RNA–Protein interactions for RNA: ENST00000527497.1

NXF1-205, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-205ENST00000527497 CHIC1Q5VXU3 224 aa18.64■□□□□ 0.57
NXF1-205ENST00000527497 AEBP2Q6ZN18 517 aaPredicted RBP17.97■□□□□ 0.47
NXF1-205ENST00000527497 PHF23Q9BUL5 403 aaPredicted RBP16.46■□□□□ 0.23
NXF1-205ENST00000527497 PLPPR3Q6T4P5 718 aa15.62■□□□□ 0.09
NXF1-205ENST00000527497 SENP3Q9H4L4 574 aaPredicted RBP15.13■□□□□ 0.01
NXF1-205ENST00000527497 EHMT2Q96KQ7 1210 aa15.05■□□□□ -0
NXF1-205ENST00000527497 KCNA4P22459 653 aa14.75□□□□□ -0.05
NXF1-205ENST00000527497 ADRA2BP18089 450 aa14.51□□□□□ -0.09
NXF1-205ENST00000527497 CSRNP3Q8WYN3 585 aa14.39□□□□□ -0.11
NXF1-205ENST00000527497 SLC4A1APQ9BWU0 796 aaKnown RBP14.26□□□□□ -0.13
NXF1-205ENST00000527497 PPP6R1Q9UPN7 881 aa14.16□□□□□ -0.14
NXF1-205ENST00000527497 SLC24A1O60721 1099 aa14.13□□□□□ -0.15
NXF1-205ENST00000527497 FOXD1Q16676 465 aa13.88□□□□□ -0.19
NXF1-205ENST00000527497 PPP4R3CPQ6ZMV5 832 aa13.88□□□□□ -0.19
NXF1-205ENST00000527497 NCBP3Q53F19 620 aaKnown RBP13.86□□□□□ -0.19
NXF1-205ENST00000527497 AMER1Q5JTC6 1135 aaPredicted RBP13.72□□□□□ -0.21
NXF1-205ENST00000527497 RTN4Q9NQC3 1192 aaKnown RBP13.67□□□□□ -0.22
NXF1-205ENST00000527497 NPM3O75607 178 aaKnown RBP13.62□□□□□ -0.23
NXF1-205ENST00000527497 ZBTB22O15209 634 aa13.58□□□□□ -0.24
NXF1-205ENST00000527497 PIAS4Q8N2W9 510 aaPredicted RBP13.36□□□□□ -0.27
NXF1-205ENST00000527497 FOXD4L1Q9NU39 408 aa13.31□□□□□ -0.28
NXF1-205ENST00000527497 CNKSR2Q8WXI2 1034 aa13.27□□□□□ -0.29
NXF1-205ENST00000527497 DNAJC5BQ9UF47 199 aa13.13□□□□□ -0.31
NXF1-205ENST00000527497 SCAF1Q9H7N4 1312 aaKnown RBP13.07□□□□□ -0.32
NXF1-205ENST00000527497 FKBP8Q14318 412 aa12.95□□□□□ -0.34
NXF1-205ENST00000527497 ATXN8OSP0DMR3 200 aa12.77□□□□□ -0.37
NXF1-205ENST00000527497 RNF216Q9NWF9 866 aaPredicted RBP12.75□□□□□ -0.37
NXF1-205ENST00000527497 MYCNP04198 464 aaPredicted RBP12.59□□□□□ -0.39
NXF1-205ENST00000527497 SLC4A2P04920 1241 aa12.59□□□□□ -0.39
NXF1-205ENST00000527497 PLCB2Q00722 1185 aa12.58□□□□□ -0.4
NXF1-205ENST00000527497 MAPK8IP2Q13387 824 aaPredicted RBP12.57□□□□□ -0.4
NXF1-205ENST00000527497 BCANQ96GW7 911 aa12.48□□□□□ -0.41
NXF1-205ENST00000527497 MSH5O43196 834 aa12.42□□□□□ -0.42
NXF1-205ENST00000527497 HOXD11P31277 338 aaPredicted RBP12.42□□□□□ -0.42
NXF1-205ENST00000527497 HAP1P54257 671 aaPredicted RBP12.39□□□□□ -0.43
NXF1-205ENST00000527497 PRKCSHP14314 528 aaPredicted RBP12.36□□□□□ -0.43
NXF1-205ENST00000527497 TAOK2Q9UL54 1235 aa12.34□□□□□ -0.43
NXF1-205ENST00000527497 VSIG10Q8N0Z9 540 aa12.27□□□□□ -0.45
NXF1-205ENST00000527497 FBXO3Q9UK99 471 aa12.25□□□□□ -0.45
NXF1-205ENST00000527497 DMRT2Q9Y5R5 561 aa12.25□□□□□ -0.45
NXF1-205ENST00000527497 DCAF8L2P0C7V8 631 aa12.14□□□□□ -0.47
NXF1-205ENST00000527497 TPRNQ4KMQ1 711 aa12.12□□□□□ -0.47
NXF1-205ENST00000527497 ATF5Q9Y2D1 282 aaPredicted RBP12.11□□□□□ -0.47
NXF1-205ENST00000527497 VASPP50552 380 aaPredicted RBP12.02□□□□□ -0.49
NXF1-205ENST00000527497 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.01□□□□□ -0.49
NXF1-205ENST00000527497 HNRNPUL2Q1KMD3 747 aaKnown RBP12.01□□□□□ -0.49
NXF1-205ENST00000527497 SAMD1Q6SPF0 538 aaPredicted RBP12.01□□□□□ -0.49
NXF1-205ENST00000527497 POTEDQ86YR6 584 aa11.97□□□□□ -0.49
NXF1-205ENST00000527497 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.95□□□□□ -0.5
NXF1-205ENST00000527497 KDM2AQ9Y2K7 1162 aa11.95□□□□□ -0.5
NXF1-205ENST00000527497 SPDYE4A6NLX3 237 aa11.93□□□□□ -0.5
NXF1-205ENST00000527497 PKD2Q13563 968 aa11.93□□□□□ -0.5
NXF1-205ENST00000527497 IFNLR1Q8IU57 520 aaPredicted RBP11.91□□□□□ -0.5
NXF1-205ENST00000527497 PROM2Q8N271 834 aa11.91□□□□□ -0.5
NXF1-205ENST00000527497 BBXQ8WY36 941 aaPredicted RBP11.91□□□□□ -0.5
NXF1-205ENST00000527497 FBLN2P98095 1184 aa11.86□□□□□ -0.51
NXF1-205ENST00000527497 PAXIP1Q6ZW49 1069 aaPredicted RBP11.82□□□□□ -0.52
NXF1-205ENST00000527497 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.82□□□□□ -0.52
NXF1-205ENST00000527497 ZNF219Q9P2Y4 722 aaPredicted RBP11.82□□□□□ -0.52
NXF1-205ENST00000527497 DAXXQ9UER7 740 aaPredicted RBP11.81□□□□□ -0.52
NXF1-205ENST00000527497 TIMELESSQ9UNS1 1208 aa11.8□□□□□ -0.52
NXF1-205ENST00000527497 CFAP44Q96MT7 982 aa11.78□□□□□ -0.52
NXF1-205ENST00000527497 ARXQ96QS3 562 aa11.78□□□□□ -0.52
NXF1-205ENST00000527497 ERICH6Q7L0X2 663 aa11.74□□□□□ -0.53
NXF1-205ENST00000527497 U3KPZ7 1027 aaPredicted RBP11.74□□□□□ -0.53
NXF1-205ENST00000527497 TULP1O00294 542 aaPredicted RBP11.73□□□□□ -0.53
NXF1-205ENST00000527497 NPM1P06748 294 aaKnown RBP eCLIP11.71□□□□□ -0.53
NXF1-205ENST00000527497 ECM2O94769 699 aaPredicted RBP11.68□□□□□ -0.54
NXF1-205ENST00000527497 SPRYD3Q8NCJ5 442 aa11.68□□□□□ -0.54
NXF1-205ENST00000527497 GTF3C3Q9Y5Q9 886 aa11.67□□□□□ -0.54
NXF1-205ENST00000527497 MKRN4PQ13434 485 aaPredicted RBP11.66□□□□□ -0.54
NXF1-205ENST00000527497 NBR1Q14596 966 aa11.66□□□□□ -0.54
NXF1-205ENST00000527497 APLP2Q06481 763 aa11.65□□□□□ -0.54
NXF1-205ENST00000527497 TSHZ2Q9NRE2 1034 aa11.65□□□□□ -0.54
NXF1-205ENST00000527497 SPOCK2Q92563 424 aa11.63□□□□□ -0.55
NXF1-205ENST00000527497 DCAF8L1A6NGE4 600 aa11.62□□□□□ -0.55
NXF1-205ENST00000527497 DNAJC5Q9H3Z4 198 aa11.57□□□□□ -0.56
NXF1-205ENST00000527497 KLHL34Q8N239 644 aa11.56□□□□□ -0.56
NXF1-205ENST00000527497 RGL2O15211 777 aa11.51□□□□□ -0.57
NXF1-205ENST00000527497 HOMEZQ8IX15 550 aa11.49□□□□□ -0.57
NXF1-205ENST00000527497 TMEM132AQ24JP5 1023 aa11.45□□□□□ -0.58
NXF1-205ENST00000527497 CHGAP10645 457 aaKnown RBP11.42□□□□□ -0.58
NXF1-205ENST00000527497 STAG3Q9UJ98 1225 aa11.36□□□□□ -0.59
NXF1-205ENST00000527497 C14orf37Q86TY3 774 aa11.35□□□□□ -0.59
NXF1-205ENST00000527497 PLCD3Q8N3E9 789 aa11.31□□□□□ -0.6
NXF1-205ENST00000527497 HS6ST3Q8IZP7 471 aa11.3□□□□□ -0.6
NXF1-205ENST00000527497 POLA2Q14181 598 aa11.26□□□□□ -0.61
NXF1-205ENST00000527497 TRIM41Q8WV44 630 aa11.26□□□□□ -0.61
NXF1-205ENST00000527497 CIZ1Q9ULV3 898 aaPredicted RBP11.24□□□□□ -0.61
NXF1-205ENST00000527497 ZBTB12Q9Y330 459 aaPredicted RBP11.22□□□□□ -0.61
NXF1-205ENST00000527497 TRHP20396 242 aaPredicted RBP11.19□□□□□ -0.62
NXF1-205ENST00000527497 MIER1Q8N108 512 aa11.19□□□□□ -0.62
NXF1-205ENST00000527497 ZBTB47Q9UFB7 747 aaPredicted RBP11.15□□□□□ -0.62
NXF1-205ENST00000527497 GTPBP6O43824 516 aaPredicted RBP11.1□□□□□ -0.63
NXF1-205ENST00000527497 PLEKHG5O94827 1062 aa11.1□□□□□ -0.63
NXF1-205ENST00000527497 NKX1-1Q15270 411 aaPredicted RBP11.08□□□□□ -0.64
NXF1-205ENST00000527497 ZNF692Q9BU19 519 aaPredicted RBP11.08□□□□□ -0.64
NXF1-205ENST00000527497 SPINK5Q9NQ38 1064 aaPredicted RBP11.07□□□□□ -0.64
NXF1-205ENST00000527497 P3H3Q8IVL6 736 aa11.06□□□□□ -0.64
NXF1-205ENST00000527497 RNF25Q96BH1 459 aaPredicted RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms