RNA–Protein interactions for RNA: ENST00000527902.5

NXF1-206, Transcript of nuclear RNA export factor 1, humanhuman

TSL 3

Gene NXF1, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-206ENST00000527902 NISCHQ9Y2I1 1504 aa43.08■■■■■ 4.49
NXF1-206ENST00000527902 CCDC180Q9P1Z9 1646 aa38.23■■■■□ 3.71
NXF1-206ENST00000527902 ABCC9O60706 1549 aa37.2■■■■□ 3.55
NXF1-206ENST00000527902 ZCCHC6Q5VYS8 1495 aaKnown RBP35.94■■■■□ 3.34
NXF1-206ENST00000527902 NACADO15069 1562 aa35.85■■■■□ 3.33
NXF1-206ENST00000527902 RB1CC1Q8TDY2 1594 aa35.85■■■■□ 3.33
NXF1-206ENST00000527902 DCAF8L2P0C7V8 631 aa35.81■■■■□ 3.32
NXF1-206ENST00000527902 MYO15BQ96JP2 1530 aa35.68■■■■□ 3.3
NXF1-206ENST00000527902 DCAF1Q9Y4B6 1507 aa35.62■■■■□ 3.29
NXF1-206ENST00000527902 UNC13AQ9UPW8 1703 aa35.2■■■■□ 3.23
NXF1-206ENST00000527902 SCRIBQ14160 1630 aa34.93■■■■□ 3.18
NXF1-206ENST00000527902 BICRAQ9NZM4 1560 aa34.85■■■■□ 3.17
NXF1-206ENST00000527902 PABPN1Q86U42 306 aaKnown RBP eCLIP34.77■■■■□ 3.169e-7■□□□□ 8.8
NXF1-206ENST00000527902 SHROOM4Q9ULL8 1493 aa34.37■■■■□ 3.09
NXF1-206ENST00000527902 DNAJC5BQ9UF47 199 aa33.99■■■■□ 3.03
NXF1-206ENST00000527902 EIF4G1Q04637 1599 aaKnown RBP33.86■■■■□ 3.01
NXF1-206ENST00000527902 CC2D2AQ9P2K1 1620 aa33.69■■■□□ 2.98
NXF1-206ENST00000527902 CECR2Q9BXF3 1484 aa33.57■■■□□ 2.97
NXF1-206ENST00000527902 SMARCA4P51532 1647 aa33.42■■■□□ 2.94
NXF1-206ENST00000527902 BAZ1AQ9NRL2 1556 aaPredicted RBP33.35■■■□□ 2.93
NXF1-206ENST00000527902 MROH2BQ7Z745 1585 aa33.24■■■□□ 2.91
NXF1-206ENST00000527902 ATAD2BQ9ULI0 1458 aa33.15■■■□□ 2.9
NXF1-206ENST00000527902 SMARCA2P51531 1590 aa33.09■■■□□ 2.89
NXF1-206ENST00000527902 NCAPD3P42695 1498 aa33.07■■■□□ 2.88
NXF1-206ENST00000527902 PEG3Q9GZU2 1588 aa33.07■■■□□ 2.88
NXF1-206ENST00000527902 HMGXB3Q12766 1538 aa32.96■■■□□ 2.87
NXF1-206ENST00000527902 WIZO95785 1651 aa32.91■■■□□ 2.86
NXF1-206ENST00000527902 RSF1Q96T23 1441 aaPredicted RBP32.9■■■□□ 2.86
NXF1-206ENST00000527902 BAZ1BQ9UIG0 1483 aaKnown RBP32.86■■■□□ 2.85
NXF1-206ENST00000527902 TOP2AP11388 1531 aaKnown RBP32.53■■■□□ 2.8
NXF1-206ENST00000527902 NESP48681 1621 aa32.29■■■□□ 2.76
NXF1-206ENST00000527902 LAMC3Q9Y6N6 1575 aa32.18■■■□□ 2.74
NXF1-206ENST00000527902 SUPT5HO00267 1087 aaKnown RBP32.16■■■□□ 2.74
NXF1-206ENST00000527902 CCDC88BA6NC98 1476 aa32.14■■■□□ 2.74
NXF1-206ENST00000527902 CADPSQ9ULU8 1353 aa32.1■■■□□ 2.73
NXF1-206ENST00000527902 ERCC6Q03468 1493 aa31.99■■■□□ 2.71
NXF1-206ENST00000527902 CFTRP13569 1480 aa31.98■■■□□ 2.71
NXF1-206ENST00000527902 KIF21AQ7Z4S6 1674 aa31.96■■■□□ 2.71
NXF1-206ENST00000527902 PDS5BQ9NTI5 1447 aa31.9■■■□□ 2.7
NXF1-206ENST00000527902 PRDM2Q13029 1718 aa31.86■■■□□ 2.69
NXF1-206ENST00000527902 THOC2Q8NI27 1593 aaKnown RBP31.78■■■□□ 2.68
NXF1-206ENST00000527902 FANCD2Q9BXW9 1451 aa31.77■■■□□ 2.68
NXF1-206ENST00000527902 CEP164Q9UPV0 1460 aa31.7■■■□□ 2.66
NXF1-206ENST00000527902 MRC2Q9UBG0 1479 aa31.62■■■□□ 2.65
NXF1-206ENST00000527902 CUX2O14529 1486 aa31.59■■■□□ 2.65
NXF1-206ENST00000527902 WDR62O43379 1518 aa31.54■■■□□ 2.64
NXF1-206ENST00000527902 URB2Q14146 1524 aaKnown RBP31.48■■■□□ 2.63
NXF1-206ENST00000527902 TOPBP1Q92547 1522 aa31.3■■■□□ 2.6
NXF1-206ENST00000527902 DNMBPQ6XZF7 1577 aa31.29■■■□□ 2.6
NXF1-206ENST00000527902 ABCC8Q09428 1581 aa31.22■■■□□ 2.59
NXF1-206ENST00000527902 CUX1P39880 1505 aa31.17■■■□□ 2.58
NXF1-206ENST00000527902 POLA1P09884 1462 aaPredicted RBP31.05■■■□□ 2.56
NXF1-206ENST00000527902 IFT140Q96RY7 1462 aa31.01■■■□□ 2.56
NXF1-206ENST00000527902 FGD5Q6ZNL6 1462 aa31.01■■■□□ 2.55
NXF1-206ENST00000527902 TARBP1Q13395 1621 aaKnown RBP30.99■■■□□ 2.55
NXF1-206ENST00000527902 SYNJ1O43426 1573 aa30.98■■■□□ 2.55
NXF1-206ENST00000527902 WRNQ14191 1432 aaPredicted RBP eCLIP30.98■■■□□ 2.55
NXF1-206ENST00000527902 BIVM-ERCC5R4GMW8 1640 aa30.96■■■□□ 2.55
NXF1-206ENST00000527902 TOP2BQ02880 1626 aa30.94■■■□□ 2.54
NXF1-206ENST00000527902 RAD54L2Q9Y4B4 1467 aa30.93■■■□□ 2.54
NXF1-206ENST00000527902 ZNF608Q9ULD9 1512 aaPredicted RBP30.93■■■□□ 2.54
NXF1-206ENST00000527902 SOGA1O94964 1423 aa30.87■■■□□ 2.53
NXF1-206ENST00000527902 EIF4G3O43432 1585 aaKnown RBP30.83■■■□□ 2.53
NXF1-206ENST00000527902 WDR97A6NE52 1622 aa30.82■■■□□ 2.52
NXF1-206ENST00000527902 AQRO60306 1485 aaKnown RBP eCLIP30.74■■■□□ 2.513e-10■■■■□ 22.5
NXF1-206ENST00000527902 TDRD9Q8NDG6 1382 aaKnown RBP30.7■■■□□ 2.51
NXF1-206ENST00000527902 ABCA10Q8WWZ4 1543 aa30.7■■■□□ 2.51
NXF1-206ENST00000527902 ABCA5Q8WWZ7 1642 aa30.62■■■□□ 2.49
NXF1-206ENST00000527902 PBRM1Q86U86 1689 aa30.55■■■□□ 2.48
NXF1-206ENST00000527902 GAPVD1Q14C86 1478 aa30.54■■■□□ 2.48
NXF1-206ENST00000527902 GRIN2BQ13224 1484 aa30.5■■■□□ 2.47
NXF1-206ENST00000527902 SNAPC4Q5SXM2 1469 aa30.47■■■□□ 2.47
NXF1-206ENST00000527902 CHD1O14646 1710 aa30.43■■■□□ 2.46
NXF1-206ENST00000527902 MAGI1Q96QZ7 1491 aaPredicted RBP30.4■■■□□ 2.46
NXF1-206ENST00000527902 DNAJC5Q9H3Z4 198 aa30.37■■■□□ 2.45
NXF1-206ENST00000527902 TRIM41Q8WV44 630 aa30.33■■■□□ 2.45
NXF1-206ENST00000527902 ERICH3Q5RHP9 1530 aa30.32■■■□□ 2.44
NXF1-206ENST00000527902 ADAMTS12P58397 1594 aa30.3■■■□□ 2.44
NXF1-206ENST00000527902 SYNJ2O15056 1496 aa30.29■■■□□ 2.44
NXF1-206ENST00000527902 KIF27Q86VH2 1401 aa30.29■■■□□ 2.44
NXF1-206ENST00000527902 FBLN2P98095 1184 aa30.26■■■□□ 2.43
NXF1-206ENST00000527902 OSCARQ8IYS5 282 aa30.26■■■□□ 2.43
NXF1-206ENST00000527902 CHMP7Q8WUX9 453 aaPredicted RBP30.19■■■□□ 2.42
NXF1-206ENST00000527902 RUSC2Q8N2Y8 1516 aa30.18■■■□□ 2.42
NXF1-206ENST00000527902 FHAD1B1AJZ9 1412 aa30.18■■■□□ 2.42
NXF1-206ENST00000527902 IGF1RP08069 1367 aa30.16■■■□□ 2.42
NXF1-206ENST00000527902 CHIC1Q5VXU3 224 aa30.15■■■□□ 2.42
NXF1-206ENST00000527902 GRIN2AQ12879 1464 aa30.13■■■□□ 2.41
NXF1-206ENST00000527902 CUL7Q14999 1698 aa30.11■■■□□ 2.41
NXF1-206ENST00000527902 CLASP1Q7Z460 1538 aa30.06■■■□□ 2.4
NXF1-206ENST00000527902 CEP170Q5SW79 1584 aa30.03■■■□□ 2.4
NXF1-206ENST00000527902 NUP160Q12769 1436 aa29.99■■■□□ 2.39
NXF1-206ENST00000527902 CARMIL1Q5VZK9 1371 aa29.97■■■□□ 2.39
NXF1-206ENST00000527902 RIMBP3CA6NJZ7 1639 aa29.89■■■□□ 2.38
NXF1-206ENST00000527902 RIMBP3BA6NNM3 1639 aa29.89■■■□□ 2.38
NXF1-206ENST00000527902 RIMBP3Q9UFD9 1639 aa29.89■■■□□ 2.38
NXF1-206ENST00000527902 ARHGEF11O15085 1522 aa29.88■■■□□ 2.37
NXF1-206ENST00000527902 RAPGEF2Q9Y4G8 1499 aa29.83■■■□□ 2.37
NXF1-206ENST00000527902 EEA1Q15075 1411 aa29.81■■■□□ 2.36
NXF1-206ENST00000527902 PRXQ9BXM0 1461 aa29.8■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 106.5 ms