RNA–Protein interactions for RNA: ENST00000546694.1

USP15-205, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 5

Gene USP15, Length 799 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-205ENST00000546694 AEBP2Q6ZN18 517 aaPredicted RBP29.22■■■□□ 2.27
USP15-205ENST00000546694 CHIC1Q5VXU3 224 aa27.75■■■□□ 2.03
USP15-205ENST00000546694 SENP3Q9H4L4 574 aaPredicted RBP24.79■■□□□ 1.56
USP15-205ENST00000546694 PHF23Q9BUL5 403 aaPredicted RBP24.52■■□□□ 1.52
USP15-205ENST00000546694 FOXD1Q16676 465 aa23.17■■□□□ 1.3
USP15-205ENST00000546694 PLPPR3Q6T4P5 718 aa22.13■■□□□ 1.13
USP15-205ENST00000546694 PPP6R1Q9UPN7 881 aa21.76■■□□□ 1.07
USP15-205ENST00000546694 ADRA2BP18089 450 aa21.64■■□□□ 1.05
USP15-205ENST00000546694 PIAS4Q8N2W9 510 aaPredicted RBP21.59■■□□□ 1.05
USP15-205ENST00000546694 MSH5O43196 834 aa21.58■■□□□ 1.05
USP15-205ENST00000546694 POTEDQ86YR6 584 aa21.03■□□□□ 0.96
USP15-205ENST00000546694 MAPK8IP2Q13387 824 aaPredicted RBP19.88■□□□□ 0.77
USP15-205ENST00000546694 DMRT2Q9Y5R5 561 aa19.72■□□□□ 0.75
USP15-205ENST00000546694 SCAF1Q9H7N4 1312 aaKnown RBP19.68■□□□□ 0.74
USP15-205ENST00000546694 PPP4R3CPQ6ZMV5 832 aa19.44■□□□□ 0.7
USP15-205ENST00000546694 HOXD11P31277 338 aaPredicted RBP19.04■□□□□ 0.64
USP15-205ENST00000546694 CNKSR2Q8WXI2 1034 aa19.04■□□□□ 0.64
USP15-205ENST00000546694 RNF216Q9NWF9 866 aaPredicted RBP18.87■□□□□ 0.61
USP15-205ENST00000546694 DCAF8L1A6NGE4 600 aa18.77■□□□□ 0.6
USP15-205ENST00000546694 NCBP3Q53F19 620 aaKnown RBP18.63■□□□□ 0.57
USP15-205ENST00000546694 RNF39Q9H2S5 420 aa18.49■□□□□ 0.55
USP15-205ENST00000546694 NPM3O75607 178 aaKnown RBP18.46■□□□□ 0.55
USP15-205ENST00000546694 CACNB1Q02641 598 aaPredicted RBP18.45■□□□□ 0.54
USP15-205ENST00000546694 DNAJC5BQ9UF47 199 aa18.37■□□□□ 0.53
USP15-205ENST00000546694 KCNA4P22459 653 aa18.17■□□□□ 0.5
USP15-205ENST00000546694 C1QBPQ07021 282 aaKnown RBP18.17■□□□□ 0.5
USP15-205ENST00000546694 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.03■□□□□ 0.48
USP15-205ENST00000546694 U3KPZ7 1027 aaPredicted RBP17.75■□□□□ 0.43
USP15-205ENST00000546694 SLC4A2P04920 1241 aa17.66■□□□□ 0.42
USP15-205ENST00000546694 SPINK5Q9NQ38 1064 aaPredicted RBP17.48■□□□□ 0.39
USP15-205ENST00000546694 CAPN15O75808 1086 aa17.35■□□□□ 0.37
USP15-205ENST00000546694 DSG3P32926 999 aa17.33■□□□□ 0.36
USP15-205ENST00000546694 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.14■□□□□ 0.33
USP15-205ENST00000546694 HNRNPUL2Q1KMD3 747 aaKnown RBP17.14■□□□□ 0.33
USP15-205ENST00000546694 APLP2Q06481 763 aa17.11■□□□□ 0.33
USP15-205ENST00000546694 SLC4A1APQ9BWU0 796 aaKnown RBP17.1■□□□□ 0.33
USP15-205ENST00000546694 TRHP20396 242 aaPredicted RBP17.09■□□□□ 0.33
USP15-205ENST00000546694 SAMD1Q6SPF0 538 aaPredicted RBP17.08■□□□□ 0.32
USP15-205ENST00000546694 ZNF219Q9P2Y4 722 aaPredicted RBP17.06■□□□□ 0.32
USP15-205ENST00000546694 MYCNP04198 464 aaPredicted RBP17.03■□□□□ 0.32
USP15-205ENST00000546694 ABCB7O75027 752 aa16.99■□□□□ 0.31
USP15-205ENST00000546694 FOXD4L1Q9NU39 408 aa16.89■□□□□ 0.29
USP15-205ENST00000546694 ZBTB22O15209 634 aa16.77■□□□□ 0.28
USP15-205ENST00000546694 ATF5Q9Y2D1 282 aaPredicted RBP16.72■□□□□ 0.27
USP15-205ENST00000546694 POLA2Q14181 598 aa16.68■□□□□ 0.26
USP15-205ENST00000546694 POTEHQ6S545 545 aa16.46■□□□□ 0.23
USP15-205ENST00000546694 RBM42Q9BTD8 480 aaKnown RBP16.43■□□□□ 0.22
USP15-205ENST00000546694 ATXN8OSP0DMR3 200 aa16.38■□□□□ 0.21
USP15-205ENST00000546694 ZBTB12Q9Y330 459 aaPredicted RBP16.3■□□□□ 0.2
USP15-205ENST00000546694 OSCARQ8IYS5 282 aa16.16■□□□□ 0.18
USP15-205ENST00000546694 AKT1S1Q96B36 256 aa16.12■□□□□ 0.17
USP15-205ENST00000546694 CHRDL2Q6WN34 429 aa16.1■□□□□ 0.17
USP15-205ENST00000546694 CSRNP3Q8WYN3 585 aa16■□□□□ 0.15
USP15-205ENST00000546694 REM2Q8IYK8 340 aaPredicted RBP15.99■□□□□ 0.15
USP15-205ENST00000546694 MKRN4PQ13434 485 aaPredicted RBP15.96■□□□□ 0.15
USP15-205ENST00000546694 FBLN2P98095 1184 aa15.9■□□□□ 0.14
USP15-205ENST00000546694 SPDYE2BA6NHP3 402 aa15.84■□□□□ 0.13
USP15-205ENST00000546694 SPDYE6P0CI01 402 aa15.84■□□□□ 0.13
USP15-205ENST00000546694 SPDYE2Q495Y8 402 aa15.84■□□□□ 0.13
USP15-205ENST00000546694 PITPNM1O00562 1244 aa15.83■□□□□ 0.12
USP15-205ENST00000546694 PIP4P2Q8N4L2 257 aa15.77■□□□□ 0.12
USP15-205ENST00000546694 EHMT2Q96KQ7 1210 aa15.77■□□□□ 0.12
USP15-205ENST00000546694 FXR2P51116 673 aaKnown RBP eCLIP15.7■□□□□ 0.1
USP15-205ENST00000546694 SSUH2Q9Y2M2 353 aa15.7■□□□□ 0.1
USP15-205ENST00000546694 ZNF692Q9BU19 519 aaPredicted RBP15.64■□□□□ 0.09
USP15-205ENST00000546694 SPDYE1Q8NFV5 336 aaPredicted RBP15.52■□□□□ 0.08
USP15-205ENST00000546694 CLEC11AQ9Y240 323 aa15.46■□□□□ 0.07
USP15-205ENST00000546694 SP7Q8TDD2 431 aaPredicted RBP15.45■□□□□ 0.06
USP15-205ENST00000546694 PABPN1Q86U42 306 aaKnown RBP eCLIP15.43■□□□□ 0.06
USP15-205ENST00000546694 HAX1O00165 279 aa15.38■□□□□ 0.05
USP15-205ENST00000546694 PRKAR2AP13861 404 aaKnown RBP15.38■□□□□ 0.05
USP15-205ENST00000546694 EVX2Q03828 476 aa15.34■□□□□ 0.05
USP15-205ENST00000546694 CHADLQ6NUI6 762 aa15.24■□□□□ 0.03
USP15-205ENST00000546694 PRR29P0C7W0 189 aa15.23■□□□□ 0.03
USP15-205ENST00000546694 C19orf67A6NJJ6 358 aa15.19■□□□□ 0.02
USP15-205ENST00000546694 SPDYE4A6NLX3 237 aa15.13■□□□□ 0.01
USP15-205ENST00000546694 FARP1Q9Y4F1 1045 aaPredicted RBP15.02■□□□□ -0
USP15-205ENST00000546694 STAG3Q9UJ98 1225 aa14.98□□□□□ -0.01
USP15-205ENST00000546694 CREBZFQ9NS37 354 aa14.97□□□□□ -0.01
USP15-205ENST00000546694 GABBR2O75899 941 aa14.93□□□□□ -0.02
USP15-205ENST00000546694 PROM2Q8N271 834 aa14.9□□□□□ -0.02
USP15-205ENST00000546694 CD44P16070 742 aaKnown RBP14.89□□□□□ -0.03
USP15-205ENST00000546694 MNX1P50219 401 aaPredicted RBP14.77□□□□□ -0.05
USP15-205ENST00000546694 ZNF579Q8NAF0 562 aaKnown RBP14.71□□□□□ -0.05
USP15-205ENST00000546694 POTEIP0CG38 1075 aa14.68□□□□□ -0.06
USP15-205ENST00000546694 ZRANB1Q9UGI0 708 aa14.67□□□□□ -0.06
USP15-205ENST00000546694 CLCN6P51797 869 aa14.65□□□□□ -0.06
USP15-205ENST00000546694 NPM1P06748 294 aaKnown RBP eCLIP14.58□□□□□ -0.08
USP15-205ENST00000546694 GALR2O43603 387 aaPredicted RBP14.52□□□□□ -0.09
USP15-205ENST00000546694 PHF12Q96QT6 1004 aa14.52□□□□□ -0.09
USP15-205ENST00000546694 PAK3O75914 559 aaPredicted RBP14.49□□□□□ -0.09
USP15-205ENST00000546694 LHX8Q68G74 356 aa14.48□□□□□ -0.09
USP15-205ENST00000546694 DCBLD2Q96PD2 775 aa14.44□□□□□ -0.1
USP15-205ENST00000546694 FKBP8Q14318 412 aa14.43□□□□□ -0.1
USP15-205ENST00000546694 MIER1Q8N108 512 aa14.4□□□□□ -0.1
USP15-205ENST00000546694 TSPYL2Q9H2G4 693 aaPredicted RBP14.35□□□□□ -0.11
USP15-205ENST00000546694 CCDC61Q9Y6R9 512 aa14.35□□□□□ -0.11
USP15-205ENST00000546694 MS4A3Q96HJ5 214 aa14.33□□□□□ -0.12
USP15-205ENST00000546694 RASEFQ8IZ41 740 aa14.31□□□□□ -0.12
USP15-205ENST00000546694 PLEKHG5O94827 1062 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms