q8NDG6 1382 aaKnown RBP10.29□□□□□ -0.76
TGFBR3-202ENST00000370399 ZNF316A6NFI3 1004 aaPredicted RBP10.28□□□□□ -0.76
TGFBR3-202ENST00000370399 KANK4Q5T7N3 995 aaPredicted RBP10.28□□□□□ -0.76
TGFBR3-202ENST00000370399 RAPGEF2Q9Y4G8 1499 aa10.27□□□□□ -0.77
TGFBR3-202ENST00000370399 EIF4G1Q04637 1599 aaKnown RBP10.27□□□□□ -0.77
TGFBR3-202ENST00000370399 DNAJC5BQ9UF47 199 aa10.25□□□□□ -0.77
TGFBR3-202ENST00000370399 MTUS2Q5JR59 1369 aa10.24□□□□□ -0.77
TGFBR3-202ENST00000370399 NCAPD3P42695 1498 aa10.24□□□□□ -0.77
TGFBR3-202ENST00000370399 ZNF326Q5BKZ1 582 aaKnown RBP10.22□□□□□ -0.77
TGFBR3-202ENST00000370399 CDK11AQ9UQ88 783 aaPredicted RBP10.21□□□□□ -0.78
TGFBR3-202ENST00000370399 VPS8Q8N3P4 1428 aa10.2□□□□□ -0.78
TGFBR3-202ENST00000370399 ERCC6Q03468 1493 aa10.19□□□□□ -0.78
TGFBR3-202ENST00000370399 RRP7BPQ9NSQ0 103 aa10.18□□□□□ -0.78
TGFBR3-202ENST00000370399 FANCD2Q9BXW9 1451 aa10.18□□□□□ -0.78
TGFBR3-202ENST00000370399 PDS5BQ9NTI5 1447 aa10.18□□□□□ -0.78
TGFBR3-202ENST00000370399 HIRIP3Q9BW71 556 aaPredicted RBP10.17□□□□□ -0.78
TGFBR3-202ENST00000370399 UNC13AQ9UPW8 1703 aa10.16□□□□□ -0.78
TGFBR3-202ENST00000370399 SYNJ1O43426 1573 aa10.15□□□□□ -0.78
TGFBR3-202ENST00000370399 NESP48681 1621 aa10.14□□□□□ -0.79
TGFBR3-202ENST00000370399 IGF1RP08069 1367 aa10.14□□□□□ -0.79
TGFBR3-202ENST00000370399 RAD54L2Q9Y4B4 1467 aa10.13□□□□□ -0.79
TGFBR3-202ENST00000370399 PELP1Q8IZL8 1130 aaKnown RBP10.13□□□□□ -0.79
TGFBR3-202ENST00000370399 FGD5Q6ZNL6 1462 aa10.11□□□□□ -0.79
TGFBR3-202ENST00000370399 CFTRP13569 1480 aa10.11□□□□□ -0.79
TGFBR3-202ENST00000370399 SIN3AQ96ST3 1273 aa10.11□□□□□ -0.79
TGFBR3-202ENST00000370399 KCNH8Q96L42 1107 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 749.3 ms