RNA–Protein interactions for RNA: ENST00000555127.1

HNRNPC-215, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 929 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-215ENST00000555127 AEBP2Q6ZN18 517 aaPredicted RBP26.01■■□□□ 1.75
HNRNPC-215ENST00000555127 CHIC1Q5VXU3 224 aa24.1■■□□□ 1.45
HNRNPC-215ENST00000555127 SENP3Q9H4L4 574 aaPredicted RBP22.1■■□□□ 1.13
HNRNPC-215ENST00000555127 PHF23Q9BUL5 403 aaPredicted RBP21.83■■□□□ 1.09
HNRNPC-215ENST00000555127 FOXD1Q16676 465 aa20.8■□□□□ 0.92
HNRNPC-215ENST00000555127 POTEDQ86YR6 584 aa20.31■□□□□ 0.84
HNRNPC-215ENST00000555127 MSH5O43196 834 aa19.56■□□□□ 0.72
HNRNPC-215ENST00000555127 PIAS4Q8N2W9 510 aaPredicted RBP19.24■□□□□ 0.67
HNRNPC-215ENST00000555127 PPP6R1Q9UPN7 881 aa19.04■□□□□ 0.64
HNRNPC-215ENST00000555127 ADRA2BP18089 450 aa18.92■□□□□ 0.62
HNRNPC-215ENST00000555127 PLPPR3Q6T4P5 718 aa18.8■□□□□ 0.6
HNRNPC-215ENST00000555127 MAPK8IP2Q13387 824 aaPredicted RBP17.62■□□□□ 0.41
HNRNPC-215ENST00000555127 DMRT2Q9Y5R5 561 aa17.47■□□□□ 0.39
HNRNPC-215ENST00000555127 CACNB1Q02641 598 aaPredicted RBP17.25■□□□□ 0.35
HNRNPC-215ENST00000555127 SCAF1Q9H7N4 1312 aaKnown RBP17.09■□□□□ 0.33
HNRNPC-215ENST00000555127 DCAF8L1A6NGE4 600 aa16.84■□□□□ 0.29
HNRNPC-215ENST00000555127 RNF39Q9H2S5 420 aa16.7■□□□□ 0.26
HNRNPC-215ENST00000555127 HOXD11P31277 338 aaPredicted RBP16.56■□□□□ 0.24
HNRNPC-215ENST00000555127 PPP4R3CPQ6ZMV5 832 aa16.47■□□□□ 0.23
HNRNPC-215ENST00000555127 C1QBPQ07021 282 aaKnown RBP16.36■□□□□ 0.21
HNRNPC-215ENST00000555127 RNF216Q9NWF9 866 aaPredicted RBP16.25■□□□□ 0.19
HNRNPC-215ENST00000555127 CNKSR2Q8WXI2 1034 aa16.24■□□□□ 0.19
HNRNPC-215ENST00000555127 NISCHQ9Y2I1 1504 aa16.08■□□□□ 0.16
HNRNPC-215ENST00000555127 DNAJC5BQ9UF47 199 aa15.99■□□□□ 0.15
HNRNPC-215ENST00000555127 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.8■□□□□ 0.123e-23■□□□□ 9
HNRNPC-215ENST00000555127 POTEHQ6S545 545 aa15.76■□□□□ 0.11
HNRNPC-215ENST00000555127 NCBP3Q53F19 620 aaKnown RBP15.52■□□□□ 0.08
HNRNPC-215ENST00000555127 DSG3P32926 999 aa15.46■□□□□ 0.07
HNRNPC-215ENST00000555127 SPINK5Q9NQ38 1064 aaPredicted RBP15.46■□□□□ 0.07
HNRNPC-215ENST00000555127 U3KPZ7 1027 aaPredicted RBP15.45■□□□□ 0.06
HNRNPC-215ENST00000555127 NPM3O75607 178 aaKnown RBP15.44■□□□□ 0.06
HNRNPC-215ENST00000555127 CAPN15O75808 1086 aa15.39■□□□□ 0.05
HNRNPC-215ENST00000555127 ABCB7O75027 752 aa15.05■□□□□ -0
HNRNPC-215ENST00000555127 TRHP20396 242 aaPredicted RBP15.02■□□□□ -0
HNRNPC-215ENST00000555127 SLC4A2P04920 1241 aa14.95□□□□□ -0.02
HNRNPC-215ENST00000555127 ZNF219Q9P2Y4 722 aaPredicted RBP14.84□□□□□ -0.03
HNRNPC-215ENST00000555127 APLP2Q06481 763 aa14.71□□□□□ -0.05
HNRNPC-215ENST00000555127 CHRDL2Q6WN34 429 aa14.67□□□□□ -0.06
HNRNPC-215ENST00000555127 KCNA4P22459 653 aa14.63□□□□□ -0.07
HNRNPC-215ENST00000555127 RBM42Q9BTD8 480 aaKnown RBP14.62□□□□□ -0.07
HNRNPC-215ENST00000555127 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.6□□□□□ -0.07
HNRNPC-215ENST00000555127 HNRNPUL2Q1KMD3 747 aaKnown RBP14.6□□□□□ -0.07
HNRNPC-215ENST00000555127 SAMD1Q6SPF0 538 aaPredicted RBP14.53□□□□□ -0.08
HNRNPC-215ENST00000555127 POLA2Q14181 598 aa14.46□□□□□ -0.09
HNRNPC-215ENST00000555127 SP7Q8TDD2 431 aaPredicted RBP14.46□□□□□ -0.09
HNRNPC-215ENST00000555127 PIP4P2Q8N4L2 257 aa14.22□□□□□ -0.13
HNRNPC-215ENST00000555127 AKT1S1Q96B36 256 aa14.21□□□□□ -0.13
HNRNPC-215ENST00000555127 MYCNP04198 464 aaPredicted RBP14.2□□□□□ -0.14
HNRNPC-215ENST00000555127 REM2Q8IYK8 340 aaPredicted RBP14.16□□□□□ -0.14
HNRNPC-215ENST00000555127 CCDC180Q9P1Z9 1646 aa14.12□□□□□ -0.15
HNRNPC-215ENST00000555127 HAX1O00165 279 aa14.12□□□□□ -0.15
HNRNPC-215ENST00000555127 ATF5Q9Y2D1 282 aaPredicted RBP14.11□□□□□ -0.15
HNRNPC-215ENST00000555127 OSCARQ8IYS5 282 aa14.05□□□□□ -0.16
HNRNPC-215ENST00000555127 PITPNM1O00562 1244 aa14.03□□□□□ -0.16
HNRNPC-215ENST00000555127 EVX2Q03828 476 aa14.02□□□□□ -0.17
HNRNPC-215ENST00000555127 FXR2P51116 673 aaKnown RBP eCLIP14□□□□□ -0.17
HNRNPC-215ENST00000555127 ZBTB12Q9Y330 459 aaPredicted RBP13.94□□□□□ -0.18
HNRNPC-215ENST00000555127 ABCC9O60706 1549 aa13.86□□□□□ -0.19
HNRNPC-215ENST00000555127 FOXD4L1Q9NU39 408 aa13.74□□□□□ -0.21
HNRNPC-215ENST00000555127 PRKAR2AP13861 404 aaKnown RBP13.65□□□□□ -0.22
HNRNPC-215ENST00000555127 SLC4A1APQ9BWU0 796 aaKnown RBP13.61□□□□□ -0.23
HNRNPC-215ENST00000555127 C19orf67A6NJJ6 358 aa13.58□□□□□ -0.24
HNRNPC-215ENST00000555127 LHX8Q68G74 356 aa13.57□□□□□ -0.24
HNRNPC-215ENST00000555127 GABBR2O75899 941 aa13.56□□□□□ -0.24
HNRNPC-215ENST00000555127 CLEC11AQ9Y240 323 aa13.56□□□□□ -0.24
HNRNPC-215ENST00000555127 SPDYE2BA6NHP3 402 aa13.54□□□□□ -0.24
HNRNPC-215ENST00000555127 SPDYE6P0CI01 402 aa13.54□□□□□ -0.24
HNRNPC-215ENST00000555127 SPDYE2Q495Y8 402 aa13.54□□□□□ -0.24
HNRNPC-215ENST00000555127 ZBTB22O15209 634 aa13.49□□□□□ -0.25
HNRNPC-215ENST00000555127 SPDYE1Q8NFV5 336 aaPredicted RBP13.45□□□□□ -0.26
HNRNPC-215ENST00000555127 CHADLQ6NUI6 762 aa13.44□□□□□ -0.26
HNRNPC-215ENST00000555127 ZCCHC6Q5VYS8 1495 aaKnown RBP13.43□□□□□ -0.26
HNRNPC-215ENST00000555127 FBLN2P98095 1184 aa13.39□□□□□ -0.27
HNRNPC-215ENST00000555127 MKRN4PQ13434 485 aaPredicted RBP13.39□□□□□ -0.27
HNRNPC-215ENST00000555127 POTEIP0CG38 1075 aa13.34□□□□□ -0.27
HNRNPC-215ENST00000555127 ZNF692Q9BU19 519 aaPredicted RBP13.33□□□□□ -0.28
HNRNPC-215ENST00000555127 SSUH2Q9Y2M2 353 aa13.33□□□□□ -0.28
HNRNPC-215ENST00000555127 DCAF8L2P0C7V8 631 aa13.3□□□□□ -0.28
HNRNPC-215ENST00000555127 ATXN8OSP0DMR3 200 aa13.3□□□□□ -0.28
HNRNPC-215ENST00000555127 NACADO15069 1562 aa13.28□□□□□ -0.28
HNRNPC-215ENST00000555127 PLSCR2Q9NRY7 297 aa13.27□□□□□ -0.29
HNRNPC-215ENST00000555127 MYO15BQ96JP2 1530 aa13.27□□□□□ -0.29
HNRNPC-215ENST00000555127 DCAF1Q9Y4B6 1507 aa13.26□□□□□ -0.29
HNRNPC-215ENST00000555127 RB1CC1Q8TDY2 1594 aa13.25□□□□□ -0.29
HNRNPC-215ENST00000555127 PRR29P0C7W0 189 aa13.2□□□□□ -0.3
HNRNPC-215ENST00000555127 CD44P16070 742 aaKnown RBP13.16□□□□□ -0.3
HNRNPC-215ENST00000555127 PABPN1Q86U42 306 aaKnown RBP eCLIP13.14□□□□□ -0.31
HNRNPC-215ENST00000555127 FARP1Q9Y4F1 1045 aaPredicted RBP13.08□□□□□ -0.32
HNRNPC-215ENST00000555127 BICRAQ9NZM4 1560 aa13.03□□□□□ -0.32
HNRNPC-215ENST00000555127 DCBLD2Q96PD2 775 aa13.01□□□□□ -0.33
HNRNPC-215ENST00000555127 UNC13AQ9UPW8 1703 aa12.99□□□□□ -0.33
HNRNPC-215ENST00000555127 SCRIBQ14160 1630 aa12.98□□□□□ -0.33
HNRNPC-215ENST00000555127 OTUD5Q96G74 571 aa12.93□□□□□ -0.34
HNRNPC-215ENST00000555127 POTEB2H3BUK9 544 aa12.91□□□□□ -0.34
HNRNPC-215ENST00000555127 CLCN6P51797 869 aa12.91□□□□□ -0.34
HNRNPC-215ENST00000555127 ZNF579Q8NAF0 562 aaKnown RBP12.89□□□□□ -0.35
HNRNPC-215ENST00000555127 ZRANB1Q9UGI0 708 aa12.89□□□□□ -0.35
HNRNPC-215ENST00000555127 GALR2O43603 387 aaPredicted RBP12.88□□□□□ -0.35
HNRNPC-215ENST00000555127 POTEMA6NI47 508 aa12.81□□□□□ -0.36
HNRNPC-215ENST00000555127 SHROOM4Q9ULL8 1493 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms