Protein–RNA interactions for Protein: P43243

MATR3, Matrin-3, humanhuman

Known RBP eCLIP

Length 847 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3P43243 CASC19-235ENST00000641496 1154 nt10.52□□□□□ -0.736e-7■■■□□ 16
MATR3P43243 CASC19-263ENST00000641880 1404 nt10.16□□□□□ -0.786e-7■■■□□ 16
MATR3P43243 CASC19-254ENST00000641719 1443 nt9.73□□□□□ -0.856e-7■■■□□ 16
MATR3P43243 CASC19-273ENST00000642010 925 nt9.47□□□□□ -0.896e-7■■■□□ 16
MATR3P43243 CASC19-214ENST00000641171 1493 nt9.07□□□□□ -0.966e-7■■■□□ 16
MATR3P43243 CASC19-252ENST00000641704 1313 nt8.9□□□□□ -0.986e-7■■■□□ 16
MATR3P43243 CASC19-216ENST00000641179 1140 nt8.65□□□□□ -1.026e-7■■■□□ 16
MATR3P43243 CASC19-205ENST00000641013 1411 ntBASIC8.51□□□□□ -1.056e-7■■■□□ 16
MATR3P43243 CASC19-283ENST00000642134 870 nt8.31□□□□□ -1.086e-7■■■□□ 16
MATR3P43243 CASC19-257ENST00000641786 816 nt8.26□□□□□ -1.096e-7■■■□□ 16
MATR3P43243 CASC19-266ENST00000641934 1050 nt8.21□□□□□ -1.16e-7■■■□□ 16
MATR3P43243 CASC19-207ENST00000641029 1047 nt8.11□□□□□ -1.116e-7■■■□□ 16
MATR3P43243 CASC19-250ENST00000641696 886 nt8.1□□□□□ -1.116e-7■■■□□ 16
MATR3P43243 CASC19-208ENST00000641056 1292 ntBASIC8.09□□□□□ -1.116e-7■■■□□ 16
MATR3P43243 CASC19-239ENST00000641547 915 nt8.09□□□□□ -1.116e-7■■■□□ 16
MATR3P43243 CASC19-224ENST00000641362 1146 nt8.09□□□□□ -1.116e-7■■■□□ 16
MATR3P43243 CASC19-276ENST00000642077 993 nt8.09□□□□□ -1.116e-7■■■□□ 16
MATR3P43243 CASC19-220ENST00000641298 974 nt8.09□□□□□ -1.116e-7■■■□□ 16
MATR3P43243 CASC19-227ENST00000641411 1285 ntBASIC8.09□□□□□ -1.116e-7■■■□□ 16
MATR3P43243 CASC19-212ENST00000641153 1287 ntBASIC7.94□□□□□ -1.146e-7■■■□□ 16
MATR3P43243 CASC19-211ENST00000641106 1184 nt7.73□□□□□ -1.176e-7■■■□□ 16
MATR3P43243 CASC19-232ENST00000641480 1244 ntBASIC7.68□□□□□ -1.186e-7■■■□□ 16
MATR3P43243 CASC19-282ENST00000642126 1206 nt7.52□□□□□ -1.216e-7■■■□□ 16
MATR3P43243 CASC19-243ENST00000641588 1546 ntBASIC7.48□□□□□ -1.216e-7■■■□□ 16
MATR3P43243 CASC19-218ENST00000641218 1522 nt7.41□□□□□ -1.226e-7■■■□□ 16
MATR3P43243 CASC19-249ENST00000641681 871 nt7.37□□□□□ -1.236e-7■■■□□ 16
MATR3P43243 CASC19-253ENST00000641706 818 nt7.34□□□□□ -1.236e-7■■■□□ 16
MATR3P43243 CASC19-244ENST00000641604 1251 nt7.27□□□□□ -1.256e-7■■■□□ 16
MATR3P43243 CASC19-228ENST00000641414 1684 ntBASIC7.21□□□□□ -1.266e-7■■■□□ 16
MATR3P43243 CASC19-246ENST00000641625 1606 ntBASIC6.98□□□□□ -1.296e-7■■■□□ 16
MATR3P43243 CASC19-251ENST00000641701 2204 nt6.95□□□□□ -1.36e-7■■■□□ 16
MATR3P43243 CASC19-274ENST00000642018 970 ntBASIC6.88□□□□□ -1.316e-7■■■□□ 16
MATR3P43243 CASC19-245ENST00000641615 770 nt6.66□□□□□ -1.346e-7■■■□□ 16
MATR3P43243 CASC19-238ENST00000641523 1558 ntBASIC6.62□□□□□ -1.356e-7■■■□□ 16
MATR3P43243 CASC19-234ENST00000641488 1157 nt6.61□□□□□ -1.356e-7■■■□□ 16
MATR3P43243 CASC19-260ENST00000641828 2001 ntBASIC6.39□□□□□ -1.396e-7■■■□□ 16
MATR3P43243 CASC19-255ENST00000641733 1385 ntBASIC6.39□□□□□ -1.396e-7■■■□□ 16
MATR3P43243 CASC19-225ENST00000641365 2219 nt6.28□□□□□ -1.46e-7■■■□□ 16
MATR3P43243 CASC19-213ENST00000641162 1091 nt6.16□□□□□ -1.426e-7■■■□□ 16
MATR3P43243 CASC19-248ENST00000641674 1356 ntBASIC6.08□□□□□ -1.446e-7■■■□□ 16
MATR3P43243 CASC19-264ENST00000641912 1184 ntBASIC5.92□□□□□ -1.466e-7■■■□□ 16
MATR3P43243 CASC19-233ENST00000641487 966 nt5.92□□□□□ -1.466e-7■■■□□ 16
MATR3P43243 CASC19-281ENST00000642118 1554 ntBASIC5.6□□□□□ -1.516e-7■■■□□ 16
MATR3P43243 CASC19-269ENST00000641964 1415 nt5.6□□□□□ -1.516e-7■■■□□ 16
MATR3P43243 CASC19-221ENST00000641309 1382 ntBASIC5.56□□□□□ -1.526e-7■■■□□ 16
MATR3P43243 CASC19-222ENST00000641321 1173 ntBASIC5.56□□□□□ -1.526e-7■■■□□ 16
MATR3P43243 CASC19-204ENST00000641001 2055 ntBASIC5.27□□□□□ -1.576e-7■■■□□ 16
MATR3P43243 CASC19-256ENST00000641746 958 nt5.1□□□□□ -1.596e-7■■■□□ 16
MATR3P43243 CASC19-284ENST00000642142 1868 ntBASIC5.07□□□□□ -1.66e-7■■■□□ 16
MATR3P43243 CASC19-267ENST00000641944 1117 nt5.04□□□□□ -1.66e-7■■■□□ 16
MATR3P43243 CASC19-215ENST00000641174 959 nt5.01□□□□□ -1.616e-7■■■□□ 16
MATR3P43243 CASC19-231ENST00000641425 1156 nt5.01□□□□□ -1.616e-7■■■□□ 16
MATR3P43243 CASC19-262ENST00000641867 866 nt3.97□□□□□ -1.776e-7■■■□□ 16
MATR3P43243 CASC19-209ENST00000641060 679 nt3.5□□□□□ -1.856e-7■■■□□ 16
MATR3P43243 CASC19-217ENST00000641187 875 nt3.01□□□□□ -1.936e-7■■■□□ 16
MATR3P43243 CASC19-280ENST00000642102 1351 ntBASIC2.19□□□□□ -2.066e-7■■■□□ 16
MATR3P43243 HGD-207ENST00000485313 528 ntTSL 56.56□□□□□ -1.368e-8■■■□□ 16
MATR3P43243 HGD-205ENST00000476082 462 ntTSL 55.63□□□□□ -1.518e-8■■■□□ 16
MATR3P43243 HGD-208ENST00000488183 572 ntTSL 44.24□□□□□ -1.738e-8■■■□□ 16
MATR3P43243 DLEU1-235ENST00000498557 639 ntTSL 1 (best)8.18□□□□□ -1.11e-6■■■□□ 16
MATR3P43243 DLEU1-216ENST00000473075 348 ntTSL 54.32□□□□□ -1.725e-7■■■□□ 16
MATR3P43243 SEPT10-213ENST00000486678 980 ntTSL 520.14■□□□□ 0.812e-6■■■□□ 16
MATR3P43243 SEPT10-206ENST00000423520 557 ntTSL 420.02■□□□□ 0.82e-6■■■□□ 16
MATR3P43243 SEPT10-210ENST00000461295 581 ntTSL 320.02■□□□□ 0.82e-6■■■□□ 16
MATR3P43243 SEPT10-214ENST00000493445 583 ntTSL 519.93■□□□□ 0.782e-6■■■□□ 16
MATR3P43243 SEPT10-207ENST00000425498 566 ntTSL 416.6■□□□□ 0.252e-6■■■□□ 16
MATR3P43243 SEPT10-202ENST00000397712 3071 ntTSL 1 (best) BASIC14.3□□□□□ -0.122e-6■■■□□ 16
MATR3P43243 SEPT10-208ENST00000437928 1782 ntTSL 5 BASIC14.22□□□□□ -0.132e-6■■■□□ 16
MATR3P43243 SEPT10-201ENST00000356688 3091 ntTSL 2 BASIC13.38□□□□□ -0.272e-6■■■□□ 16
MATR3P43243 SEPT10-203ENST00000397714 2719 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.292e-6■■■□□ 16
MATR3P43243 SEPT10-209ENST00000442746 581 ntTSL 312.17□□□□□ -0.462e-6■■■□□ 16
MATR3P43243 SEPT10-205ENST00000415095 1605 ntTSL 5 BASIC10.19□□□□□ -0.782e-6■■■□□ 16
MATR3P43243 SEPT10-204ENST00000411469 272 ntTSL 58.49□□□□□ -1.052e-6■■■□□ 16
MATR3P43243 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC17.02■□□□□ 0.324e-8■■■□□ 16
MATR3P43243 PCNX1-201ENST00000304743 12919 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.844e-8■■■□□ 16
MATR3P43243 RNF166-209ENST00000567844 633 ntTSL 5 BASIC28.18■■■□□ 2.18e-8■■■□□ 16
MATR3P43243 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.748e-8■■■□□ 16
MATR3P43243 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.788e-8■■■□□ 16
MATR3P43243 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC19.57■□□□□ 0.728e-8■■■□□ 16
MATR3P43243 RNF166-205ENST00000562544 502 ntTSL 518.64■□□□□ 0.578e-8■■■□□ 16
MATR3P43243 RNF166-204ENST00000562499 590 ntTSL 410.18□□□□□ -0.788e-8■■■□□ 16
MATR3P43243 STX2-203ENST00000392373 2151 ntAPPRIS P4 TSL 5 BASIC9□□□□□ -0.978e-8■■■□□ 16
MATR3P43243 ECT2-206ENST00000417960 4363 ntAPPRIS ALT1 TSL 1 (best) BASIC8.92□□□□□ -0.981e-6■■■□□ 16
MATR3P43243 RSRC1-213ENST00000494002 679 ntTSL 27.86□□□□□ -1.158e-8■■■□□ 16
MATR3P43243 ECT2-201ENST00000232458 4087 ntAPPRIS P2 TSL 1 (best) BASIC7.55□□□□□ -1.21e-6■■■□□ 16
MATR3P43243 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC7.15□□□□□ -1.271e-6■■■□□ 16
MATR3P43243 RSRC1-204ENST00000468344 551 ntTSL 36.05□□□□□ -1.448e-8■■■□□ 16
MATR3P43243 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.72□□□□□ -1.651e-6■■■□□ 16
MATR3P43243 STX2-202ENST00000344271 661 ntTSL 33.66□□□□□ -1.828e-8■■■□□ 16
MATR3P43243 LEMD3-204ENST00000542032 645 ntTSL 33.35□□□□□ -1.878e-8■■■□□ 16
MATR3P43243 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.95□□□□□ -1.941e-6■■■□□ 16
MATR3P43243 AC073335.2-201ENST00000610177 3441 ntBASIC14.54□□□□□ -0.083e-6■■■□□ 16
MATR3P43243 TAF4-207ENST00000608887 284 ntTSL 49.78□□□□□ -0.842e-6■■■□□ 16
MATR3P43243 SOX5-204ENST00000441133 638 ntTSL 2 BASIC12.36□□□□□ -0.439e-7■■■□□ 16
MATR3P43243 SOX5-213ENST00000541847 758 ntTSL 3 BASIC9.36□□□□□ -0.919e-7■■■□□ 16
MATR3P43243 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.69□□□□□ -1.664e-8■■■□□ 15.9
MATR3P43243 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC21.22■□□□□ 0.996e-6■■■□□ 15.9
MATR3P43243 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.866e-6■■■□□ 15.9
MATR3P43243 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.616e-6■■■□□ 15.9
MATR3P43243 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC3.88□□□□□ -1.796e-6■■■□□ 15.9
Retrieved 100 of 16,209 protein–RNA pairs in 84.6 ms