Protein–RNA interactions for Protein: P43243

MATR3, Matrin-3, humanhuman

Known RBP eCLIP

Length 847 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3P43243 GATAD2A-212ENST00000494516 640 ntTSL 222.16■■□□□ 1.143e-7■■■■■ 61.2
MATR3P43243 GATAD2A-204ENST00000417582 655 ntTSL 221.74■■□□□ 1.073e-7■■■■■ 61.2
MATR3P43243 GATAD2A-213ENST00000609040 1652 ntTSL 220.78■□□□□ 0.923e-7■■■■■ 61.2
MATR3P43243 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC19.77■□□□□ 0.763e-7■■■■■ 61.2
MATR3P43243 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC21.73■■□□□ 1.072e-14■■■■■ 59.1
MATR3P43243 RUFY3-204ENST00000502653 2342 ntTSL 2 BASIC10.32□□□□□ -0.762e-14■■■■■ 59.1
MATR3P43243 RUFY3-207ENST00000504805 562 ntTSL 57.93□□□□□ -1.142e-14■■■■■ 59.1
MATR3P43243 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.312e-14■■■■■ 59.1
MATR3P43243 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC6□□□□□ -1.452e-14■■■■■ 59.1
MATR3P43243 RUFY3-209ENST00000512103 582 ntTSL 32.01□□□□□ -2.092e-14■■■■■ 59.1
MATR3P43243 AFF4-206ENST00000465484 1729 ntTSL 1 (best)18.71■□□□□ 0.594e-12■■■■■ 58.1
MATR3P43243 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.473e-12■■■■■ 56.7
MATR3P43243 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC17.05■□□□□ 0.323e-12■■■■■ 56.7
MATR3P43243 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.253e-12■■■■■ 56.7
MATR3P43243 AARSD1-204ENST00000436545 680 ntTSL 316.51■□□□□ 0.233e-12■■■■■ 56.7
MATR3P43243 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC16.39■□□□□ 0.213e-12■■■■■ 56.7
MATR3P43243 PTGES3L-AARSD1-205ENST00000423601 584 ntTSL 316.08■□□□□ 0.163e-12■■■■■ 56.7
MATR3P43243 AARSD1-217ENST00000591910 726 ntTSL 314.19□□□□□ -0.143e-12■■■■■ 56.7
MATR3P43243 AARSD1-205ENST00000441280 983 ntTSL 213.28□□□□□ -0.283e-12■■■■■ 56.7
MATR3P43243 AARSD1-206ENST00000450475 783 ntTSL 512.98□□□□□ -0.333e-12■■■■■ 56.7
MATR3P43243 AARSD1-203ENST00000430739 752 ntTSL 312.98□□□□□ -0.333e-12■■■■■ 56.7
MATR3P43243 PTGES3L-AARSD1-203ENST00000409399 2042 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.423e-12■■■■■ 56.7
MATR3P43243 AARSD1-201ENST00000416949 478 ntTSL 411.22□□□□□ -0.613e-12■■■■■ 56.7
MATR3P43243 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.82e-13■■■■■ 56
MATR3P43243 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.32e-13■■■■■ 56
MATR3P43243 LAMA5-202ENST00000370677 1674 ntTSL 221.68■■□□□ 1.062e-15■■■■■ 54.7
MATR3P43243 LAMA5-213ENST00000497053 723 ntTSL 316.27■□□□□ 0.22e-15■■■■■ 54.7
MATR3P43243 LAMA5-201ENST00000252999 11426 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.262e-15■■■■■ 54.7
MATR3P43243 AL669831.3-208ENST00000634337 891 ntTSL 5 BASIC12.55□□□□□ -0.42e-23■■■■■ 54.3
MATR3P43243 AL669831.3-207ENST00000635509 941 ntTSL 59.76□□□□□ -0.852e-23■■■■■ 54.3
MATR3P43243 AL669831.3-209ENST00000440200 413 ntTSL 55.64□□□□□ -1.512e-23■■■■■ 54.3
MATR3P43243 AL669831.3-203ENST00000419394 491 ntTSL 53.89□□□□□ -1.792e-23■■■■■ 54.3
MATR3P43243 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC6.73□□□□□ -1.336e-18■■■■■ 54
MATR3P43243 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.796e-18■■■■■ 54
MATR3P43243 SELENOI-202ENST00000442141 504 ntTSL 54.16□□□□□ -1.746e-15■■■■■ 52.7
MATR3P43243 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.241e-14■■■■■ 51.7
MATR3P43243 NXF1-210ENST00000531579 590 ntTSL 416.33■□□□□ 0.21e-14■■■■■ 51.7
MATR3P43243 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.031e-14■■■■■ 51.7
MATR3P43243 NXF1-207ENST00000530875 1922 ntTSL 1 (best)15.23■□□□□ 0.031e-14■■■■■ 51.7
MATR3P43243 NXF1-211ENST00000531709 4128 ntTSL 1 (best) BASIC12.86□□□□□ -0.351e-14■■■■■ 51.7
MATR3P43243 NXF1-203ENST00000526163 569 ntTSL 412.47□□□□□ -0.411e-14■■■■■ 51.7
MATR3P43243 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC20.9■□□□□ 0.942e-14■■■■■ 50.7
MATR3P43243 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.142e-14■■■■■ 50.7
MATR3P43243 RAP1GAP-213ENST00000611549 4294 ntTSL 515.26■□□□□ 0.032e-14■■■■■ 50.7
MATR3P43243 SMG6-201ENST00000263073 5960 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.162e-14■■■■■ 50.7
MATR3P43243 RAP1GAP-201ENST00000290101 3584 ntTSL 5 BASIC13.89□□□□□ -0.192e-14■■■■■ 50.7
MATR3P43243 RAP1GAP-205ENST00000374763 3334 ntTSL 1 (best) BASIC13.39□□□□□ -0.272e-14■■■■■ 50.7
MATR3P43243 RAP1GAP-206ENST00000374765 3271 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.312e-14■■■■■ 50.7
MATR3P43243 RAP1GAP-209ENST00000471600 3238 ntTSL 513.07□□□□□ -0.322e-14■■■■■ 50.7
MATR3P43243 RAP1GAP-212ENST00000542643 3426 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.552e-14■■■■■ 50.7
MATR3P43243 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC19.3■□□□□ 0.685e-14■■■■■ 49.7
MATR3P43243 LOXL3-206ENST00000413469 1001 ntTSL 318.1■□□□□ 0.495e-14■■■■■ 49.7
MATR3P43243 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC16.14■□□□□ 0.175e-14■■■■■ 49.7
MATR3P43243 LOXL3-204ENST00000409549 2897 ntTSL 2 BASIC14.6□□□□□ -0.075e-14■■■■■ 49.7
MATR3P43243 LOXL3-201ENST00000264094 3502 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.415e-14■■■■■ 49.7
MATR3P43243 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC17.59■□□□□ 0.415e-7■■■■■ 49.6
MATR3P43243 RNF24-201ENST00000336095 7453 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.055e-7■■■■■ 49.6
MATR3P43243 RNF24-202ENST00000358395 3242 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.195e-7■■■■■ 49.6
MATR3P43243 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.12e-7■■■■■ 49.4
MATR3P43243 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.062e-7■■■■■ 49.4
MATR3P43243 ARHGEF18-203ENST00000594665 4616 ntTSL 220.2■□□□□ 0.822e-7■■■■■ 49.4
MATR3P43243 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.812e-7■■■■■ 49.4
MATR3P43243 AC093752.1-202ENST00000510011 979 ntTSL 321.12■□□□□ 0.975e-14■■■■■ 48.8
MATR3P43243 AC093752.1-204ENST00000508519 849 ntTSL 317.84■□□□□ 0.455e-14■■■■■ 48.8
MATR3P43243 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC18.63■□□□□ 0.571e-7■■■■■ 48.5
MATR3P43243 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.551e-7■■■■■ 48.5
MATR3P43243 GLOD4-208ENST00000574554 1314 ntTSL 213.84□□□□□ -0.191e-7■■■■■ 48.5
MATR3P43243 GLOD4-201ENST00000301328 1809 ntTSL 1 (best) BASIC12.19□□□□□ -0.461e-7■■■■■ 48.5
MATR3P43243 GLOD4-215ENST00000576419 705 ntTSL 311.74□□□□□ -0.531e-7■■■■■ 48.5
MATR3P43243 GLOD4-204ENST00000571073 2311 ntTSL 29.85□□□□□ -0.831e-7■■■■■ 48.5
MATR3P43243 GLOD4-214ENST00000576239 2737 ntTSL 29.65□□□□□ -0.861e-7■■■■■ 48.5
MATR3P43243 GLOD4-213ENST00000575851 1063 ntTSL 39.2□□□□□ -0.941e-7■■■■■ 48.5
MATR3P43243 GLOD4-210ENST00000575528 585 ntTSL 28.38□□□□□ -1.071e-7■■■■■ 48.5
MATR3P43243 GLOD4-206ENST00000573137 447 ntTSL 35.28□□□□□ -1.561e-7■■■■■ 48.5
MATR3P43243 CMPK1-202ENST00000371871 1212 ntTSL 224.77■■□□□ 1.566e-13■■■■■ 46.7
MATR3P43243 CMPK1-201ENST00000371870 812 ntTSL 220.26■□□□□ 0.836e-13■■■■■ 46.7
MATR3P43243 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.36e-13■■■■■ 46.7
MATR3P43243 CMPK1-204ENST00000450808 950 ntTSL 2 BASIC14.31□□□□□ -0.126e-13■■■■■ 46.7
MATR3P43243 SORBS2-228ENST00000445343 546 ntTSL 45.63□□□□□ -1.512e-8■■■■■ 46.7
MATR3P43243 REEP5-201ENST00000261482 683 ntTSL 526.88■■□□□ 1.896e-14■■■■■ 46.5
MATR3P43243 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.486e-14■■■■■ 46.5
MATR3P43243 REEP5-203ENST00000474542 650 ntTSL 418.31■□□□□ 0.526e-14■■■■■ 46.5
MATR3P43243 REEP5-204ENST00000497856 1779 ntTSL 1 (best)15.69■□□□□ 0.16e-14■■■■■ 46.5
MATR3P43243 REEP5-205ENST00000504247 480 ntTSL 5 BASIC14.67□□□□□ -0.066e-14■■■■■ 46.5
MATR3P43243 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC14.67□□□□□ -0.066e-14■■■■■ 46.5
MATR3P43243 REEP5-206ENST00000511865 1187 ntTSL 213.21□□□□□ -0.296e-14■■■■■ 46.5
MATR3P43243 SLC25A37-201ENST00000290075 1889 ntTSL 1 (best)23.19■■□□□ 1.31e-7■■■■■ 46.4
MATR3P43243 SLC25A37-202ENST00000417331 735 ntTSL 521.5■■□□□ 1.031e-7■■■■■ 46.4
MATR3P43243 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.411e-7■■■■■ 46.4
MATR3P43243 SLC25A37-212ENST00000523930 823 ntTSL 516.55■□□□□ 0.241e-7■■■■■ 46.4
MATR3P43243 SLC25A37-204ENST00000518881 3404 ntTSL 1 (best)16.05■□□□□ 0.161e-7■■■■■ 46.4
MATR3P43243 SLC25A37-207ENST00000520654 3018 ntTSL 1 (best)10.59□□□□□ -0.711e-7■■■■■ 46.4
MATR3P43243 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC5.41□□□□□ -1.542e-7■■■■■ 45.4
MATR3P43243 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC26.56■■□□□ 1.841e-12■■■■■ 44.7
MATR3P43243 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.271e-12■■■■■ 44.7
MATR3P43243 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.111e-12■■■■■ 44.7
MATR3P43243 VRK2-205ENST00000432057 1870 ntTSL 1 (best)21.15■□□□□ 0.981e-12■■■■■ 44.7
MATR3P43243 VRK2-203ENST00000417641 2381 ntAPPRIS ALT2 TSL 2 BASIC8.73□□□□□ -1.011e-12■■■■■ 44.7
MATR3P43243 IARS-205ENST00000443024 4341 ntTSL 5 BASIC7.68□□□□□ -1.181e-7■■■■■ 44.7
MATR3P43243 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.211e-7■■■■■ 44.7
Retrieved 100 of 16,209 protein–RNA pairs in 55.1 ms