RNA–Protein interactions for RNA: ENST00000532330.5

BRPF3-209, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 5

Gene BRPF3, Length 4,077 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-209ENST00000532330 NISCHQ9Y2I1 1504 aa23.92■■□□□ 1.42
BRPF3-209ENST00000532330 CCDC180Q9P1Z9 1646 aa20.88■□□□□ 0.93
BRPF3-209ENST00000532330 ZCCHC6Q5VYS8 1495 aaKnown RBP20.15■□□□□ 0.82
BRPF3-209ENST00000532330 DCAF1Q9Y4B6 1507 aa19.98■□□□□ 0.79
BRPF3-209ENST00000532330 MYO15BQ96JP2 1530 aa19.68■□□□□ 0.74
BRPF3-209ENST00000532330 DCAF8L2P0C7V8 631 aa19.56■□□□□ 0.72
BRPF3-209ENST00000532330 SHROOM4Q9ULL8 1493 aa19.44■□□□□ 0.7
BRPF3-209ENST00000532330 NACADO15069 1562 aa19.41■□□□□ 0.7
BRPF3-209ENST00000532330 ABCC9O60706 1549 aa19.2■□□□□ 0.66
BRPF3-209ENST00000532330 RB1CC1Q8TDY2 1594 aa19.15■□□□□ 0.66
BRPF3-209ENST00000532330 SUPT5HO00267 1087 aaKnown RBP18.98■□□□□ 0.63
BRPF3-209ENST00000532330 SCRIBQ14160 1630 aa18.97■□□□□ 0.63
BRPF3-209ENST00000532330 RSF1Q96T23 1441 aaPredicted RBP18.6■□□□□ 0.57
BRPF3-209ENST00000532330 BAZ1AQ9NRL2 1556 aaPredicted RBP18.56■□□□□ 0.56
BRPF3-209ENST00000532330 UNC13AQ9UPW8 1703 aa18.4■□□□□ 0.54
BRPF3-209ENST00000532330 CHIC1Q5VXU3 224 aa18.36■□□□□ 0.53
BRPF3-209ENST00000532330 CECR2Q9BXF3 1484 aa18.34■□□□□ 0.53
BRPF3-209ENST00000532330 MROH2BQ7Z745 1585 aa18.34■□□□□ 0.53
BRPF3-209ENST00000532330 SMARCA4P51532 1647 aa18.31■□□□□ 0.52
BRPF3-209ENST00000532330 BICRAQ9NZM4 1560 aa18.26■□□□□ 0.51
BRPF3-209ENST00000532330 TOP2AP11388 1531 aaKnown RBP18.23■□□□□ 0.51
BRPF3-209ENST00000532330 WIZO95785 1651 aa18.17■□□□□ 0.5
BRPF3-209ENST00000532330 PEG3Q9GZU2 1588 aa18.15■□□□□ 0.5
BRPF3-209ENST00000532330 SMARCA2P51531 1590 aa18.12■□□□□ 0.49
BRPF3-209ENST00000532330 PABPN1Q86U42 306 aaKnown RBP eCLIP18.09■□□□□ 0.49
BRPF3-209ENST00000532330 TRIM41Q8WV44 630 aa18.02■□□□□ 0.48
BRPF3-209ENST00000532330 BAZ1BQ9UIG0 1483 aaKnown RBP17.94■□□□□ 0.46
BRPF3-209ENST00000532330 ATAD2BQ9ULI0 1458 aa17.94■□□□□ 0.46
BRPF3-209ENST00000532330 CCDC88BA6NC98 1476 aa17.92■□□□□ 0.46
BRPF3-209ENST00000532330 HMGXB3Q12766 1538 aa17.87■□□□□ 0.45
BRPF3-209ENST00000532330 NCAPD3P42695 1498 aa17.83■□□□□ 0.45
BRPF3-209ENST00000532330 EIF4G1Q04637 1599 aaKnown RBP17.83■□□□□ 0.44
BRPF3-209ENST00000532330 EEA1Q15075 1411 aa17.77■□□□□ 0.43
BRPF3-209ENST00000532330 WRNQ14191 1432 aaPredicted RBP eCLIP17.61■□□□□ 0.41
BRPF3-209ENST00000532330 ABCC8Q09428 1581 aa17.49■□□□□ 0.39
BRPF3-209ENST00000532330 LOC105371045A0A1W2PR82 267 aa17.47■□□□□ 0.39
BRPF3-209ENST00000532330 CFTRP13569 1480 aa17.47■□□□□ 0.39
BRPF3-209ENST00000532330 FAM9AQ8IZU1 332 aaPredicted RBP17.45■□□□□ 0.38
BRPF3-209ENST00000532330 CC2D2AQ9P2K1 1620 aa17.43■□□□□ 0.38
BRPF3-209ENST00000532330 PRDM2Q13029 1718 aa17.42■□□□□ 0.38
BRPF3-209ENST00000532330 CSRNP3Q8WYN3 585 aa17.42■□□□□ 0.38
BRPF3-209ENST00000532330 TOP2BQ02880 1626 aa17.41■□□□□ 0.38
BRPF3-209ENST00000532330 CADPSQ9ULU8 1353 aa17.38■□□□□ 0.37
BRPF3-209ENST00000532330 BIVM-ERCC5R4GMW8 1640 aa17.38■□□□□ 0.37
BRPF3-209ENST00000532330 GOLGA3Q08378 1498 aa17.37■□□□□ 0.37
BRPF3-209ENST00000532330 TNIKQ9UKE5 1360 aa17.36■□□□□ 0.37
BRPF3-209ENST00000532330 CEP164Q9UPV0 1460 aa17.36■□□□□ 0.37
BRPF3-209ENST00000532330 SYNJ1O43426 1573 aa17.33■□□□□ 0.37
BRPF3-209ENST00000532330 TRIM26Q12899 539 aaPredicted RBP17.31■□□□□ 0.36
BRPF3-209ENST00000532330 KIF21BO75037 1637 aa17.31■□□□□ 0.36
BRPF3-209ENST00000532330 SOGA1O94964 1423 aa17.26■□□□□ 0.35
BRPF3-209ENST00000532330 KIF27Q86VH2 1401 aa17.24■□□□□ 0.35
BRPF3-209ENST00000532330 LAMC3Q9Y6N6 1575 aa17.22■□□□□ 0.35
BRPF3-209ENST00000532330 UBTFP17480 764 aaKnown RBP17.21■□□□□ 0.35
BRPF3-209ENST00000532330 ERICH3Q5RHP9 1530 aa17.19■□□□□ 0.34
BRPF3-209ENST00000532330 CUX1P39880 1505 aa17.17■□□□□ 0.34
BRPF3-209ENST00000532330 CEP162Q5TB80 1403 aa17.16■□□□□ 0.34
BRPF3-209ENST00000532330 PDS5BQ9NTI5 1447 aa17.15■□□□□ 0.34
BRPF3-209ENST00000532330 FANCD2Q9BXW9 1451 aa17.14■□□□□ 0.34
BRPF3-209ENST00000532330 PCGF6Q9BYE7 350 aa17.13■□□□□ 0.33
BRPF3-209ENST00000532330 DNMBPQ6XZF7 1577 aa17.1■□□□□ 0.33
BRPF3-209ENST00000532330 ZEB1P37275 1124 aaPredicted RBP17.07■□□□□ 0.32
BRPF3-209ENST00000532330 RUSC2Q8N2Y8 1516 aa17.07■□□□□ 0.32
BRPF3-209ENST00000532330 PRXQ9BXM0 1461 aa17.05■□□□□ 0.32
BRPF3-209ENST00000532330 APLP2Q06481 763 aa17.04■□□□□ 0.32
BRPF3-209ENST00000532330 CLIP1P30622 1438 aa17.03■□□□□ 0.32
BRPF3-209ENST00000532330 EHMT2Q96KQ7 1210 aa17.01■□□□□ 0.31
BRPF3-209ENST00000532330 FGD5Q6ZNL6 1462 aa17.01■□□□□ 0.31
BRPF3-209ENST00000532330 HRCP23327 699 aa17.01■□□□□ 0.31
BRPF3-209ENST00000532330 CUX2O14529 1486 aa16.99■□□□□ 0.31
BRPF3-209ENST00000532330 TOPBP1Q92547 1522 aa16.96■□□□□ 0.31
BRPF3-209ENST00000532330 RAPGEF2Q9Y4G8 1499 aa16.96■□□□□ 0.3
BRPF3-209ENST00000532330 ABCA10Q8WWZ4 1543 aa16.95■□□□□ 0.3
BRPF3-209ENST00000532330 VPS8Q8N3P4 1428 aa16.94■□□□□ 0.3
BRPF3-209ENST00000532330 CUL7Q14999 1698 aa16.9■□□□□ 0.3
BRPF3-209ENST00000532330 CARMIL1Q5VZK9 1371 aa16.89■□□□□ 0.29
BRPF3-209ENST00000532330 IGF1RP08069 1367 aa16.88■□□□□ 0.29
BRPF3-209ENST00000532330 POLA1P09884 1462 aaPredicted RBP16.87■□□□□ 0.29
BRPF3-209ENST00000532330 WDR97A6NE52 1622 aa16.84■□□□□ 0.29
BRPF3-209ENST00000532330 NESP48681 1621 aa16.84■□□□□ 0.29
BRPF3-209ENST00000532330 MRC2Q9UBG0 1479 aa16.83■□□□□ 0.28
BRPF3-209ENST00000532330 URB2Q14146 1524 aaKnown RBP16.79■□□□□ 0.28
BRPF3-209ENST00000532330 FHAD1B1AJZ9 1412 aa16.77■□□□□ 0.27
BRPF3-209ENST00000532330 EFCAB5A4FU69 1503 aa16.76■□□□□ 0.27
BRPF3-209ENST00000532330 GAPVD1Q14C86 1478 aa16.73■□□□□ 0.27
BRPF3-209ENST00000532330 MAP3K1Q13233 1512 aa16.72■□□□□ 0.27
BRPF3-209ENST00000532330 KIF21AQ7Z4S6 1674 aa16.72■□□□□ 0.27
BRPF3-209ENST00000532330 IFT140Q96RY7 1462 aa16.72■□□□□ 0.27
BRPF3-209ENST00000532330 RAD54L2Q9Y4B4 1467 aa16.71■□□□□ 0.27
BRPF3-209ENST00000532330 ABCA5Q8WWZ7 1642 aa16.71■□□□□ 0.27
BRPF3-209ENST00000532330 ARAP1Q96P48 1450 aa16.68■□□□□ 0.26
BRPF3-209ENST00000532330 WDR62O43379 1518 aa16.66■□□□□ 0.26
BRPF3-209ENST00000532330 ERCC6Q03468 1493 aa16.65■□□□□ 0.26
BRPF3-209ENST00000532330 ARHGAP35Q9NRY4 1499 aa16.65■□□□□ 0.26
BRPF3-209ENST00000532330 CTTNBP2Q8WZ74 1663 aa16.63■□□□□ 0.25
BRPF3-209ENST00000532330 AQRO60306 1485 aaKnown RBP eCLIP16.63■□□□□ 0.256e-9■■■■■ 37.6
BRPF3-209ENST00000532330 GRIN2BQ13224 1484 aa16.62■□□□□ 0.25
BRPF3-209ENST00000532330 TARBP1Q13395 1621 aaKnown RBP16.62■□□□□ 0.25
BRPF3-209ENST00000532330 FMN1Q68DA7 1419 aa16.62■□□□□ 0.25
BRPF3-209ENST00000532330 RANGAP1P46060 587 aaPredicted RBP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms