RNA–Protein interactions for RNA: ENST00000534227.5

NCAPD3-211, Transcript of non-SMC condensin II complex subunit D3, humanhuman

APPRIS ALT2 TSL 4

Gene NCAPD3, Length 537 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3-211ENST00000534227 NISCHQ9Y2I1 1504 aa54.22■■■■■ 6.27
NCAPD3-211ENST00000534227 CCDC180Q9P1Z9 1646 aa48.32■■■■■ 5.33
NCAPD3-211ENST00000534227 ABCC9O60706 1549 aa47.11■■■■■ 5.13
NCAPD3-211ENST00000534227 RB1CC1Q8TDY2 1594 aa45.41■■■■■ 4.86
NCAPD3-211ENST00000534227 NACADO15069 1562 aa45.37■■■■■ 4.85
NCAPD3-211ENST00000534227 ZCCHC6Q5VYS8 1495 aaKnown RBP45.17■■■■■ 4.82
NCAPD3-211ENST00000534227 DCAF8L2P0C7V8 631 aa45.14■■■■■ 4.82
NCAPD3-211ENST00000534227 MYO15BQ96JP2 1530 aa45.13■■■■■ 4.82
NCAPD3-211ENST00000534227 DCAF1Q9Y4B6 1507 aa44.92■■■■■ 4.78
NCAPD3-211ENST00000534227 UNC13AQ9UPW8 1703 aa44.5■■■■■ 4.71
NCAPD3-211ENST00000534227 BICRAQ9NZM4 1560 aa44.05■■■■■ 4.64
NCAPD3-211ENST00000534227 PABPN1Q86U42 306 aaKnown RBP eCLIP43.97■■■■■ 4.63
NCAPD3-211ENST00000534227 SCRIBQ14160 1630 aa43.95■■■■■ 4.63
NCAPD3-211ENST00000534227 SHROOM4Q9ULL8 1493 aa43.63■■■■■ 4.57
NCAPD3-211ENST00000534227 DNAJC5BQ9UF47 199 aa43.56■■■■■ 4.56
NCAPD3-211ENST00000534227 EIF4G1Q04637 1599 aaKnown RBP42.86■■■■■ 4.45
NCAPD3-211ENST00000534227 CC2D2AQ9P2K1 1620 aa42.7■■■■■ 4.43
NCAPD3-211ENST00000534227 CECR2Q9BXF3 1484 aa42.36■■■■■ 4.37
NCAPD3-211ENST00000534227 SMARCA4P51532 1647 aa42.1■■■■■ 4.33
NCAPD3-211ENST00000534227 BAZ1AQ9NRL2 1556 aaPredicted RBP42.04■■■■■ 4.32
NCAPD3-211ENST00000534227 NCAPD3P42695 1498 aa41.84■■■■■ 4.29
NCAPD3-211ENST00000534227 ATAD2BQ9ULI0 1458 aa41.83■■■■■ 4.29
NCAPD3-211ENST00000534227 SMARCA2P51531 1590 aa41.83■■■■■ 4.29
NCAPD3-211ENST00000534227 MROH2BQ7Z745 1585 aa41.76■■■■■ 4.27
NCAPD3-211ENST00000534227 PEG3Q9GZU2 1588 aa41.72■■■■■ 4.27
NCAPD3-211ENST00000534227 HMGXB3Q12766 1538 aa41.66■■■■■ 4.26
NCAPD3-211ENST00000534227 BAZ1BQ9UIG0 1483 aaKnown RBP41.47■■■■■ 4.23
NCAPD3-211ENST00000534227 WIZO95785 1651 aa41.34■■■■■ 4.21
NCAPD3-211ENST00000534227 RSF1Q96T23 1441 aaPredicted RBP41.26■■■■■ 4.19
NCAPD3-211ENST00000534227 TOP2AP11388 1531 aaKnown RBP40.9■■■■■ 4.14
NCAPD3-211ENST00000534227 NESP48681 1621 aa40.78■■■■■ 4.12
NCAPD3-211ENST00000534227 LAMC3Q9Y6N6 1575 aa40.77■■■■■ 4.12
NCAPD3-211ENST00000534227 ERCC6Q03468 1493 aa40.62■■■■■ 4.09
NCAPD3-211ENST00000534227 CADPSQ9ULU8 1353 aa40.59■■■■■ 4.09
NCAPD3-211ENST00000534227 PDS5BQ9NTI5 1447 aa40.44■■■■■ 4.06
NCAPD3-211ENST00000534227 KIF21AQ7Z4S6 1674 aa40.4■■■■■ 4.06
NCAPD3-211ENST00000534227 CCDC88BA6NC98 1476 aa40.39■■■■■ 4.06
NCAPD3-211ENST00000534227 CFTRP13569 1480 aa40.36■■■■■ 4.05
NCAPD3-211ENST00000534227 CUX2O14529 1486 aa40.26■■■■■ 4.04
NCAPD3-211ENST00000534227 THOC2Q8NI27 1593 aaKnown RBP40.25■■■■■ 4.03
NCAPD3-211ENST00000534227 PRDM2Q13029 1718 aa40.22■■■■■ 4.03
NCAPD3-211ENST00000534227 FANCD2Q9BXW9 1451 aa40.11■■■■■ 4.01
NCAPD3-211ENST00000534227 SUPT5HO00267 1087 aaKnown RBP40.1■■■■■ 4.01
NCAPD3-211ENST00000534227 CEP164Q9UPV0 1460 aa40.07■■■■■ 4.01
NCAPD3-211ENST00000534227 MRC2Q9UBG0 1479 aa40.02■■■■■ 4
NCAPD3-211ENST00000534227 WDR62O43379 1518 aa39.93■■■■□ 3.98
NCAPD3-211ENST00000534227 URB2Q14146 1524 aaKnown RBP39.72■■■■□ 3.95
NCAPD3-211ENST00000534227 ABCC8Q09428 1581 aa39.53■■■■□ 3.92
NCAPD3-211ENST00000534227 TOPBP1Q92547 1522 aa39.49■■■■□ 3.91
NCAPD3-211ENST00000534227 DNMBPQ6XZF7 1577 aa39.47■■■■□ 3.91
NCAPD3-211ENST00000534227 DNAJC5Q9H3Z4 198 aa39.46■■■■□ 3.91
NCAPD3-211ENST00000534227 IFT140Q96RY7 1462 aa39.24■■■■□ 3.87
NCAPD3-211ENST00000534227 CUX1P39880 1505 aa39.18■■■■□ 3.86
NCAPD3-211ENST00000534227 POLA1P09884 1462 aaPredicted RBP39.14■■■■□ 3.86
NCAPD3-211ENST00000534227 TARBP1Q13395 1621 aaKnown RBP39.11■■■■□ 3.85
NCAPD3-211ENST00000534227 FGD5Q6ZNL6 1462 aa39.04■■■■□ 3.84
NCAPD3-211ENST00000534227 ZNF608Q9ULD9 1512 aaPredicted RBP39.03■■■■□ 3.84
NCAPD3-211ENST00000534227 SOGA1O94964 1423 aa38.97■■■■□ 3.83
NCAPD3-211ENST00000534227 RAD54L2Q9Y4B4 1467 aa38.94■■■■□ 3.82
NCAPD3-211ENST00000534227 EIF4G3O43432 1585 aaKnown RBP38.94■■■■□ 3.82
NCAPD3-211ENST00000534227 BIVM-ERCC5R4GMW8 1640 aa38.92■■■■□ 3.82
NCAPD3-211ENST00000534227 WRNQ14191 1432 aaPredicted RBP eCLIP38.9■■■■□ 3.82
NCAPD3-211ENST00000534227 TOP2BQ02880 1626 aa38.89■■■■□ 3.82
NCAPD3-211ENST00000534227 WDR97A6NE52 1622 aa38.85■■■■□ 3.81
NCAPD3-211ENST00000534227 SYNJ1O43426 1573 aa38.84■■■■□ 3.81
NCAPD3-211ENST00000534227 AQRO60306 1485 aaKnown RBP eCLIP38.8■■■■□ 3.8
NCAPD3-211ENST00000534227 TDRD9Q8NDG6 1382 aaKnown RBP38.7■■■■□ 3.79
NCAPD3-211ENST00000534227 ABCA10Q8WWZ4 1543 aa38.69■■■■□ 3.78
NCAPD3-211ENST00000534227 ABCA5Q8WWZ7 1642 aa38.57■■■■□ 3.77
NCAPD3-211ENST00000534227 PBRM1Q86U86 1689 aa38.55■■■■□ 3.76
NCAPD3-211ENST00000534227 OSCARQ8IYS5 282 aa38.54■■■■□ 3.76
NCAPD3-211ENST00000534227 GRIN2BQ13224 1484 aa38.54■■■■□ 3.76
NCAPD3-211ENST00000534227 GAPVD1Q14C86 1478 aa38.54■■■■□ 3.76
NCAPD3-211ENST00000534227 CHD1O14646 1710 aa38.51■■■■□ 3.76
NCAPD3-211ENST00000534227 SNAPC4Q5SXM2 1469 aa38.46■■■■□ 3.75
NCAPD3-211ENST00000534227 MAGI1Q96QZ7 1491 aaPredicted RBP38.46■■■■□ 3.75
NCAPD3-211ENST00000534227 SYNJ2O15056 1496 aa38.29■■■■□ 3.72
NCAPD3-211ENST00000534227 FBLN2P98095 1184 aa38.27■■■■□ 3.72
NCAPD3-211ENST00000534227 ERICH3Q5RHP9 1530 aa38.25■■■■□ 3.71
NCAPD3-211ENST00000534227 CHMP7Q8WUX9 453 aaPredicted RBP38.22■■■■□ 3.71
NCAPD3-211ENST00000534227 ADAMTS12P58397 1594 aa38.19■■■■□ 3.7
NCAPD3-211ENST00000534227 KIF27Q86VH2 1401 aa38.11■■■■□ 3.69
NCAPD3-211ENST00000534227 FHAD1B1AJZ9 1412 aa38.09■■■■□ 3.69
NCAPD3-211ENST00000534227 GRIN2AQ12879 1464 aa38.04■■■■□ 3.68
NCAPD3-211ENST00000534227 CLASP1Q7Z460 1538 aa38.04■■■■□ 3.68
NCAPD3-211ENST00000534227 TRIM41Q8WV44 630 aa38■■■■□ 3.67
NCAPD3-211ENST00000534227 RIMBP3CA6NJZ7 1639 aa37.98■■■■□ 3.67
NCAPD3-211ENST00000534227 RIMBP3BA6NNM3 1639 aa37.98■■■■□ 3.67
NCAPD3-211ENST00000534227 RIMBP3Q9UFD9 1639 aa37.98■■■■□ 3.67
NCAPD3-211ENST00000534227 ARHGEF11O15085 1522 aa37.94■■■■□ 3.66
NCAPD3-211ENST00000534227 IGF1RP08069 1367 aa37.93■■■■□ 3.66
NCAPD3-211ENST00000534227 CUL7Q14999 1698 aa37.93■■■■□ 3.66
NCAPD3-211ENST00000534227 NUP160Q12769 1436 aa37.88■■■■□ 3.66
NCAPD3-211ENST00000534227 CEP170Q5SW79 1584 aa37.86■■■■□ 3.65
NCAPD3-211ENST00000534227 RUSC2Q8N2Y8 1516 aa37.72■■■■□ 3.63
NCAPD3-211ENST00000534227 CARMIL1Q5VZK9 1371 aa37.71■■■■□ 3.63
NCAPD3-211ENST00000534227 SHROOM2Q13796 1616 aa37.66■■■■□ 3.62
NCAPD3-211ENST00000534227 ARAP1Q96P48 1450 aa37.63■■■■□ 3.61
NCAPD3-211ENST00000534227 KIAA0586Q9BVV6 1533 aa37.51■■■■□ 3.6
NCAPD3-211ENST00000534227 CYB5RLQ6IPT4 315 aa37.51■■■■□ 3.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms