Protein–RNA interactions for Protein: Q9NQZ2

UTP3, Something about silencing protein 10, humanhuman

Known RBP eCLIP

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UTP3Q9NQZ2 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.152e-6■■■■□ 19.4
UTP3Q9NQZ2 CDK5RAP3-236ENST00000584991 1862 ntTSL 515.96■□□□□ 0.152e-6■■■■□ 19.4
UTP3Q9NQZ2 CDK5RAP3-237ENST00000585163 2519 ntTSL 1 (best)15.22■□□□□ 0.032e-6■■■■□ 19.4
UTP3Q9NQZ2 CDK5RAP3-202ENST00000536708 1975 ntTSL 2 BASIC13.89□□□□□ -0.192e-6■■■■□ 19.4
UTP3Q9NQZ2 CDK5RAP3-217ENST00000580287 2609 ntTSL 1 (best)13.79□□□□□ -0.22e-6■■■■□ 19.4
UTP3Q9NQZ2 AC018521.1-202ENST00000641877 2655 ntBASIC13.77□□□□□ -0.212e-6■■■■□ 19.4
UTP3Q9NQZ2 CDK5RAP3-231ENST00000584063 2759 ntTSL 1 (best)13.71□□□□□ -0.212e-6■■■■□ 19.4
UTP3Q9NQZ2 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC28.59■■■□□ 2.177e-7■■■■□ 19.4
UTP3Q9NQZ2 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC28.11■■■□□ 2.097e-7■■■■□ 19.4
UTP3Q9NQZ2 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC27.86■■■□□ 2.057e-7■■■■□ 19.4
UTP3Q9NQZ2 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC26.76■■□□□ 1.877e-7■■■■□ 19.4
UTP3Q9NQZ2 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC26.76■■□□□ 1.877e-7■■■■□ 19.4
UTP3Q9NQZ2 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC26.76■■□□□ 1.877e-7■■■■□ 19.4
UTP3Q9NQZ2 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC26.76■■□□□ 1.877e-7■■■■□ 19.4
UTP3Q9NQZ2 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC26.76■■□□□ 1.877e-7■■■■□ 19.4
UTP3Q9NQZ2 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC26.76■■□□□ 1.877e-7■■■■□ 19.4
UTP3Q9NQZ2 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC26.76■■□□□ 1.877e-7■■■■□ 19.4
UTP3Q9NQZ2 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC26.76■■□□□ 1.877e-7■■■■□ 19.4
UTP3Q9NQZ2 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC26.76■■□□□ 1.877e-7■■■■□ 19.4
UTP3Q9NQZ2 VEGFA-220ENST00000519767 970 ntTSL 1 (best)26.76■■□□□ 1.877e-7■■■■□ 19.4
UTP3Q9NQZ2 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.87e-7■■■■□ 19.4
UTP3Q9NQZ2 HNRNPC-228ENST00000557033 760 ntTSL 311.84□□□□□ -0.514e-7■■■■□ 19.3
UTP3Q9NQZ2 HNRNPC-215ENST00000555127 929 ntTSL 27.09□□□□□ -1.274e-7■■■■□ 19.3
UTP3Q9NQZ2 PTBP1-219ENST00000621737 1125 ntTSL 520.9■□□□□ 0.947e-7■■■■□ 19.3
UTP3Q9NQZ2 PTBP1-205ENST00000585535 314 ntTSL 312.08□□□□□ -0.487e-7■■■■□ 19.3
UTP3Q9NQZ2 BCAT1-207ENST00000543099 568 ntTSL 47.22□□□□□ -1.252e-7■■■■□ 19.3
UTP3Q9NQZ2 SMDT1-203ENST00000484235 556 ntTSL 1 (best)28.45■■■□□ 2.142e-6■■■□□ 19.2
UTP3Q9NQZ2 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.062e-6■■■□□ 19.2
UTP3Q9NQZ2 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.956e-8■■■□□ 19.2
UTP3Q9NQZ2 SMDT1-202ENST00000422252 591 ntTSL 227.06■■□□□ 1.922e-6■■■□□ 19.2
UTP3Q9NQZ2 EIF5A-210ENST00000575001 609 ntTSL 224.82■■□□□ 1.562e-10■■■□□ 19.2
UTP3Q9NQZ2 MED25-203ENST00000593595 506 ntTSL 224.67■■□□□ 1.542e-6■■■□□ 19.2
UTP3Q9NQZ2 NCAPD3-209ENST00000532445 532 ntAPPRIS ALT2 TSL 324.6■■□□□ 1.533e-7■■■□□ 19.2
UTP3Q9NQZ2 NCAPD3-211ENST00000534227 537 ntAPPRIS ALT2 TSL 423.7■■□□□ 1.383e-7■■■□□ 19.2
UTP3Q9NQZ2 NCAPD3-202ENST00000525485 555 ntAPPRIS ALT2 TSL 423.56■■□□□ 1.363e-7■■■□□ 19.2
UTP3Q9NQZ2 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC22.17■■□□□ 1.142e-6■■■□□ 19.2
UTP3Q9NQZ2 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.13e-7■■■□□ 19.2
UTP3Q9NQZ2 RAC3-202ENST00000580965 831 ntTSL 221.43■■□□□ 1.023e-7■■■□□ 19.2
UTP3Q9NQZ2 ABCB8-213ENST00000482309 1994 ntTSL 220.14■□□□□ 0.816e-8■■■□□ 19.2
UTP3Q9NQZ2 MYC-208ENST00000641036 567 ntBASIC19.87■□□□□ 0.776e-11■■■□□ 19.2
UTP3Q9NQZ2 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.722e-9■■■□□ 19.2
UTP3Q9NQZ2 MED25-204ENST00000593636 1012 ntTSL 219.1■□□□□ 0.652e-6■■■□□ 19.2
UTP3Q9NQZ2 NXF1-206ENST00000527902 619 ntTSL 319.09■□□□□ 0.652e-6■■■□□ 19.2
UTP3Q9NQZ2 NXF1-216ENST00000533499 936 ntTSL 518.84■□□□□ 0.612e-6■■■□□ 19.2
UTP3Q9NQZ2 FLNA-218ENST00000498491 914 ntTSL 518.7■□□□□ 0.584e-7■■■□□ 19.2
UTP3Q9NQZ2 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC18.57■□□□□ 0.566e-8■■■□□ 19.2
UTP3Q9NQZ2 NCAPD3-210ENST00000533155 727 ntTSL 318.32■□□□□ 0.523e-7■■■□□ 19.2
UTP3Q9NQZ2 ABCB8-215ENST00000488370 606 ntTSL 318.18■□□□□ 0.56e-8■■■□□ 19.2
UTP3Q9NQZ2 ABCB8-218ENST00000489192 762 ntTSL 518.02■□□□□ 0.486e-8■■■□□ 19.2
UTP3Q9NQZ2 ABCB8-208ENST00000470645 1722 ntTSL 216.44■□□□□ 0.226e-8■■■□□ 19.2
UTP3Q9NQZ2 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC16.21■□□□□ 0.196e-8■■■□□ 19.2
UTP3Q9NQZ2 RAC3-203ENST00000584341 730 ntTSL 516.18■□□□□ 0.183e-7■■■□□ 19.2
UTP3Q9NQZ2 NXF1-214ENST00000533048 922 ntTSL 515.85■□□□□ 0.132e-6■■■□□ 19.2
UTP3Q9NQZ2 CHORDC1-204ENST00000529402 809 ntTSL 315.76■□□□□ 0.112e-6■■■□□ 19.2
UTP3Q9NQZ2 ACCS-209ENST00000531940 1234 ntTSL 515.66■□□□□ 0.12e-6■■■□□ 19.2
UTP3Q9NQZ2 DNAJC4-205ENST00000536006 693 ntTSL 315.6■□□□□ 0.092e-6■■■□□ 19.2
UTP3Q9NQZ2 NOP53-206ENST00000598285 265 ntTSL 215.52■□□□□ 0.082e-6■■■□□ 19.2
UTP3Q9NQZ2 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.063e-7■■■□□ 19.2
UTP3Q9NQZ2 TMEM123-202ENST00000398136 3579 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.033e-7■■■□□ 19.2
UTP3Q9NQZ2 NASP-207ENST00000464190 604 ntTSL 214.82□□□□□ -0.042e-6■■■□□ 19.2
UTP3Q9NQZ2 ABCB8-217ENST00000488826 562 ntTSL 314.82□□□□□ -0.046e-8■■■□□ 19.2
UTP3Q9NQZ2 NAT10-207ENST00000532503 556 ntTSL 414.5□□□□□ -0.092e-6■■■□□ 19.2
UTP3Q9NQZ2 ABCB8-203ENST00000461373 537 ntTSL 414.17□□□□□ -0.146e-8■■■□□ 19.2
UTP3Q9NQZ2 ABCB8-206ENST00000466956 574 ntTSL 414.05□□□□□ -0.166e-8■■■□□ 19.2
UTP3Q9NQZ2 MAN2A2-222ENST00000560505 643 ntTSL 213.81□□□□□ -0.22e-9■■■□□ 19.2
UTP3Q9NQZ2 C11orf58-202ENST00000524439 405 ntTSL 313.77□□□□□ -0.212e-9■■■□□ 19.2
UTP3Q9NQZ2 C11orf58-207ENST00000525684 575 ntTSL 2 BASIC13.74□□□□□ -0.212e-9■■■□□ 19.2
UTP3Q9NQZ2 C11orf58-209ENST00000528634 776 ntTSL 5 BASIC13.74□□□□□ -0.212e-9■■■□□ 19.2
UTP3Q9NQZ2 C11orf58-206ENST00000525256 762 ntTSL 213.64□□□□□ -0.232e-9■■■□□ 19.2
UTP3Q9NQZ2 NUP160-208ENST00000529863 348 ntTSL 513.37□□□□□ -0.272e-6■■■□□ 19.2
UTP3Q9NQZ2 SRRM1-216ENST00000489130 513 ntTSL 213.31□□□□□ -0.282e-7■■■□□ 19.2
UTP3Q9NQZ2 CHORDC1-208ENST00000533062 575 ntTSL 412.33□□□□□ -0.442e-6■■■□□ 19.2
UTP3Q9NQZ2 NPEPPS-201ENST00000322157 4353 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.473e-7■■■□□ 19.2
UTP3Q9NQZ2 SNRPA1-211ENST00000560433 2440 ntTSL 211.93□□□□□ -0.56e-8■■■□□ 19.2
UTP3Q9NQZ2 CEP85-205ENST00000469609 2384 ntTSL 1 (best)11.77□□□□□ -0.522e-6■■■□□ 19.2
UTP3Q9NQZ2 BRPF3-209ENST00000532330 4077 ntTSL 511.63□□□□□ -0.552e-6■■■□□ 19.2
UTP3Q9NQZ2 MAN2A2-217ENST00000559965 537 ntTSL 411.4□□□□□ -0.583e-7■■■□□ 19.2
UTP3Q9NQZ2 SLC43A3-218ENST00000530232 389 ntTSL 311.36□□□□□ -0.592e-6■■■□□ 19.2
UTP3Q9NQZ2 ABCB8-220ENST00000493338 694 ntTSL 311.3□□□□□ -0.66e-8■■■□□ 19.2
UTP3Q9NQZ2 BRPF3-211ENST00000534400 4254 ntTSL 5 BASIC11.29□□□□□ -0.62e-6■■■□□ 19.2
UTP3Q9NQZ2 TRIP13-205ENST00000510412 571 ntTSL 511.13□□□□□ -0.632e-6■■■□□ 19.2
UTP3Q9NQZ2 ABCB8-216ENST00000488551 552 ntTSL 411.12□□□□□ -0.636e-8■■■□□ 19.2
UTP3Q9NQZ2 CHORDC1-202ENST00000457199 2003 ntTSL 1 (best) BASIC10.96□□□□□ -0.652e-6■■■□□ 19.2
UTP3Q9NQZ2 SNRPA1-212ENST00000560496 824 ntTSL 510.74□□□□□ -0.696e-8■■■□□ 19.2
UTP3Q9NQZ2 C11orf58-208ENST00000527893 813 ntTSL 410.68□□□□□ -0.72e-9■■■□□ 19.2
UTP3Q9NQZ2 CHORDC1-207ENST00000530765 564 ntTSL 4 BASIC10.68□□□□□ -0.72e-6■■■□□ 19.2
UTP3Q9NQZ2 RAB5B-206ENST00000549505 3148 ntTSL 1 (best)10.54□□□□□ -0.723e-7■■■□□ 19.2
UTP3Q9NQZ2 DDX42-215ENST00000582985 543 ntTSL 410.06□□□□□ -0.83e-7■■■□□ 19.2
UTP3Q9NQZ2 CHORDC1-203ENST00000525317 1136 ntTSL 59.56□□□□□ -0.882e-6■■■□□ 19.2
UTP3Q9NQZ2 SNRPA1-208ENST00000559686 625 ntTSL 29.45□□□□□ -0.96e-8■■■□□ 19.2
UTP3Q9NQZ2 NPEPPS-216ENST00000530514 2092 ntTSL 29.41□□□□□ -0.93e-7■■■□□ 19.2
UTP3Q9NQZ2 DDX42-207ENST00000578593 2919 ntTSL 29.03□□□□□ -0.963e-7■■■□□ 19.2
UTP3Q9NQZ2 DDX42-214ENST00000581767 2244 nt9.03□□□□□ -0.963e-7■■■□□ 19.2
UTP3Q9NQZ2 RAB5B-210ENST00000553116 3322 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.973e-7■■■□□ 19.2
UTP3Q9NQZ2 TRIP13-202ENST00000508430 306 ntTSL 38.97□□□□□ -0.972e-6■■■□□ 19.2
UTP3Q9NQZ2 USP15-205ENST00000546694 799 ntTSL 58.93□□□□□ -0.982e-6■■■□□ 19.2
UTP3Q9NQZ2 TRIP13-204ENST00000509210 303 ntTSL 38.61□□□□□ -1.032e-6■■■□□ 19.2
UTP3Q9NQZ2 NXF1-205ENST00000527497 529 ntTSL 28.55□□□□□ -1.042e-6■■■□□ 19.2
UTP3Q9NQZ2 CHORDC1-210ENST00000533739 582 ntTSL 28.54□□□□□ -1.042e-6■■■□□ 19.2
UTP3Q9NQZ2 HMBOX1-204ENST00000517386 761 ntTSL 48.36□□□□□ -1.072e-9■■■□□ 19.2
Retrieved 100 of 52,753 protein–RNA pairs in 4221.4 ms