RNA–Protein interactions for RNA: ENST00000533062.5

CHORDC1-208, Transcript of cysteine and histidine rich domain containing 1, humanhuman

TSL 4

Gene CHORDC1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHORDC1-208ENST00000533062 NISCHQ9Y2I1 1504 aa28.01■■■□□ 2.07
CHORDC1-208ENST00000533062 CCDC180Q9P1Z9 1646 aa24.86■■□□□ 1.57
CHORDC1-208ENST00000533062 ABCC9O60706 1549 aa24.61■■□□□ 1.53
CHORDC1-208ENST00000533062 DCAF8L2P0C7V8 631 aa23.62■■□□□ 1.37
CHORDC1-208ENST00000533062 RB1CC1Q8TDY2 1594 aa23.51■■□□□ 1.35
CHORDC1-208ENST00000533062 NACADO15069 1562 aa23.44■■□□□ 1.34
CHORDC1-208ENST00000533062 ZCCHC6Q5VYS8 1495 aaKnown RBP23.3■■□□□ 1.32
CHORDC1-208ENST00000533062 MYO15BQ96JP2 1530 aa23.2■■□□□ 1.3
CHORDC1-208ENST00000533062 DCAF1Q9Y4B6 1507 aa23.09■■□□□ 1.29
CHORDC1-208ENST00000533062 PABPN1Q86U42 306 aaKnown RBP eCLIP23.04■■□□□ 1.28
CHORDC1-208ENST00000533062 UNC13AQ9UPW8 1703 aa22.97■■□□□ 1.27
CHORDC1-208ENST00000533062 BICRAQ9NZM4 1560 aa22.84■■□□□ 1.25
CHORDC1-208ENST00000533062 SCRIBQ14160 1630 aa22.81■■□□□ 1.24
CHORDC1-208ENST00000533062 DNAJC5BQ9UF47 199 aa22.75■■□□□ 1.23
CHORDC1-208ENST00000533062 SHROOM4Q9ULL8 1493 aa22.47■■□□□ 1.19
CHORDC1-208ENST00000533062 EIF4G1Q04637 1599 aaKnown RBP22.25■■□□□ 1.15
CHORDC1-208ENST00000533062 CC2D2AQ9P2K1 1620 aa22.2■■□□□ 1.14
CHORDC1-208ENST00000533062 CECR2Q9BXF3 1484 aa22.09■■□□□ 1.13
CHORDC1-208ENST00000533062 SMARCA4P51532 1647 aa21.75■■□□□ 1.07
CHORDC1-208ENST00000533062 BAZ1AQ9NRL2 1556 aaPredicted RBP21.7■■□□□ 1.06
CHORDC1-208ENST00000533062 ATAD2BQ9ULI0 1458 aa21.69■■□□□ 1.06
CHORDC1-208ENST00000533062 NCAPD3P42695 1498 aa21.65■■□□□ 1.06
CHORDC1-208ENST00000533062 MROH2BQ7Z745 1585 aa21.63■■□□□ 1.05
CHORDC1-208ENST00000533062 SMARCA2P51531 1590 aa21.6■■□□□ 1.05
CHORDC1-208ENST00000533062 HMGXB3Q12766 1538 aa21.51■■□□□ 1.03
CHORDC1-208ENST00000533062 BAZ1BQ9UIG0 1483 aaKnown RBP21.5■■□□□ 1.03
CHORDC1-208ENST00000533062 PEG3Q9GZU2 1588 aa21.49■■□□□ 1.03
CHORDC1-208ENST00000533062 WIZO95785 1651 aa21.39■■□□□ 1.01
CHORDC1-208ENST00000533062 RSF1Q96T23 1441 aaPredicted RBP21.34■■□□□ 1.01
CHORDC1-208ENST00000533062 NESP48681 1621 aa21.27■■□□□ 1
CHORDC1-208ENST00000533062 ERCC6Q03468 1493 aa21.19■□□□□ 0.98
CHORDC1-208ENST00000533062 TOP2AP11388 1531 aaKnown RBP21.1■□□□□ 0.97
CHORDC1-208ENST00000533062 LAMC3Q9Y6N6 1575 aa21.08■□□□□ 0.97
CHORDC1-208ENST00000533062 CADPSQ9ULU8 1353 aa21.06■□□□□ 0.96
CHORDC1-208ENST00000533062 PDS5BQ9NTI5 1447 aa20.98■□□□□ 0.95
CHORDC1-208ENST00000533062 KIF21AQ7Z4S6 1674 aa20.94■□□□□ 0.94
CHORDC1-208ENST00000533062 CUX2O14529 1486 aa20.93■□□□□ 0.94
CHORDC1-208ENST00000533062 CCDC88BA6NC98 1476 aa20.91■□□□□ 0.94
CHORDC1-208ENST00000533062 CFTRP13569 1480 aa20.88■□□□□ 0.93
CHORDC1-208ENST00000533062 THOC2Q8NI27 1593 aaKnown RBP20.88■□□□□ 0.93
CHORDC1-208ENST00000533062 SUPT5HO00267 1087 aaKnown RBP20.83■□□□□ 0.93
CHORDC1-208ENST00000533062 FANCD2Q9BXW9 1451 aa20.82■□□□□ 0.92
CHORDC1-208ENST00000533062 CEP164Q9UPV0 1460 aa20.79■□□□□ 0.92
CHORDC1-208ENST00000533062 MRC2Q9UBG0 1479 aa20.78■□□□□ 0.92
CHORDC1-208ENST00000533062 WDR62O43379 1518 aa20.69■□□□□ 0.9
CHORDC1-208ENST00000533062 URB2Q14146 1524 aaKnown RBP20.63■□□□□ 0.89
CHORDC1-208ENST00000533062 PRDM2Q13029 1718 aa20.62■□□□□ 0.89
CHORDC1-208ENST00000533062 DNAJC5Q9H3Z4 198 aa20.5■□□□□ 0.87
CHORDC1-208ENST00000533062 TOPBP1Q92547 1522 aa20.47■□□□□ 0.87
CHORDC1-208ENST00000533062 DNMBPQ6XZF7 1577 aa20.4■□□□□ 0.86
CHORDC1-208ENST00000533062 ABCC8Q09428 1581 aa20.38■□□□□ 0.85
CHORDC1-208ENST00000533062 IFT140Q96RY7 1462 aa20.34■□□□□ 0.85
CHORDC1-208ENST00000533062 ZNF608Q9ULD9 1512 aaPredicted RBP20.33■□□□□ 0.85
CHORDC1-208ENST00000533062 POLA1P09884 1462 aaPredicted RBP20.3■□□□□ 0.84
CHORDC1-208ENST00000533062 CUX1P39880 1505 aa20.28■□□□□ 0.84
CHORDC1-208ENST00000533062 RAD54L2Q9Y4B4 1467 aa20.26■□□□□ 0.83
CHORDC1-208ENST00000533062 FGD5Q6ZNL6 1462 aa20.24■□□□□ 0.83
CHORDC1-208ENST00000533062 TARBP1Q13395 1621 aaKnown RBP20.24■□□□□ 0.83
CHORDC1-208ENST00000533062 SOGA1O94964 1423 aa20.23■□□□□ 0.83
CHORDC1-208ENST00000533062 AQRO60306 1485 aaKnown RBP eCLIP20.22■□□□□ 0.837e-7■■□□□ 13.9
CHORDC1-208ENST00000533062 EIF4G3O43432 1585 aaKnown RBP20.19■□□□□ 0.82
CHORDC1-208ENST00000533062 TDRD9Q8NDG6 1382 aaKnown RBP20.17■□□□□ 0.82
CHORDC1-208ENST00000533062 OSCARQ8IYS5 282 aa20.12■□□□□ 0.81
CHORDC1-208ENST00000533062 WRNQ14191 1432 aaPredicted RBP eCLIP20.1■□□□□ 0.81
CHORDC1-208ENST00000533062 SYNJ1O43426 1573 aa20.08■□□□□ 0.8
CHORDC1-208ENST00000533062 FBLN2P98095 1184 aa20.04■□□□□ 0.8
CHORDC1-208ENST00000533062 TOP2BQ02880 1626 aa20.04■□□□□ 0.8
CHORDC1-208ENST00000533062 BIVM-ERCC5R4GMW8 1640 aa20.02■□□□□ 0.79
CHORDC1-208ENST00000533062 WDR97A6NE52 1622 aa20■□□□□ 0.79
CHORDC1-208ENST00000533062 ABCA10Q8WWZ4 1543 aa19.99■□□□□ 0.79
CHORDC1-208ENST00000533062 SNAPC4Q5SXM2 1469 aa19.99■□□□□ 0.79
CHORDC1-208ENST00000533062 GRIN2BQ13224 1484 aa19.97■□□□□ 0.79
CHORDC1-208ENST00000533062 GAPVD1Q14C86 1478 aa19.97■□□□□ 0.79
CHORDC1-208ENST00000533062 CHD1O14646 1710 aa19.94■□□□□ 0.78
CHORDC1-208ENST00000533062 CHMP7Q8WUX9 453 aaPredicted RBP19.92■□□□□ 0.78
CHORDC1-208ENST00000533062 ABCA5Q8WWZ7 1642 aa19.91■□□□□ 0.78
CHORDC1-208ENST00000533062 PBRM1Q86U86 1689 aa19.89■□□□□ 0.77
CHORDC1-208ENST00000533062 MAGI1Q96QZ7 1491 aaPredicted RBP19.89■□□□□ 0.77
CHORDC1-208ENST00000533062 TRIM41Q8WV44 630 aa19.88■□□□□ 0.77
CHORDC1-208ENST00000533062 SYNJ2O15056 1496 aa19.85■□□□□ 0.77
CHORDC1-208ENST00000533062 RIMBP3CA6NJZ7 1639 aa19.78■□□□□ 0.76
CHORDC1-208ENST00000533062 RIMBP3BA6NNM3 1639 aa19.78■□□□□ 0.76
CHORDC1-208ENST00000533062 RIMBP3Q9UFD9 1639 aa19.78■□□□□ 0.76
CHORDC1-208ENST00000533062 ARHGEF11O15085 1522 aa19.77■□□□□ 0.76
CHORDC1-208ENST00000533062 ADAMTS12P58397 1594 aa19.74■□□□□ 0.75
CHORDC1-208ENST00000533062 ERICH3Q5RHP9 1530 aa19.74■□□□□ 0.75
CHORDC1-208ENST00000533062 CLASP1Q7Z460 1538 aa19.72■□□□□ 0.75
CHORDC1-208ENST00000533062 FHAD1B1AJZ9 1412 aa19.72■□□□□ 0.75
CHORDC1-208ENST00000533062 GRIN2AQ12879 1464 aa19.72■□□□□ 0.75
CHORDC1-208ENST00000533062 KIF27Q86VH2 1401 aa19.68■□□□□ 0.74
CHORDC1-208ENST00000533062 CYB5RLQ6IPT4 315 aa19.68■□□□□ 0.74
CHORDC1-208ENST00000533062 IGF1RP08069 1367 aa19.66■□□□□ 0.74
CHORDC1-208ENST00000533062 CEP170Q5SW79 1584 aa19.63■□□□□ 0.73
CHORDC1-208ENST00000533062 ARAP1Q96P48 1450 aa19.62■□□□□ 0.73
CHORDC1-208ENST00000533062 NUP160Q12769 1436 aa19.62■□□□□ 0.73
CHORDC1-208ENST00000533062 RUSC2Q8N2Y8 1516 aa19.56■□□□□ 0.72
CHORDC1-208ENST00000533062 CARMIL1Q5VZK9 1371 aa19.53■□□□□ 0.72
CHORDC1-208ENST00000533062 ERCC6L2Q5T890 1561 aa19.53■□□□□ 0.72
CHORDC1-208ENST00000533062 CUL7Q14999 1698 aa19.52■□□□□ 0.71
CHORDC1-208ENST00000533062 JPH4Q96JJ6 628 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 266.8 ms