RNA–Protein interactions for RNA: ENST00000488826.1

ABCB8-217, Transcript of ATP binding cassette subfamily B member 8, humanhuman

TSL 3

Gene ABCB8, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB8-217ENST00000488826 NISCHQ9Y2I1 1504 aa33.81■■■■□ 3
ABCB8-217ENST00000488826 CCDC180Q9P1Z9 1646 aa30.12■■■□□ 2.41
ABCB8-217ENST00000488826 ABCC9O60706 1549 aa29.59■■■□□ 2.33
ABCB8-217ENST00000488826 RB1CC1Q8TDY2 1594 aa28.28■■■□□ 2.12
ABCB8-217ENST00000488826 NACADO15069 1562 aa28.25■■■□□ 2.11
ABCB8-217ENST00000488826 ZCCHC6Q5VYS8 1495 aaKnown RBP28.19■■■□□ 2.1
ABCB8-217ENST00000488826 DCAF8L2P0C7V8 631 aa28.12■■■□□ 2.09
ABCB8-217ENST00000488826 MYO15BQ96JP2 1530 aa28.09■■■□□ 2.09
ABCB8-217ENST00000488826 DCAF1Q9Y4B6 1507 aa27.98■■■□□ 2.07
ABCB8-217ENST00000488826 DNAJC5BQ9UF47 199 aa27.76■■■□□ 2.03
ABCB8-217ENST00000488826 UNC13AQ9UPW8 1703 aa27.75■■■□□ 2.03
ABCB8-217ENST00000488826 PABPN1Q86U42 306 aaKnown RBP eCLIP27.52■■■□□ 2
ABCB8-217ENST00000488826 BICRAQ9NZM4 1560 aa27.46■■□□□ 1.99
ABCB8-217ENST00000488826 SCRIBQ14160 1630 aa27.45■■□□□ 1.98
ABCB8-217ENST00000488826 SHROOM4Q9ULL8 1493 aa27.14■■□□□ 1.94
ABCB8-217ENST00000488826 CC2D2AQ9P2K1 1620 aa26.76■■□□□ 1.87
ABCB8-217ENST00000488826 EIF4G1Q04637 1599 aaKnown RBP26.71■■□□□ 1.87
ABCB8-217ENST00000488826 CECR2Q9BXF3 1484 aa26.66■■□□□ 1.86
ABCB8-217ENST00000488826 SMARCA4P51532 1647 aa26.27■■□□□ 1.8
ABCB8-217ENST00000488826 BAZ1AQ9NRL2 1556 aaPredicted RBP26.2■■□□□ 1.79
ABCB8-217ENST00000488826 ATAD2BQ9ULI0 1458 aa26.07■■□□□ 1.76
ABCB8-217ENST00000488826 MROH2BQ7Z745 1585 aa26.07■■□□□ 1.76
ABCB8-217ENST00000488826 SMARCA2P51531 1590 aa26.05■■□□□ 1.76
ABCB8-217ENST00000488826 NCAPD3P42695 1498 aa26.04■■□□□ 1.76
ABCB8-217ENST00000488826 PEG3Q9GZU2 1588 aa26.01■■□□□ 1.75
ABCB8-217ENST00000488826 HMGXB3Q12766 1538 aa25.96■■□□□ 1.75
ABCB8-217ENST00000488826 BAZ1BQ9UIG0 1483 aaKnown RBP25.86■■□□□ 1.73
ABCB8-217ENST00000488826 WIZO95785 1651 aa25.81■■□□□ 1.72
ABCB8-217ENST00000488826 RSF1Q96T23 1441 aaPredicted RBP25.74■■□□□ 1.71
ABCB8-217ENST00000488826 ERCC6Q03468 1493 aa25.53■■□□□ 1.68
ABCB8-217ENST00000488826 TOP2AP11388 1531 aaKnown RBP25.53■■□□□ 1.68
ABCB8-217ENST00000488826 CUX2O14529 1486 aa25.51■■□□□ 1.67
ABCB8-217ENST00000488826 DNAJC5Q9H3Z4 198 aa25.47■■□□□ 1.67
ABCB8-217ENST00000488826 NESP48681 1621 aa25.44■■□□□ 1.66
ABCB8-217ENST00000488826 LAMC3Q9Y6N6 1575 aa25.39■■□□□ 1.65
ABCB8-217ENST00000488826 CADPSQ9ULU8 1353 aa25.26■■□□□ 1.63
ABCB8-217ENST00000488826 THOC2Q8NI27 1593 aaKnown RBP25.22■■□□□ 1.63
ABCB8-217ENST00000488826 KIF21AQ7Z4S6 1674 aa25.2■■□□□ 1.63
ABCB8-217ENST00000488826 CCDC88BA6NC98 1476 aa25.19■■□□□ 1.62
ABCB8-217ENST00000488826 PDS5BQ9NTI5 1447 aa25.15■■□□□ 1.62
ABCB8-217ENST00000488826 CFTRP13569 1480 aa25.15■■□□□ 1.62
ABCB8-217ENST00000488826 PRDM2Q13029 1718 aa25.09■■□□□ 1.61
ABCB8-217ENST00000488826 SUPT5HO00267 1087 aaKnown RBP25.04■■□□□ 1.6
ABCB8-217ENST00000488826 FANCD2Q9BXW9 1451 aa25■■□□□ 1.59
ABCB8-217ENST00000488826 CEP164Q9UPV0 1460 aa24.97■■□□□ 1.59
ABCB8-217ENST00000488826 MRC2Q9UBG0 1479 aa24.94■■□□□ 1.58
ABCB8-217ENST00000488826 WDR62O43379 1518 aa24.88■■□□□ 1.57
ABCB8-217ENST00000488826 URB2Q14146 1524 aaKnown RBP24.77■■□□□ 1.56
ABCB8-217ENST00000488826 TOPBP1Q92547 1522 aa24.62■■□□□ 1.53
ABCB8-217ENST00000488826 DNMBPQ6XZF7 1577 aa24.62■■□□□ 1.53
ABCB8-217ENST00000488826 ABCC8Q09428 1581 aa24.59■■□□□ 1.53
ABCB8-217ENST00000488826 CUX1P39880 1505 aa24.45■■□□□ 1.51
ABCB8-217ENST00000488826 IFT140Q96RY7 1462 aa24.44■■□□□ 1.5
ABCB8-217ENST00000488826 POLA1P09884 1462 aaPredicted RBP24.41■■□□□ 1.5
ABCB8-217ENST00000488826 TARBP1Q13395 1621 aaKnown RBP24.39■■□□□ 1.49
ABCB8-217ENST00000488826 FGD5Q6ZNL6 1462 aa24.36■■□□□ 1.49
ABCB8-217ENST00000488826 ZNF608Q9ULD9 1512 aaPredicted RBP24.35■■□□□ 1.49
ABCB8-217ENST00000488826 TRIM41Q8WV44 630 aa24.33■■□□□ 1.49
ABCB8-217ENST00000488826 EIF4G3O43432 1585 aaKnown RBP24.3■■□□□ 1.48
ABCB8-217ENST00000488826 BIVM-ERCC5R4GMW8 1640 aa24.29■■□□□ 1.48
ABCB8-217ENST00000488826 OSCARQ8IYS5 282 aa24.29■■□□□ 1.48
ABCB8-217ENST00000488826 RAD54L2Q9Y4B4 1467 aa24.29■■□□□ 1.48
ABCB8-217ENST00000488826 WRNQ14191 1432 aaPredicted RBP eCLIP24.27■■□□□ 1.48
ABCB8-217ENST00000488826 SYNJ1O43426 1573 aa24.27■■□□□ 1.48
ABCB8-217ENST00000488826 TOP2BQ02880 1626 aa24.27■■□□□ 1.48
ABCB8-217ENST00000488826 SOGA1O94964 1423 aa24.27■■□□□ 1.48
ABCB8-217ENST00000488826 WDR97A6NE52 1622 aa24.24■■□□□ 1.47
ABCB8-217ENST00000488826 AQRO60306 1485 aaKnown RBP eCLIP24.19■■□□□ 1.465e-7■■■■■ 28.2
ABCB8-217ENST00000488826 TDRD9Q8NDG6 1382 aaKnown RBP24.13■■□□□ 1.45
ABCB8-217ENST00000488826 ABCA10Q8WWZ4 1543 aa24.12■■□□□ 1.45
ABCB8-217ENST00000488826 ABCA5Q8WWZ7 1642 aa24.07■■□□□ 1.44
ABCB8-217ENST00000488826 RIMBP3CA6NJZ7 1639 aa24.06■■□□□ 1.44
ABCB8-217ENST00000488826 RIMBP3BA6NNM3 1639 aa24.06■■□□□ 1.44
ABCB8-217ENST00000488826 RIMBP3Q9UFD9 1639 aa24.06■■□□□ 1.44
ABCB8-217ENST00000488826 PBRM1Q86U86 1689 aa24.05■■□□□ 1.44
ABCB8-217ENST00000488826 CHD1O14646 1710 aa24.01■■□□□ 1.43
ABCB8-217ENST00000488826 GRIN2BQ13224 1484 aa24■■□□□ 1.43
ABCB8-217ENST00000488826 GAPVD1Q14C86 1478 aa24■■□□□ 1.43
ABCB8-217ENST00000488826 SNAPC4Q5SXM2 1469 aa23.99■■□□□ 1.43
ABCB8-217ENST00000488826 ARHGEF11O15085 1522 aa23.96■■□□□ 1.43
ABCB8-217ENST00000488826 MAGI1Q96QZ7 1491 aaPredicted RBP23.95■■□□□ 1.42
ABCB8-217ENST00000488826 SYNJ2O15056 1496 aa23.86■■□□□ 1.41
ABCB8-217ENST00000488826 ERICH3Q5RHP9 1530 aa23.84■■□□□ 1.41
ABCB8-217ENST00000488826 ADAMTS12P58397 1594 aa23.83■■□□□ 1.41
ABCB8-217ENST00000488826 FBLN2P98095 1184 aa23.83■■□□□ 1.41
ABCB8-217ENST00000488826 CHMP7Q8WUX9 453 aaPredicted RBP23.77■■□□□ 1.4
ABCB8-217ENST00000488826 KIF27Q86VH2 1401 aa23.75■■□□□ 1.39
ABCB8-217ENST00000488826 CYB5RLQ6IPT4 315 aa23.73■■□□□ 1.39
ABCB8-217ENST00000488826 ARAP1Q96P48 1450 aa23.73■■□□□ 1.39
ABCB8-217ENST00000488826 FHAD1B1AJZ9 1412 aa23.72■■□□□ 1.39
ABCB8-217ENST00000488826 CLASP1Q7Z460 1538 aa23.71■■□□□ 1.39
ABCB8-217ENST00000488826 GRIN2AQ12879 1464 aa23.71■■□□□ 1.39
ABCB8-217ENST00000488826 CUL7Q14999 1698 aa23.66■■□□□ 1.38
ABCB8-217ENST00000488826 CEP170Q5SW79 1584 aa23.63■■□□□ 1.37
ABCB8-217ENST00000488826 IGF1RP08069 1367 aa23.63■■□□□ 1.37
ABCB8-217ENST00000488826 NUP160Q12769 1436 aa23.6■■□□□ 1.37
ABCB8-217ENST00000488826 RUSC2Q8N2Y8 1516 aa23.58■■□□□ 1.36
ABCB8-217ENST00000488826 CARMIL1Q5VZK9 1371 aa23.49■■□□□ 1.35
ABCB8-217ENST00000488826 SHROOM2Q13796 1616 aa23.48■■□□□ 1.35
ABCB8-217ENST00000488826 TRHP20396 242 aaPredicted RBP23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms