RNA–Protein interactions for RNA: ENST00000525256.1

C11orf58-206, Transcript of chromosome 11 open reading frame 58, humanhuman

TSL 2

Gene C11orf58, Length 762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf58-206ENST00000525256 NISCHQ9Y2I1 1504 aa32.34■■■□□ 2.77
C11orf58-206ENST00000525256 ABCC9O60706 1549 aa29.36■■■□□ 2.29
C11orf58-206ENST00000525256 CCDC180Q9P1Z9 1646 aa29.19■■■□□ 2.26
C11orf58-206ENST00000525256 RB1CC1Q8TDY2 1594 aa27.85■■■□□ 2.05
C11orf58-206ENST00000525256 NACADO15069 1562 aa27.55■■■□□ 2
C11orf58-206ENST00000525256 DCAF8L2P0C7V8 631 aa27.53■■■□□ 2
C11orf58-206ENST00000525256 DNAJC5BQ9UF47 199 aa27.49■■□□□ 1.99
C11orf58-206ENST00000525256 UNC13AQ9UPW8 1703 aa27.36■■□□□ 1.97
C11orf58-206ENST00000525256 PABPN1Q86U42 306 aaKnown RBP eCLIP27.27■■□□□ 1.961e-5■□□□□ 8.6
C11orf58-206ENST00000525256 BICRAQ9NZM4 1560 aa26.98■■□□□ 1.91
C11orf58-206ENST00000525256 MYO15BQ96JP2 1530 aa26.97■■□□□ 1.91
C11orf58-206ENST00000525256 ZCCHC6Q5VYS8 1495 aaKnown RBP26.78■■□□□ 1.88
C11orf58-206ENST00000525256 SCRIBQ14160 1630 aa26.7■■□□□ 1.86
C11orf58-206ENST00000525256 DCAF1Q9Y4B6 1507 aa26.61■■□□□ 1.85
C11orf58-206ENST00000525256 SHROOM4Q9ULL8 1493 aa26.52■■□□□ 1.84
C11orf58-206ENST00000525256 CC2D2AQ9P2K1 1620 aa26.5■■□□□ 1.83
C11orf58-206ENST00000525256 CECR2Q9BXF3 1484 aa26.41■■□□□ 1.82
C11orf58-206ENST00000525256 EIF4G1Q04637 1599 aaKnown RBP26.37■■□□□ 1.81
C11orf58-206ENST00000525256 ERCC6Q03468 1493 aa25.41■■□□□ 1.66
C11orf58-206ENST00000525256 SMARCA4P51532 1647 aa25.35■■□□□ 1.65
C11orf58-206ENST00000525256 DNAJC5Q9H3Z4 198 aa25.34■■□□□ 1.65
C11orf58-206ENST00000525256 NCAPD3P42695 1498 aa25.34■■□□□ 1.65
C11orf58-206ENST00000525256 ATAD2BQ9ULI0 1458 aa25.3■■□□□ 1.64
C11orf58-206ENST00000525256 SMARCA2P51531 1590 aa25.3■■□□□ 1.64
C11orf58-206ENST00000525256 CUX2O14529 1486 aa25.28■■□□□ 1.64
C11orf58-206ENST00000525256 HMGXB3Q12766 1538 aa25.24■■□□□ 1.63
C11orf58-206ENST00000525256 BAZ1AQ9NRL2 1556 aaPredicted RBP25.17■■□□□ 1.62
C11orf58-206ENST00000525256 BAZ1BQ9UIG0 1483 aaKnown RBP25.16■■□□□ 1.62
C11orf58-206ENST00000525256 NESP48681 1621 aa25.16■■□□□ 1.62
C11orf58-206ENST00000525256 PEG3Q9GZU2 1588 aa24.97■■□□□ 1.59
C11orf58-206ENST00000525256 MROH2BQ7Z745 1585 aa24.96■■□□□ 1.59
C11orf58-206ENST00000525256 KIF21AQ7Z4S6 1674 aa24.95■■□□□ 1.58
C11orf58-206ENST00000525256 THOC2Q8NI27 1593 aaKnown RBP24.95■■□□□ 1.58
C11orf58-206ENST00000525256 LAMC3Q9Y6N6 1575 aa24.93■■□□□ 1.58
C11orf58-206ENST00000525256 WIZO95785 1651 aa24.75■■□□□ 1.55
C11orf58-206ENST00000525256 PDS5BQ9NTI5 1447 aa24.75■■□□□ 1.55
C11orf58-206ENST00000525256 CADPSQ9ULU8 1353 aa24.6■■□□□ 1.53
C11orf58-206ENST00000525256 MRC2Q9UBG0 1479 aa24.59■■□□□ 1.53
C11orf58-206ENST00000525256 WDR62O43379 1518 aa24.51■■□□□ 1.51
C11orf58-206ENST00000525256 CEP164Q9UPV0 1460 aa24.5■■□□□ 1.51
C11orf58-206ENST00000525256 FANCD2Q9BXW9 1451 aa24.42■■□□□ 1.5
C11orf58-206ENST00000525256 TRIM41Q8WV44 630 aa24.41■■□□□ 1.5
C11orf58-206ENST00000525256 TOP2AP11388 1531 aaKnown RBP24.35■■□□□ 1.49
C11orf58-206ENST00000525256 RSF1Q96T23 1441 aaPredicted RBP24.31■■□□□ 1.48
C11orf58-206ENST00000525256 PRDM2Q13029 1718 aa24.3■■□□□ 1.48
C11orf58-206ENST00000525256 CFTRP13569 1480 aa24.28■■□□□ 1.48
C11orf58-206ENST00000525256 URB2Q14146 1524 aaKnown RBP24.21■■□□□ 1.47
C11orf58-206ENST00000525256 OSCARQ8IYS5 282 aa24.07■■□□□ 1.44
C11orf58-206ENST00000525256 CCDC88BA6NC98 1476 aa24.03■■□□□ 1.44
C11orf58-206ENST00000525256 ZNF608Q9ULD9 1512 aaPredicted RBP23.95■■□□□ 1.43
C11orf58-206ENST00000525256 IFT140Q96RY7 1462 aa23.94■■□□□ 1.42
C11orf58-206ENST00000525256 TOPBP1Q92547 1522 aa23.93■■□□□ 1.42
C11orf58-206ENST00000525256 RIMBP3CA6NJZ7 1639 aa23.92■■□□□ 1.42
C11orf58-206ENST00000525256 RIMBP3BA6NNM3 1639 aa23.92■■□□□ 1.42
C11orf58-206ENST00000525256 RIMBP3Q9UFD9 1639 aa23.92■■□□□ 1.42
C11orf58-206ENST00000525256 EIF4G3O43432 1585 aaKnown RBP23.91■■□□□ 1.42
C11orf58-206ENST00000525256 DNMBPQ6XZF7 1577 aa23.86■■□□□ 1.41
C11orf58-206ENST00000525256 CHD1O14646 1710 aa23.84■■□□□ 1.41
C11orf58-206ENST00000525256 ABCC8Q09428 1581 aa23.82■■□□□ 1.4
C11orf58-206ENST00000525256 ARHGEF11O15085 1522 aa23.76■■□□□ 1.39
C11orf58-206ENST00000525256 TARBP1Q13395 1621 aaKnown RBP23.73■■□□□ 1.39
C11orf58-206ENST00000525256 AQRO60306 1485 aaKnown RBP eCLIP23.7■■□□□ 1.382e-6■■□□□ 14.2
C11orf58-206ENST00000525256 FBLN2P98095 1184 aa23.69■■□□□ 1.38
C11orf58-206ENST00000525256 POLA1P09884 1462 aaPredicted RBP23.67■■□□□ 1.38
C11orf58-206ENST00000525256 RAD54L2Q9Y4B4 1467 aa23.62■■□□□ 1.37
C11orf58-206ENST00000525256 CYB5RLQ6IPT4 315 aa23.59■■□□□ 1.37
C11orf58-206ENST00000525256 TDRD9Q8NDG6 1382 aaKnown RBP23.54■■□□□ 1.36
C11orf58-206ENST00000525256 SOGA1O94964 1423 aa23.54■■□□□ 1.36
C11orf58-206ENST00000525256 FGD5Q6ZNL6 1462 aa23.54■■□□□ 1.36
C11orf58-206ENST00000525256 SNAPC4Q5SXM2 1469 aa23.52■■□□□ 1.36
C11orf58-206ENST00000525256 ARAP1Q96P48 1450 aa23.51■■□□□ 1.35
C11orf58-206ENST00000525256 TRHP20396 242 aaPredicted RBP23.49■■□□□ 1.35
C11orf58-206ENST00000525256 CUX1P39880 1505 aa23.47■■□□□ 1.35
C11orf58-206ENST00000525256 WDR97A6NE52 1622 aa23.46■■□□□ 1.35
C11orf58-206ENST00000525256 PBRM1Q86U86 1689 aa23.46■■□□□ 1.35
C11orf58-206ENST00000525256 SYNJ1O43426 1573 aa23.44■■□□□ 1.34
C11orf58-206ENST00000525256 CHMP7Q8WUX9 453 aaPredicted RBP23.4■■□□□ 1.34
C11orf58-206ENST00000525256 MAGI1Q96QZ7 1491 aaPredicted RBP23.38■■□□□ 1.33
C11orf58-206ENST00000525256 CLASP1Q7Z460 1538 aa23.38■■□□□ 1.33
C11orf58-206ENST00000525256 GRIN2BQ13224 1484 aa23.37■■□□□ 1.33
C11orf58-206ENST00000525256 SYNJ2O15056 1496 aa23.31■■□□□ 1.32
C11orf58-206ENST00000525256 SUPT5HO00267 1087 aaKnown RBP23.3■■□□□ 1.32
C11orf58-206ENST00000525256 GAPVD1Q14C86 1478 aa23.29■■□□□ 1.32
C11orf58-206ENST00000525256 ABCA5Q8WWZ7 1642 aa23.25■■□□□ 1.31
C11orf58-206ENST00000525256 ABCA10Q8WWZ4 1543 aa23.18■■□□□ 1.3
C11orf58-206ENST00000525256 ADAMTS12P58397 1594 aa23.12■■□□□ 1.29
C11orf58-206ENST00000525256 BIVM-ERCC5R4GMW8 1640 aa23.11■■□□□ 1.29
C11orf58-206ENST00000525256 GRIN2AQ12879 1464 aa23.09■■□□□ 1.29
C11orf58-206ENST00000525256 WRNQ14191 1432 aaPredicted RBP eCLIP23.08■■□□□ 1.29
C11orf58-206ENST00000525256 TOP2BQ02880 1626 aa23.07■■□□□ 1.28
C11orf58-206ENST00000525256 ERCC6L2Q5T890 1561 aa23.06■■□□□ 1.28
C11orf58-206ENST00000525256 CEP170Q5SW79 1584 aa23.06■■□□□ 1.28
C11orf58-206ENST00000525256 FHAD1B1AJZ9 1412 aa22.95■■□□□ 1.26
C11orf58-206ENST00000525256 NUP160Q12769 1436 aa22.93■■□□□ 1.26
C11orf58-206ENST00000525256 AEBP2Q6ZN18 517 aaPredicted RBP22.93■■□□□ 1.26
C11orf58-206ENST00000525256 SHROOM2Q13796 1616 aa22.93■■□□□ 1.26
C11orf58-206ENST00000525256 ERICH3Q5RHP9 1530 aa22.92■■□□□ 1.26
C11orf58-206ENST00000525256 KIF13AQ9H1H9 1805 aa22.82■■□□□ 1.24
C11orf58-206ENST00000525256 PRG4Q92954 1404 aaPredicted RBP22.81■■□□□ 1.24
C11orf58-206ENST00000525256 RUSC2Q8N2Y8 1516 aa22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms