RNA–Protein interactions for RNA: ENST00000533155.5

NCAPD3-210, Transcript of non-SMC condensin II complex subunit D3, humanhuman

TSL 3

Gene NCAPD3, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3-210ENST00000533155 NISCHQ9Y2I1 1504 aa42.38■■■■■ 4.37
NCAPD3-210ENST00000533155 CCDC180Q9P1Z9 1646 aa37.86■■■■□ 3.65
NCAPD3-210ENST00000533155 ABCC9O60706 1549 aa37.34■■■■□ 3.57
NCAPD3-210ENST00000533155 RB1CC1Q8TDY2 1594 aa35.81■■■■□ 3.32
NCAPD3-210ENST00000533155 NACADO15069 1562 aa35.68■■■■□ 3.3
NCAPD3-210ENST00000533155 DCAF8L2P0C7V8 631 aa35.55■■■■□ 3.28
NCAPD3-210ENST00000533155 MYO15BQ96JP2 1530 aa35.37■■■■□ 3.25
NCAPD3-210ENST00000533155 ZCCHC6Q5VYS8 1495 aaKnown RBP35.22■■■■□ 3.23
NCAPD3-210ENST00000533155 DCAF1Q9Y4B6 1507 aa35.07■■■■□ 3.21
NCAPD3-210ENST00000533155 UNC13AQ9UPW8 1703 aa34.93■■■■□ 3.18
NCAPD3-210ENST00000533155 PABPN1Q86U42 306 aaKnown RBP eCLIP34.81■■■■□ 3.16
NCAPD3-210ENST00000533155 BICRAQ9NZM4 1560 aa34.67■■■■□ 3.14
NCAPD3-210ENST00000533155 DNAJC5BQ9UF47 199 aa34.53■■■■□ 3.12
NCAPD3-210ENST00000533155 SCRIBQ14160 1630 aa34.48■■■■□ 3.11
NCAPD3-210ENST00000533155 SHROOM4Q9ULL8 1493 aa34.39■■■■□ 3.1
NCAPD3-210ENST00000533155 EIF4G1Q04637 1599 aaKnown RBP33.83■■■■□ 3.01
NCAPD3-210ENST00000533155 CC2D2AQ9P2K1 1620 aa33.77■■■■□ 3
NCAPD3-210ENST00000533155 CECR2Q9BXF3 1484 aa33.62■■■□□ 2.97
NCAPD3-210ENST00000533155 SMARCA4P51532 1647 aa32.95■■■□□ 2.87
NCAPD3-210ENST00000533155 NCAPD3P42695 1498 aa32.92■■■□□ 2.86
NCAPD3-210ENST00000533155 BAZ1AQ9NRL2 1556 aaPredicted RBP32.9■■■□□ 2.86
NCAPD3-210ENST00000533155 ATAD2BQ9ULI0 1458 aa32.86■■■□□ 2.85
NCAPD3-210ENST00000533155 SMARCA2P51531 1590 aa32.85■■■□□ 2.85
NCAPD3-210ENST00000533155 HMGXB3Q12766 1538 aa32.74■■■□□ 2.83
NCAPD3-210ENST00000533155 PEG3Q9GZU2 1588 aa32.66■■■□□ 2.82
NCAPD3-210ENST00000533155 MROH2BQ7Z745 1585 aa32.62■■■□□ 2.81
NCAPD3-210ENST00000533155 BAZ1BQ9UIG0 1483 aaKnown RBP32.61■■■□□ 2.81
NCAPD3-210ENST00000533155 ERCC6Q03468 1493 aa32.27■■■□□ 2.76
NCAPD3-210ENST00000533155 WIZO95785 1651 aa32.25■■■□□ 2.75
NCAPD3-210ENST00000533155 NESP48681 1621 aa32.18■■■□□ 2.74
NCAPD3-210ENST00000533155 RSF1Q96T23 1441 aaPredicted RBP32.14■■■□□ 2.74
NCAPD3-210ENST00000533155 LAMC3Q9Y6N6 1575 aa32.12■■■□□ 2.73
NCAPD3-210ENST00000533155 CUX2O14529 1486 aa32.06■■■□□ 2.72
NCAPD3-210ENST00000533155 CADPSQ9ULU8 1353 aa31.94■■■□□ 2.7
NCAPD3-210ENST00000533155 PDS5BQ9NTI5 1447 aa31.93■■■□□ 2.7
NCAPD3-210ENST00000533155 TOP2AP11388 1531 aaKnown RBP31.93■■■□□ 2.7
NCAPD3-210ENST00000533155 KIF21AQ7Z4S6 1674 aa31.81■■■□□ 2.68
NCAPD3-210ENST00000533155 THOC2Q8NI27 1593 aaKnown RBP31.81■■■□□ 2.68
NCAPD3-210ENST00000533155 CFTRP13569 1480 aa31.67■■■□□ 2.66
NCAPD3-210ENST00000533155 MRC2Q9UBG0 1479 aa31.6■■■□□ 2.65
NCAPD3-210ENST00000533155 FANCD2Q9BXW9 1451 aa31.58■■■□□ 2.65
NCAPD3-210ENST00000533155 CEP164Q9UPV0 1460 aa31.58■■■□□ 2.65
NCAPD3-210ENST00000533155 CCDC88BA6NC98 1476 aa31.53■■■□□ 2.64
NCAPD3-210ENST00000533155 WDR62O43379 1518 aa31.5■■■□□ 2.63
NCAPD3-210ENST00000533155 DNAJC5Q9H3Z4 198 aa31.45■■■□□ 2.63
NCAPD3-210ENST00000533155 PRDM2Q13029 1718 aa31.41■■■□□ 2.62
NCAPD3-210ENST00000533155 URB2Q14146 1524 aaKnown RBP31.25■■■□□ 2.59
NCAPD3-210ENST00000533155 SUPT5HO00267 1087 aaKnown RBP31.1■■■□□ 2.57
NCAPD3-210ENST00000533155 ABCC8Q09428 1581 aa31.05■■■□□ 2.56
NCAPD3-210ENST00000533155 TOPBP1Q92547 1522 aa31.02■■■□□ 2.56
NCAPD3-210ENST00000533155 DNMBPQ6XZF7 1577 aa30.96■■■□□ 2.55
NCAPD3-210ENST00000533155 IFT140Q96RY7 1462 aa30.94■■■□□ 2.54
NCAPD3-210ENST00000533155 ZNF608Q9ULD9 1512 aaPredicted RBP30.78■■■□□ 2.52
NCAPD3-210ENST00000533155 POLA1P09884 1462 aaPredicted RBP30.73■■■□□ 2.51
NCAPD3-210ENST00000533155 TARBP1Q13395 1621 aaKnown RBP30.69■■■□□ 2.5
NCAPD3-210ENST00000533155 EIF4G3O43432 1585 aaKnown RBP30.66■■■□□ 2.5
NCAPD3-210ENST00000533155 OSCARQ8IYS5 282 aa30.65■■■□□ 2.5
NCAPD3-210ENST00000533155 CUX1P39880 1505 aa30.63■■■□□ 2.49
NCAPD3-210ENST00000533155 SOGA1O94964 1423 aa30.61■■■□□ 2.49
NCAPD3-210ENST00000533155 FGD5Q6ZNL6 1462 aa30.6■■■□□ 2.49
NCAPD3-210ENST00000533155 RAD54L2Q9Y4B4 1467 aa30.57■■■□□ 2.48
NCAPD3-210ENST00000533155 AQRO60306 1485 aaKnown RBP eCLIP30.57■■■□□ 2.48
NCAPD3-210ENST00000533155 WDR97A6NE52 1622 aa30.5■■■□□ 2.47
NCAPD3-210ENST00000533155 TDRD9Q8NDG6 1382 aaKnown RBP30.46■■■□□ 2.47
NCAPD3-210ENST00000533155 WRNQ14191 1432 aaPredicted RBP eCLIP30.34■■■□□ 2.45
NCAPD3-210ENST00000533155 CHD1O14646 1710 aa30.33■■■□□ 2.45
NCAPD3-210ENST00000533155 TOP2BQ02880 1626 aa30.31■■■□□ 2.44
NCAPD3-210ENST00000533155 ABCA10Q8WWZ4 1543 aa30.31■■■□□ 2.44
NCAPD3-210ENST00000533155 GRIN2BQ13224 1484 aa30.31■■■□□ 2.44
NCAPD3-210ENST00000533155 FBLN2P98095 1184 aa30.3■■■□□ 2.44
NCAPD3-210ENST00000533155 SNAPC4Q5SXM2 1469 aa30.3■■■□□ 2.44
NCAPD3-210ENST00000533155 BIVM-ERCC5R4GMW8 1640 aa30.29■■■□□ 2.44
NCAPD3-210ENST00000533155 MAGI1Q96QZ7 1491 aaPredicted RBP30.27■■■□□ 2.44
NCAPD3-210ENST00000533155 GAPVD1Q14C86 1478 aa30.25■■■□□ 2.43
NCAPD3-210ENST00000533155 TRIM41Q8WV44 630 aa30.25■■■□□ 2.43
NCAPD3-210ENST00000533155 SYNJ1O43426 1573 aa30.24■■■□□ 2.43
NCAPD3-210ENST00000533155 ABCA5Q8WWZ7 1642 aa30.2■■■□□ 2.43
NCAPD3-210ENST00000533155 PBRM1Q86U86 1689 aa30.2■■■□□ 2.42
NCAPD3-210ENST00000533155 CHMP7Q8WUX9 453 aaPredicted RBP30.18■■■□□ 2.42
NCAPD3-210ENST00000533155 RIMBP3CA6NJZ7 1639 aa30.17■■■□□ 2.42
NCAPD3-210ENST00000533155 RIMBP3BA6NNM3 1639 aa30.17■■■□□ 2.42
NCAPD3-210ENST00000533155 RIMBP3Q9UFD9 1639 aa30.17■■■□□ 2.42
NCAPD3-210ENST00000533155 SYNJ2O15056 1496 aa30.15■■■□□ 2.42
NCAPD3-210ENST00000533155 ARHGEF11O15085 1522 aa30.14■■■□□ 2.42
NCAPD3-210ENST00000533155 CLASP1Q7Z460 1538 aa30.01■■■□□ 2.39
NCAPD3-210ENST00000533155 ERICH3Q5RHP9 1530 aa29.95■■■□□ 2.38
NCAPD3-210ENST00000533155 ADAMTS12P58397 1594 aa29.94■■■□□ 2.38
NCAPD3-210ENST00000533155 GRIN2AQ12879 1464 aa29.91■■■□□ 2.38
NCAPD3-210ENST00000533155 FHAD1B1AJZ9 1412 aa29.9■■■□□ 2.38
NCAPD3-210ENST00000533155 CYB5RLQ6IPT4 315 aa29.87■■■□□ 2.37
NCAPD3-210ENST00000533155 ARAP1Q96P48 1450 aa29.86■■■□□ 2.37
NCAPD3-210ENST00000533155 NUP160Q12769 1436 aa29.79■■■□□ 2.36
NCAPD3-210ENST00000533155 CEP170Q5SW79 1584 aa29.75■■■□□ 2.35
NCAPD3-210ENST00000533155 KIF27Q86VH2 1401 aa29.75■■■□□ 2.35
NCAPD3-210ENST00000533155 IGF1RP08069 1367 aa29.64■■■□□ 2.33
NCAPD3-210ENST00000533155 CUL7Q14999 1698 aa29.62■■■□□ 2.33
NCAPD3-210ENST00000533155 SHROOM2Q13796 1616 aa29.6■■■□□ 2.33
NCAPD3-210ENST00000533155 ERCC6L2Q5T890 1561 aa29.52■■■□□ 2.32
NCAPD3-210ENST00000533155 RUSC2Q8N2Y8 1516 aa29.5■■■□□ 2.31
NCAPD3-210ENST00000533155 JPH4Q96JJ6 628 aa29.48■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms