RNA–Protein interactions for RNA: ENST00000541847.5

SOX5-213, Transcript of SRY-box 5, humanhuman

TSL 3 BASIC

Gene SOX5, Length 758 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX5-213ENST00000541847 NISCHQ9Y2I1 1504 aa22.75■■□□□ 1.23
SOX5-213ENST00000541847 ABCC9O60706 1549 aa21.1■□□□□ 0.97
SOX5-213ENST00000541847 CCDC180Q9P1Z9 1646 aa20.81■□□□□ 0.92
SOX5-213ENST00000541847 DNAJC5BQ9UF47 199 aa20.2■□□□□ 0.82
SOX5-213ENST00000541847 RB1CC1Q8TDY2 1594 aa19.96■□□□□ 0.79
SOX5-213ENST00000541847 UNC13AQ9UPW8 1703 aa19.73■□□□□ 0.75
SOX5-213ENST00000541847 NACADO15069 1562 aa19.69■□□□□ 0.74
SOX5-213ENST00000541847 PABPN1Q86U42 306 aaKnown RBP eCLIP19.47■□□□□ 0.71
SOX5-213ENST00000541847 BICRAQ9NZM4 1560 aa19.41■□□□□ 0.7
SOX5-213ENST00000541847 DCAF8L2P0C7V8 631 aa19.24■□□□□ 0.67
SOX5-213ENST00000541847 MYO15BQ96JP2 1530 aa19.23■□□□□ 0.67
SOX5-213ENST00000541847 CC2D2AQ9P2K1 1620 aa19.14■□□□□ 0.66
SOX5-213ENST00000541847 SHROOM4Q9ULL8 1493 aa19.08■□□□□ 0.64
SOX5-213ENST00000541847 CECR2Q9BXF3 1484 aa19.07■□□□□ 0.64
SOX5-213ENST00000541847 EIF4G1Q04637 1599 aaKnown RBP18.95■□□□□ 0.62
SOX5-213ENST00000541847 DNAJC5Q9H3Z4 198 aa18.95■□□□□ 0.62
SOX5-213ENST00000541847 SCRIBQ14160 1630 aa18.81■□□□□ 0.6
SOX5-213ENST00000541847 DCAF1Q9Y4B6 1507 aa18.8■□□□□ 0.6
SOX5-213ENST00000541847 ZCCHC6Q5VYS8 1495 aaKnown RBP18.74■□□□□ 0.59
SOX5-213ENST00000541847 CUX2O14529 1486 aa18.46■□□□□ 0.54
SOX5-213ENST00000541847 ERCC6Q03468 1493 aa18.26■□□□□ 0.51
SOX5-213ENST00000541847 NCAPD3P42695 1498 aa18.11■□□□□ 0.49
SOX5-213ENST00000541847 THOC2Q8NI27 1593 aaKnown RBP18.04■□□□□ 0.48
SOX5-213ENST00000541847 HMGXB3Q12766 1538 aa18■□□□□ 0.47
SOX5-213ENST00000541847 NESP48681 1621 aa18■□□□□ 0.47
SOX5-213ENST00000541847 ATAD2BQ9ULI0 1458 aa17.98■□□□□ 0.47
SOX5-213ENST00000541847 SMARCA2P51531 1590 aa17.96■□□□□ 0.46
SOX5-213ENST00000541847 SMARCA4P51532 1647 aa17.93■□□□□ 0.46
SOX5-213ENST00000541847 KIF21AQ7Z4S6 1674 aa17.93■□□□□ 0.46
SOX5-213ENST00000541847 LAMC3Q9Y6N6 1575 aa17.87■□□□□ 0.45
SOX5-213ENST00000541847 TRIM41Q8WV44 630 aa17.86■□□□□ 0.45
SOX5-213ENST00000541847 BAZ1BQ9UIG0 1483 aaKnown RBP17.78■□□□□ 0.44
SOX5-213ENST00000541847 PEG3Q9GZU2 1588 aa17.76■□□□□ 0.43
SOX5-213ENST00000541847 BAZ1AQ9NRL2 1556 aaPredicted RBP17.72■□□□□ 0.43
SOX5-213ENST00000541847 PDS5BQ9NTI5 1447 aa17.68■□□□□ 0.42
SOX5-213ENST00000541847 WDR62O43379 1518 aa17.62■□□□□ 0.41
SOX5-213ENST00000541847 MRC2Q9UBG0 1479 aa17.59■□□□□ 0.41
SOX5-213ENST00000541847 MROH2BQ7Z745 1585 aa17.51■□□□□ 0.39
SOX5-213ENST00000541847 CADPSQ9ULU8 1353 aa17.49■□□□□ 0.39
SOX5-213ENST00000541847 RIMBP3CA6NJZ7 1639 aa17.43■□□□□ 0.38
SOX5-213ENST00000541847 RIMBP3BA6NNM3 1639 aa17.43■□□□□ 0.38
SOX5-213ENST00000541847 RIMBP3Q9UFD9 1639 aa17.43■□□□□ 0.38
SOX5-213ENST00000541847 CEP164Q9UPV0 1460 aa17.42■□□□□ 0.38
SOX5-213ENST00000541847 OSCARQ8IYS5 282 aa17.41■□□□□ 0.38
SOX5-213ENST00000541847 WIZO95785 1651 aa17.36■□□□□ 0.37
SOX5-213ENST00000541847 FANCD2Q9BXW9 1451 aa17.33■□□□□ 0.37
SOX5-213ENST00000541847 PRDM2Q13029 1718 aa17.32■□□□□ 0.36
SOX5-213ENST00000541847 URB2Q14146 1524 aaKnown RBP17.25■□□□□ 0.35
SOX5-213ENST00000541847 ARHGEF11O15085 1522 aa17.24■□□□□ 0.35
SOX5-213ENST00000541847 CFTRP13569 1480 aa17.23■□□□□ 0.35
SOX5-213ENST00000541847 CHD1O14646 1710 aa17.15■□□□□ 0.34
SOX5-213ENST00000541847 ZNF608Q9ULD9 1512 aaPredicted RBP17.09■□□□□ 0.33
SOX5-213ENST00000541847 EIF4G3O43432 1585 aaKnown RBP17.08■□□□□ 0.32
SOX5-213ENST00000541847 IFT140Q96RY7 1462 aa17.07■□□□□ 0.32
SOX5-213ENST00000541847 TOP2AP11388 1531 aaKnown RBP17.06■□□□□ 0.32
SOX5-213ENST00000541847 CYB5RLQ6IPT4 315 aa17.03■□□□□ 0.32
SOX5-213ENST00000541847 ARAP1Q96P48 1450 aa17.02■□□□□ 0.32
SOX5-213ENST00000541847 TRHP20396 242 aaPredicted RBP17.01■□□□□ 0.31
SOX5-213ENST00000541847 TOPBP1Q92547 1522 aa16.97■□□□□ 0.31
SOX5-213ENST00000541847 TARBP1Q13395 1621 aaKnown RBP16.94■□□□□ 0.3
SOX5-213ENST00000541847 RSF1Q96T23 1441 aaPredicted RBP16.94■□□□□ 0.3
SOX5-213ENST00000541847 ABCC8Q09428 1581 aa16.91■□□□□ 0.3
SOX5-213ENST00000541847 DNMBPQ6XZF7 1577 aa16.91■□□□□ 0.3
SOX5-213ENST00000541847 AEBP2Q6ZN18 517 aaPredicted RBP16.9■□□□□ 0.3
SOX5-213ENST00000541847 AQRO60306 1485 aaKnown RBP eCLIP16.84■□□□□ 0.29
SOX5-213ENST00000541847 CLASP1Q7Z460 1538 aa16.82■□□□□ 0.28
SOX5-213ENST00000541847 CCDC88BA6NC98 1476 aa16.81■□□□□ 0.28
SOX5-213ENST00000541847 FBLN2P98095 1184 aa16.76■□□□□ 0.27
SOX5-213ENST00000541847 WDR97A6NE52 1622 aa16.76■□□□□ 0.27
SOX5-213ENST00000541847 SYNJ1O43426 1573 aa16.76■□□□□ 0.27
SOX5-213ENST00000541847 POLA1P09884 1462 aaPredicted RBP16.75■□□□□ 0.27
SOX5-213ENST00000541847 SNAPC4Q5SXM2 1469 aa16.69■□□□□ 0.26
SOX5-213ENST00000541847 PBRM1Q86U86 1689 aa16.67■□□□□ 0.26
SOX5-213ENST00000541847 RAD54L2Q9Y4B4 1467 aa16.67■□□□□ 0.26
SOX5-213ENST00000541847 MAGI1Q96QZ7 1491 aaPredicted RBP16.65■□□□□ 0.26
SOX5-213ENST00000541847 TDRD9Q8NDG6 1382 aaKnown RBP16.63■□□□□ 0.25
SOX5-213ENST00000541847 SOGA1O94964 1423 aa16.62■□□□□ 0.25
SOX5-213ENST00000541847 KIF13AQ9H1H9 1805 aa16.61■□□□□ 0.25
SOX5-213ENST00000541847 GAPVD1Q14C86 1478 aa16.61■□□□□ 0.25
SOX5-213ENST00000541847 SYNJ2O15056 1496 aa16.59■□□□□ 0.25
SOX5-213ENST00000541847 CHMP7Q8WUX9 453 aaPredicted RBP16.58■□□□□ 0.24
SOX5-213ENST00000541847 GRIN2BQ13224 1484 aa16.57■□□□□ 0.24
SOX5-213ENST00000541847 FGD5Q6ZNL6 1462 aa16.57■□□□□ 0.24
SOX5-213ENST00000541847 CUX1P39880 1505 aa16.5■□□□□ 0.23
SOX5-213ENST00000541847 ERCC6L2Q5T890 1561 aa16.49■□□□□ 0.23
SOX5-213ENST00000541847 ABCA5Q8WWZ7 1642 aa16.48■□□□□ 0.23
SOX5-213ENST00000541847 SHROOM2Q13796 1616 aa16.44■□□□□ 0.22
SOX5-213ENST00000541847 CEP170Q5SW79 1584 aa16.43■□□□□ 0.22
SOX5-213ENST00000541847 GRIN2AQ12879 1464 aa16.37■□□□□ 0.21
SOX5-213ENST00000541847 ABCA10Q8WWZ4 1543 aa16.36■□□□□ 0.21
SOX5-213ENST00000541847 ADAMTS12P58397 1594 aa16.36■□□□□ 0.21
SOX5-213ENST00000541847 NUP160Q12769 1436 aa16.32■□□□□ 0.2
SOX5-213ENST00000541847 TSPOAP1O95153 1857 aa16.29■□□□□ 0.2
SOX5-213ENST00000541847 DIP2BQ9P265 1576 aa16.27■□□□□ 0.2
SOX5-213ENST00000541847 KDM6BO15054 1643 aa16.27■□□□□ 0.19
SOX5-213ENST00000541847 ABCC10Q5T3U5 1492 aa16.24■□□□□ 0.19
SOX5-213ENST00000541847 ILDR1Q86SU0 546 aaPredicted RBP16.24■□□□□ 0.19
SOX5-213ENST00000541847 MAPKBP1O60336 1514 aa16.24■□□□□ 0.19
SOX5-213ENST00000541847 BIVM-ERCC5R4GMW8 1640 aa16.2■□□□□ 0.18
SOX5-213ENST00000541847 KDM4FA0A1W2PPD8 638 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms