RNA–Protein interactions for RNA: ENST00000578593.1

DDX42-207, Transcript of DEAD-box helicase 42, humanhuman

TSL 2

Gene DDX42, Length 2,919 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-207ENST00000578593 NISCHQ9Y2I1 1504 aa13.72□□□□□ -0.21
DDX42-207ENST00000578593 PELP1Q8IZL8 1130 aaKnown RBP13.62□□□□□ -0.23
DDX42-207ENST00000578593 MYT1Q01538 1121 aa13.44□□□□□ -0.26
DDX42-207ENST00000578593 TTBK1Q5TCY1 1321 aaPredicted RBP12.99□□□□□ -0.33
DDX42-207ENST00000578593 PRKCSHP14314 528 aaPredicted RBP12.82□□□□□ -0.36
DDX42-207ENST00000578593 SLC24A1O60721 1099 aa12.59□□□□□ -0.39
DDX42-207ENST00000578593 APLP2Q06481 763 aa12.53□□□□□ -0.4
DDX42-207ENST00000578593 ERICH6Q7L0X2 663 aa12.48□□□□□ -0.41
DDX42-207ENST00000578593 HRCP23327 699 aa12.39□□□□□ -0.43
DDX42-207ENST00000578593 BCL11AQ9H165 835 aa12.38□□□□□ -0.43
DDX42-207ENST00000578593 SCAF1Q9H7N4 1312 aaKnown RBP12.32□□□□□ -0.44
DDX42-207ENST00000578593 FAM9AQ8IZU1 332 aaPredicted RBP12.24□□□□□ -0.45
DDX42-207ENST00000578593 PPARGC1BQ86YN6 1023 aaKnown RBP12.04□□□□□ -0.48
DDX42-207ENST00000578593 DAXXQ9UER7 740 aaPredicted RBP12.03□□□□□ -0.48
DDX42-207ENST00000578593 PCGF6Q9BYE7 350 aa11.98□□□□□ -0.49
DDX42-207ENST00000578593 SHROOM4Q9ULL8 1493 aa11.97□□□□□ -0.49
DDX42-207ENST00000578593 SUPT5HO00267 1087 aaKnown RBP11.95□□□□□ -0.5
DDX42-207ENST00000578593 MYO15BQ96JP2 1530 aa11.92□□□□□ -0.5
DDX42-207ENST00000578593 CENPBP07199 599 aaPredicted RBP11.87□□□□□ -0.51
DDX42-207ENST00000578593 ABCC9O60706 1549 aa11.81□□□□□ -0.52
DDX42-207ENST00000578593 CHIC1Q5VXU3 224 aa11.79□□□□□ -0.52
DDX42-207ENST00000578593 EIF5BO60841 1220 aaKnown RBP11.78□□□□□ -0.52
DDX42-207ENST00000578593 ZCCHC6Q5VYS8 1495 aaKnown RBP11.69□□□□□ -0.54
DDX42-207ENST00000578593 ACIN1Q9UKV3 1341 aaKnown RBP11.68□□□□□ -0.54
DDX42-207ENST00000578593 DCAF1Q9Y4B6 1507 aa11.66□□□□□ -0.54
DDX42-207ENST00000578593 ANP32EQ9BTT0 268 aa11.64□□□□□ -0.55
DDX42-207ENST00000578593 GTF3C3Q9Y5Q9 886 aa11.61□□□□□ -0.55
DDX42-207ENST00000578593 NEUROD1Q13562 356 aa11.58□□□□□ -0.56
DDX42-207ENST00000578593 CCDC180Q9P1Z9 1646 aa11.57□□□□□ -0.56
DDX42-207ENST00000578593 PLEKHG5O94827 1062 aa11.57□□□□□ -0.56
DDX42-207ENST00000578593 TRIM26Q12899 539 aaPredicted RBP11.56□□□□□ -0.56
DDX42-207ENST00000578593 CSRNP3Q8WYN3 585 aa11.54□□□□□ -0.56
DDX42-207ENST00000578593 LOC105371045A0A1W2PR82 267 aa11.53□□□□□ -0.56
DDX42-207ENST00000578593 UBE2Q2Q8WVN8 375 aa11.51□□□□□ -0.57
DDX42-207ENST00000578593 ANO8Q9HCE9 1232 aaPredicted RBP11.47□□□□□ -0.57
DDX42-207ENST00000578593 ZEB1P37275 1124 aaPredicted RBP11.47□□□□□ -0.57
DDX42-207ENST00000578593 PODXL2Q9NZ53 605 aa11.35□□□□□ -0.59
DDX42-207ENST00000578593 DNAJC5BQ9UF47 199 aa11.3□□□□□ -0.6
DDX42-207ENST00000578593 PKNOX2Q96KN3 472 aa11.25□□□□□ -0.61
DDX42-207ENST00000578593 SALL2Q9Y467 1007 aaPredicted RBP11.18□□□□□ -0.62
DDX42-207ENST00000578593 DCAF8L2P0C7V8 631 aa11.15□□□□□ -0.62
DDX42-207ENST00000578593 CCDC136Q96JN2 1154 aa11.12□□□□□ -0.63
DDX42-207ENST00000578593 DIEXFQ68CQ4 756 aaKnown RBP11.1□□□□□ -0.63
DDX42-207ENST00000578593 NCBP3Q53F19 620 aaKnown RBP11.1□□□□□ -0.63
DDX42-207ENST00000578593 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.08□□□□□ -0.64
DDX42-207ENST00000578593 TSHZ2Q9NRE2 1034 aa11.07□□□□□ -0.64
DDX42-207ENST00000578593 CCER1Q8TC90 406 aaPredicted RBP11.05□□□□□ -0.64
DDX42-207ENST00000578593 RB1CC1Q8TDY2 1594 aa11.03□□□□□ -0.64
DDX42-207ENST00000578593 TRIM41Q8WV44 630 aa11.02□□□□□ -0.64
DDX42-207ENST00000578593 ERICH6BQ5W0A0 696 aa11.02□□□□□ -0.65
DDX42-207ENST00000578593 KLHL34Q8N239 644 aa11.02□□□□□ -0.65
DDX42-207ENST00000578593 EHMT2Q96KQ7 1210 aa11.02□□□□□ -0.65
DDX42-207ENST00000578593 PABPN1Q86U42 306 aaKnown RBP eCLIP11□□□□□ -0.651e-6■■□□□ 14.2
DDX42-207ENST00000578593 RSF1Q96T23 1441 aaPredicted RBP10.96□□□□□ -0.65
DDX42-207ENST00000578593 YTHDC1Q96MU7 727 aaKnown RBP10.95□□□□□ -0.66
DDX42-207ENST00000578593 NEFLP07196 543 aa10.94□□□□□ -0.66
DDX42-207ENST00000578593 PDIA4P13667 645 aaKnown RBP10.93□□□□□ -0.66
DDX42-207ENST00000578593 ARXQ96QS3 562 aa10.92□□□□□ -0.66
DDX42-207ENST00000578593 PDE4CQ08493 712 aa10.91□□□□□ -0.66
DDX42-207ENST00000578593 SCRIBQ14160 1630 aa10.91□□□□□ -0.66
DDX42-207ENST00000578593 AEBP2Q6ZN18 517 aaPredicted RBP10.91□□□□□ -0.66
DDX42-207ENST00000578593 RANGAP1P46060 587 aaPredicted RBP10.9□□□□□ -0.66
DDX42-207ENST00000578593 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.89□□□□□ -0.67
DDX42-207ENST00000578593 NACADO15069 1562 aa10.88□□□□□ -0.67
DDX42-207ENST00000578593 MYT1LQ9UL68 1186 aa10.88□□□□□ -0.67
DDX42-207ENST00000578593 ZNF316A6NFI3 1004 aaPredicted RBP10.85□□□□□ -0.67
DDX42-207ENST00000578593 DEKP35659 375 aaKnown RBP10.84□□□□□ -0.67
DDX42-207ENST00000578593 CLSPNQ9HAW4 1339 aa10.84□□□□□ -0.67
DDX42-207ENST00000578593 UNC13AQ9UPW8 1703 aa10.84□□□□□ -0.67
DDX42-207ENST00000578593 FGD1P98174 961 aa10.82□□□□□ -0.68
DDX42-207ENST00000578593 MIER1Q8N108 512 aa10.81□□□□□ -0.68
DDX42-207ENST00000578593 SUPT16HQ9Y5B9 1047 aaKnown RBP10.81□□□□□ -0.68
DDX42-207ENST00000578593 TIMELESSQ9UNS1 1208 aa10.79□□□□□ -0.68
DDX42-207ENST00000578593 EIF4G1Q04637 1599 aaKnown RBP10.77□□□□□ -0.69
DDX42-207ENST00000578593 BCL11BQ9C0K0 894 aaPredicted RBP10.77□□□□□ -0.69
DDX42-207ENST00000578593 BICRAQ9NZM4 1560 aa10.77□□□□□ -0.69
DDX42-207ENST00000578593 CECR2Q9BXF3 1484 aa10.74□□□□□ -0.69
DDX42-207ENST00000578593 MROH2BQ7Z745 1585 aa10.73□□□□□ -0.69
DDX42-207ENST00000578593 MSH5O43196 834 aa10.73□□□□□ -0.69
DDX42-207ENST00000578593 WIZO95785 1651 aa10.73□□□□□ -0.69
DDX42-207ENST00000578593 A0A0U1RQG5 324 aaPredicted RBP10.72□□□□□ -0.69
DDX42-207ENST00000578593 ZMYND15Q9H091 742 aa10.72□□□□□ -0.69
DDX42-207ENST00000578593 PLPPR3Q6T4P5 718 aa10.71□□□□□ -0.69
DDX42-207ENST00000578593 AAMPQ13685 434 aa10.71□□□□□ -0.7
DDX42-207ENST00000578593 RBM19Q9Y4C8 960 aaKnown RBP10.69□□□□□ -0.7
DDX42-207ENST00000578593 RTN4Q9NQC3 1192 aaKnown RBP10.68□□□□□ -0.7
DDX42-207ENST00000578593 WRNQ14191 1432 aaPredicted RBP eCLIP10.67□□□□□ -0.7
DDX42-207ENST00000578593 TAF7LQ5H9L4 462 aa10.66□□□□□ -0.7
DDX42-207ENST00000578593 IL27Q8NEV9 243 aa10.66□□□□□ -0.7
DDX42-207ENST00000578593 RBM10P98175 930 aaKnown RBP10.65□□□□□ -0.7
DDX42-207ENST00000578593 GLIPR1L2Q4G1C9 344 aa10.64□□□□□ -0.71
DDX42-207ENST00000578593 BAZ1AQ9NRL2 1556 aaPredicted RBP10.64□□□□□ -0.71
DDX42-207ENST00000578593 CEP162Q5TB80 1403 aa10.61□□□□□ -0.71
DDX42-207ENST00000578593 CC2D2AQ9P2K1 1620 aa10.6□□□□□ -0.71
DDX42-207ENST00000578593 VSIG10Q8N0Z9 540 aa10.6□□□□□ -0.71
DDX42-207ENST00000578593 ABCC8Q09428 1581 aa10.57□□□□□ -0.72
DDX42-207ENST00000578593 RSPH6AQ9H0K4 717 aa10.55□□□□□ -0.72
DDX42-207ENST00000578593 HNRNPUL2Q1KMD3 747 aaKnown RBP10.55□□□□□ -0.72
DDX42-207ENST00000578593 CCDC88BA6NC98 1476 aa10.54□□□□□ -0.72
DDX42-207ENST00000578593 FANCIQ9NVI1 1328 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 106.5 ms