RNA–Protein interactions for RNA: ENST00000527893.5

C11orf58-208, Transcript of chromosome 11 open reading frame 58, humanhuman

TSL 4

Gene C11orf58, Length 813 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf58-208ENST00000527893 AEBP2Q6ZN18 517 aaPredicted RBP26.05■■□□□ 1.76
C11orf58-208ENST00000527893 CHIC1Q5VXU3 224 aa25.83■■□□□ 1.73
C11orf58-208ENST00000527893 NISCHQ9Y2I1 1504 aa24.51■■□□□ 1.51
C11orf58-208ENST00000527893 PHF23Q9BUL5 403 aaPredicted RBP22.76■■□□□ 1.23
C11orf58-208ENST00000527893 SENP3Q9H4L4 574 aaPredicted RBP22.02■■□□□ 1.12
C11orf58-208ENST00000527893 CCDC180Q9P1Z9 1646 aa21.8■■□□□ 1.08
C11orf58-208ENST00000527893 ABCC9O60706 1549 aa21.41■■□□□ 1.02
C11orf58-208ENST00000527893 PLPPR3Q6T4P5 718 aa21.12■□□□□ 0.97
C11orf58-208ENST00000527893 RB1CC1Q8TDY2 1594 aa20.55■□□□□ 0.88
C11orf58-208ENST00000527893 NACADO15069 1562 aa20.53■□□□□ 0.88
C11orf58-208ENST00000527893 DCAF8L2P0C7V8 631 aa20.48■□□□□ 0.87
C11orf58-208ENST00000527893 MYO15BQ96JP2 1530 aa20.39■□□□□ 0.85
C11orf58-208ENST00000527893 ZCCHC6Q5VYS8 1495 aaKnown RBP20.39■□□□□ 0.85
C11orf58-208ENST00000527893 FOXD1Q16676 465 aa20.39■□□□□ 0.85
C11orf58-208ENST00000527893 DCAF1Q9Y4B6 1507 aa20.27■□□□□ 0.84
C11orf58-208ENST00000527893 UNC13AQ9UPW8 1703 aa20.1■□□□□ 0.81
C11orf58-208ENST00000527893 PABPN1Q86U42 306 aaKnown RBP eCLIP20■□□□□ 0.79
C11orf58-208ENST00000527893 BICRAQ9NZM4 1560 aa19.96■□□□□ 0.79
C11orf58-208ENST00000527893 PPP6R1Q9UPN7 881 aa19.94■□□□□ 0.78
C11orf58-208ENST00000527893 ADRA2BP18089 450 aa19.91■□□□□ 0.78
C11orf58-208ENST00000527893 SCRIBQ14160 1630 aa19.88■□□□□ 0.77
C11orf58-208ENST00000527893 DNAJC5BQ9UF47 199 aa19.74■□□□□ 0.75
C11orf58-208ENST00000527893 SHROOM4Q9ULL8 1493 aa19.73■□□□□ 0.75
C11orf58-208ENST00000527893 EIF4G1Q04637 1599 aaKnown RBP19.43■□□□□ 0.7
C11orf58-208ENST00000527893 CC2D2AQ9P2K1 1620 aa19.36■□□□□ 0.69
C11orf58-208ENST00000527893 PIAS4Q8N2W9 510 aaPredicted RBP19.28■□□□□ 0.68
C11orf58-208ENST00000527893 CECR2Q9BXF3 1484 aa19.25■□□□□ 0.67
C11orf58-208ENST00000527893 SMARCA4P51532 1647 aa19.03■□□□□ 0.64
C11orf58-208ENST00000527893 BAZ1AQ9NRL2 1556 aaPredicted RBP18.98■□□□□ 0.63
C11orf58-208ENST00000527893 NCAPD3P42695 1498 aa18.96■□□□□ 0.63
C11orf58-208ENST00000527893 ATAD2BQ9ULI0 1458 aa18.95■□□□□ 0.62
C11orf58-208ENST00000527893 SMARCA2P51531 1590 aa18.91■□□□□ 0.62
C11orf58-208ENST00000527893 MROH2BQ7Z745 1585 aa18.88■□□□□ 0.61
C11orf58-208ENST00000527893 PEG3Q9GZU2 1588 aa18.85■□□□□ 0.61
C11orf58-208ENST00000527893 HMGXB3Q12766 1538 aa18.84■□□□□ 0.61
C11orf58-208ENST00000527893 BAZ1BQ9UIG0 1483 aaKnown RBP18.77■□□□□ 0.6
C11orf58-208ENST00000527893 WIZO95785 1651 aa18.66■□□□□ 0.58
C11orf58-208ENST00000527893 KCNA4P22459 653 aa18.66■□□□□ 0.58
C11orf58-208ENST00000527893 PPP4R3CPQ6ZMV5 832 aa18.66■□□□□ 0.58
C11orf58-208ENST00000527893 MSH5O43196 834 aa18.65■□□□□ 0.58
C11orf58-208ENST00000527893 RSF1Q96T23 1441 aaPredicted RBP18.65■□□□□ 0.58
C11orf58-208ENST00000527893 NESP48681 1621 aa18.51■□□□□ 0.55
C11orf58-208ENST00000527893 TOP2AP11388 1531 aaKnown RBP18.46■□□□□ 0.55
C11orf58-208ENST00000527893 LAMC3Q9Y6N6 1575 aa18.45■□□□□ 0.54
C11orf58-208ENST00000527893 ERCC6Q03468 1493 aa18.45■□□□□ 0.54
C11orf58-208ENST00000527893 CADPSQ9ULU8 1353 aa18.39■□□□□ 0.53
C11orf58-208ENST00000527893 PDS5BQ9NTI5 1447 aa18.33■□□□□ 0.53
C11orf58-208ENST00000527893 CUX2O14529 1486 aa18.3■□□□□ 0.52
C11orf58-208ENST00000527893 KIF21AQ7Z4S6 1674 aa18.28■□□□□ 0.52
C11orf58-208ENST00000527893 CFTRP13569 1480 aa18.27■□□□□ 0.52
C11orf58-208ENST00000527893 NCBP3Q53F19 620 aaKnown RBP18.27■□□□□ 0.52
C11orf58-208ENST00000527893 CCDC88BA6NC98 1476 aa18.26■□□□□ 0.51
C11orf58-208ENST00000527893 THOC2Q8NI27 1593 aaKnown RBP18.25■□□□□ 0.51
C11orf58-208ENST00000527893 SCAF1Q9H7N4 1312 aaKnown RBP18.22■□□□□ 0.51
C11orf58-208ENST00000527893 FANCD2Q9BXW9 1451 aa18.17■□□□□ 0.5
C11orf58-208ENST00000527893 CEP164Q9UPV0 1460 aa18.15■□□□□ 0.5
C11orf58-208ENST00000527893 MRC2Q9UBG0 1479 aa18.14■□□□□ 0.5
C11orf58-208ENST00000527893 PRDM2Q13029 1718 aa18.11■□□□□ 0.49
C11orf58-208ENST00000527893 WDR62O43379 1518 aa18.09■□□□□ 0.49
C11orf58-208ENST00000527893 SUPT5HO00267 1087 aaKnown RBP18.09■□□□□ 0.49
C11orf58-208ENST00000527893 CNKSR2Q8WXI2 1034 aa18.06■□□□□ 0.48
C11orf58-208ENST00000527893 NPM3O75607 178 aaKnown RBP18.02■□□□□ 0.48
C11orf58-208ENST00000527893 URB2Q14146 1524 aaKnown RBP18■□□□□ 0.47
C11orf58-208ENST00000527893 MAPK8IP2Q13387 824 aaPredicted RBP17.95■□□□□ 0.46
C11orf58-208ENST00000527893 TOPBP1Q92547 1522 aa17.88■□□□□ 0.45
C11orf58-208ENST00000527893 ABCC8Q09428 1581 aa17.87■□□□□ 0.45
C11orf58-208ENST00000527893 DNMBPQ6XZF7 1577 aa17.84■□□□□ 0.45
C11orf58-208ENST00000527893 DNAJC5Q9H3Z4 198 aa17.84■□□□□ 0.45
C11orf58-208ENST00000527893 SLC4A1APQ9BWU0 796 aaKnown RBP17.82■□□□□ 0.44
C11orf58-208ENST00000527893 IFT140Q96RY7 1462 aa17.78■□□□□ 0.44
C11orf58-208ENST00000527893 POLA1P09884 1462 aaPredicted RBP17.73■□□□□ 0.43
C11orf58-208ENST00000527893 CUX1P39880 1505 aa17.72■□□□□ 0.43
C11orf58-208ENST00000527893 ZNF608Q9ULD9 1512 aaPredicted RBP17.72■□□□□ 0.43
C11orf58-208ENST00000527893 EHMT2Q96KQ7 1210 aa17.71■□□□□ 0.43
C11orf58-208ENST00000527893 TARBP1Q13395 1621 aaKnown RBP17.69■□□□□ 0.42
C11orf58-208ENST00000527893 DMRT2Q9Y5R5 561 aa17.66■□□□□ 0.42
C11orf58-208ENST00000527893 FGD5Q6ZNL6 1462 aa17.66■□□□□ 0.42
C11orf58-208ENST00000527893 SOGA1O94964 1423 aa17.64■□□□□ 0.42
C11orf58-208ENST00000527893 RAD54L2Q9Y4B4 1467 aa17.64■□□□□ 0.41
C11orf58-208ENST00000527893 EIF4G3O43432 1585 aaKnown RBP17.63■□□□□ 0.41
C11orf58-208ENST00000527893 RNF216Q9NWF9 866 aaPredicted RBP17.63■□□□□ 0.41
C11orf58-208ENST00000527893 AQRO60306 1485 aaKnown RBP eCLIP17.6■□□□□ 0.412e-6■■□□□ 14.2
C11orf58-208ENST00000527893 WRNQ14191 1432 aaPredicted RBP eCLIP17.57■□□□□ 0.4
C11orf58-208ENST00000527893 TDRD9Q8NDG6 1382 aaKnown RBP17.56■□□□□ 0.4
C11orf58-208ENST00000527893 WDR97A6NE52 1622 aa17.54■□□□□ 0.4
C11orf58-208ENST00000527893 TOP2BQ02880 1626 aa17.54■□□□□ 0.4
C11orf58-208ENST00000527893 BIVM-ERCC5R4GMW8 1640 aa17.54■□□□□ 0.4
C11orf58-208ENST00000527893 SYNJ1O43426 1573 aa17.53■□□□□ 0.4
C11orf58-208ENST00000527893 OSCARQ8IYS5 282 aa17.53■□□□□ 0.4
C11orf58-208ENST00000527893 ABCA10Q8WWZ4 1543 aa17.5■□□□□ 0.39
C11orf58-208ENST00000527893 HOXD11P31277 338 aaPredicted RBP17.48■□□□□ 0.39
C11orf58-208ENST00000527893 GRIN2BQ13224 1484 aa17.44■□□□□ 0.38
C11orf58-208ENST00000527893 GAPVD1Q14C86 1478 aa17.44■□□□□ 0.38
C11orf58-208ENST00000527893 CSRNP3Q8WYN3 585 aa17.43■□□□□ 0.38
C11orf58-208ENST00000527893 SNAPC4Q5SXM2 1469 aa17.43■□□□□ 0.38
C11orf58-208ENST00000527893 ABCA5Q8WWZ7 1642 aa17.43■□□□□ 0.38
C11orf58-208ENST00000527893 CHD1O14646 1710 aa17.42■□□□□ 0.38
C11orf58-208ENST00000527893 MAGI1Q96QZ7 1491 aaPredicted RBP17.41■□□□□ 0.38
C11orf58-208ENST00000527893 PBRM1Q86U86 1689 aa17.39■□□□□ 0.37
C11orf58-208ENST00000527893 FBLN2P98095 1184 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms