RNA–Protein interactions for RNA: ENST00000581767.1

DDX42-214, Transcript of DEAD-box helicase 42, humanhuman

Gene DDX42, Length 2,244 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-214ENST00000581767 NISCHQ9Y2I1 1504 aa21.17■□□□□ 0.98
DDX42-214ENST00000581767 CCDC180Q9P1Z9 1646 aa18.98■□□□□ 0.63
DDX42-214ENST00000581767 ABCC9O60706 1549 aa18.83■□□□□ 0.6
DDX42-214ENST00000581767 RB1CC1Q8TDY2 1594 aa18.02■□□□□ 0.48
DDX42-214ENST00000581767 NACADO15069 1562 aa17.92■□□□□ 0.46
DDX42-214ENST00000581767 DCAF8L2P0C7V8 631 aa17.83■□□□□ 0.45
DDX42-214ENST00000581767 MYO15BQ96JP2 1530 aa17.71■□□□□ 0.43
DDX42-214ENST00000581767 ZCCHC6Q5VYS8 1495 aaKnown RBP17.57■□□□□ 0.4
DDX42-214ENST00000581767 UNC13AQ9UPW8 1703 aa17.54■□□□□ 0.4
DDX42-214ENST00000581767 PABPN1Q86U42 306 aaKnown RBP eCLIP17.53■□□□□ 0.41e-6■■□□□ 14.2
DDX42-214ENST00000581767 DCAF1Q9Y4B6 1507 aa17.53■□□□□ 0.4
DDX42-214ENST00000581767 DNAJC5BQ9UF47 199 aa17.5■□□□□ 0.39
DDX42-214ENST00000581767 BICRAQ9NZM4 1560 aa17.42■□□□□ 0.38
DDX42-214ENST00000581767 SHROOM4Q9ULL8 1493 aa17.29■□□□□ 0.36
DDX42-214ENST00000581767 SCRIBQ14160 1630 aa17.27■□□□□ 0.35
DDX42-214ENST00000581767 CC2D2AQ9P2K1 1620 aa17.02■□□□□ 0.31
DDX42-214ENST00000581767 EIF4G1Q04637 1599 aaKnown RBP17.02■□□□□ 0.31
DDX42-214ENST00000581767 CECR2Q9BXF3 1484 aa16.97■□□□□ 0.31
DDX42-214ENST00000581767 NCAPD3P42695 1498 aa16.52■□□□□ 0.24
DDX42-214ENST00000581767 SMARCA4P51532 1647 aa16.49■□□□□ 0.23
DDX42-214ENST00000581767 ATAD2BQ9ULI0 1458 aa16.48■□□□□ 0.23
DDX42-214ENST00000581767 SMARCA2P51531 1590 aa16.47■□□□□ 0.23
DDX42-214ENST00000581767 BAZ1AQ9NRL2 1556 aaPredicted RBP16.45■□□□□ 0.22
DDX42-214ENST00000581767 HMGXB3Q12766 1538 aa16.42■□□□□ 0.22
DDX42-214ENST00000581767 BAZ1BQ9UIG0 1483 aaKnown RBP16.35■□□□□ 0.21
DDX42-214ENST00000581767 PEG3Q9GZU2 1588 aa16.33■□□□□ 0.21
DDX42-214ENST00000581767 MROH2BQ7Z745 1585 aa16.29■□□□□ 0.2
DDX42-214ENST00000581767 ERCC6Q03468 1493 aa16.29■□□□□ 0.2
DDX42-214ENST00000581767 CUX2O14529 1486 aa16.23■□□□□ 0.19
DDX42-214ENST00000581767 NESP48681 1621 aa16.18■□□□□ 0.18
DDX42-214ENST00000581767 LAMC3Q9Y6N6 1575 aa16.15■□□□□ 0.18
DDX42-214ENST00000581767 WIZO95785 1651 aa16.1■□□□□ 0.17
DDX42-214ENST00000581767 PDS5BQ9NTI5 1447 aa16.07■□□□□ 0.16
DDX42-214ENST00000581767 DNAJC5Q9H3Z4 198 aa16.06■□□□□ 0.16
DDX42-214ENST00000581767 CADPSQ9ULU8 1353 aa16.03■□□□□ 0.16
DDX42-214ENST00000581767 THOC2Q8NI27 1593 aaKnown RBP16.02■□□□□ 0.15
DDX42-214ENST00000581767 RSF1Q96T23 1441 aaPredicted RBP16.01■□□□□ 0.15
DDX42-214ENST00000581767 KIF21AQ7Z4S6 1674 aa16■□□□□ 0.15
DDX42-214ENST00000581767 TOP2AP11388 1531 aaKnown RBP15.95■□□□□ 0.14
DDX42-214ENST00000581767 MRC2Q9UBG0 1479 aa15.91■□□□□ 0.14
DDX42-214ENST00000581767 CEP164Q9UPV0 1460 aa15.87■□□□□ 0.13
DDX42-214ENST00000581767 CFTRP13569 1480 aa15.86■□□□□ 0.13
DDX42-214ENST00000581767 FANCD2Q9BXW9 1451 aa15.85■□□□□ 0.13
DDX42-214ENST00000581767 WDR62O43379 1518 aa15.84■□□□□ 0.13
DDX42-214ENST00000581767 CCDC88BA6NC98 1476 aa15.74■□□□□ 0.11
DDX42-214ENST00000581767 PRDM2Q13029 1718 aa15.73■□□□□ 0.11
DDX42-214ENST00000581767 URB2Q14146 1524 aaKnown RBP15.69■□□□□ 0.1
DDX42-214ENST00000581767 ABCC8Q09428 1581 aa15.59■□□□□ 0.09
DDX42-214ENST00000581767 IFT140Q96RY7 1462 aa15.56■□□□□ 0.08
DDX42-214ENST00000581767 TOPBP1Q92547 1522 aa15.55■□□□□ 0.08
DDX42-214ENST00000581767 DNMBPQ6XZF7 1577 aa15.52■□□□□ 0.08
DDX42-214ENST00000581767 OSCARQ8IYS5 282 aa15.5■□□□□ 0.07
DDX42-214ENST00000581767 ZNF608Q9ULD9 1512 aaPredicted RBP15.46■□□□□ 0.06
DDX42-214ENST00000581767 TRIM41Q8WV44 630 aa15.4■□□□□ 0.06
DDX42-214ENST00000581767 EIF4G3O43432 1585 aaKnown RBP15.4■□□□□ 0.06
DDX42-214ENST00000581767 SUPT5HO00267 1087 aaKnown RBP15.39■□□□□ 0.05
DDX42-214ENST00000581767 TARBP1Q13395 1621 aaKnown RBP15.39■□□□□ 0.05
DDX42-214ENST00000581767 POLA1P09884 1462 aaPredicted RBP15.39■□□□□ 0.05
DDX42-214ENST00000581767 SOGA1O94964 1423 aa15.35■□□□□ 0.05
DDX42-214ENST00000581767 AQRO60306 1485 aaKnown RBP eCLIP15.34■□□□□ 0.05
DDX42-214ENST00000581767 FGD5Q6ZNL6 1462 aa15.32■□□□□ 0.04
DDX42-214ENST00000581767 RAD54L2Q9Y4B4 1467 aa15.32■□□□□ 0.04
DDX42-214ENST00000581767 WDR97A6NE52 1622 aa15.31■□□□□ 0.04
DDX42-214ENST00000581767 CUX1P39880 1505 aa15.31■□□□□ 0.04
DDX42-214ENST00000581767 TDRD9Q8NDG6 1382 aaKnown RBP15.27■□□□□ 0.04
DDX42-214ENST00000581767 CHD1O14646 1710 aa15.26■□□□□ 0.03
DDX42-214ENST00000581767 RIMBP3CA6NJZ7 1639 aa15.26■□□□□ 0.03
DDX42-214ENST00000581767 RIMBP3BA6NNM3 1639 aa15.26■□□□□ 0.03
DDX42-214ENST00000581767 RIMBP3Q9UFD9 1639 aa15.26■□□□□ 0.03
DDX42-214ENST00000581767 FBLN2P98095 1184 aa15.25■□□□□ 0.03
DDX42-214ENST00000581767 ARHGEF11O15085 1522 aa15.22■□□□□ 0.03
DDX42-214ENST00000581767 GRIN2BQ13224 1484 aa15.21■□□□□ 0.03
DDX42-214ENST00000581767 SNAPC4Q5SXM2 1469 aa15.21■□□□□ 0.03
DDX42-214ENST00000581767 MAGI1Q96QZ7 1491 aaPredicted RBP15.2■□□□□ 0.02
DDX42-214ENST00000581767 CHMP7Q8WUX9 453 aaPredicted RBP15.17■□□□□ 0.02
DDX42-214ENST00000581767 ABCA10Q8WWZ4 1543 aa15.16■□□□□ 0.02
DDX42-214ENST00000581767 GAPVD1Q14C86 1478 aa15.16■□□□□ 0.02
DDX42-214ENST00000581767 SYNJ1O43426 1573 aa15.14■□□□□ 0.01
DDX42-214ENST00000581767 WRNQ14191 1432 aaPredicted RBP eCLIP15.14■□□□□ 0.01
DDX42-214ENST00000581767 PBRM1Q86U86 1689 aa15.14■□□□□ 0.01
DDX42-214ENST00000581767 SYNJ2O15056 1496 aa15.14■□□□□ 0.01
DDX42-214ENST00000581767 ABCA5Q8WWZ7 1642 aa15.12■□□□□ 0.01
DDX42-214ENST00000581767 BIVM-ERCC5R4GMW8 1640 aa15.12■□□□□ 0.01
DDX42-214ENST00000581767 TOP2BQ02880 1626 aa15.11■□□□□ 0.01
DDX42-214ENST00000581767 CLASP1Q7Z460 1538 aa15.1■□□□□ 0.01
DDX42-214ENST00000581767 CYB5RLQ6IPT4 315 aa15.1■□□□□ 0.01
DDX42-214ENST00000581767 ARAP1Q96P48 1450 aa15.07■□□□□ 0
DDX42-214ENST00000581767 ADAMTS12P58397 1594 aa15□□□□□ -0.01
DDX42-214ENST00000581767 GRIN2AQ12879 1464 aa15□□□□□ -0.01
DDX42-214ENST00000581767 FHAD1B1AJZ9 1412 aa14.99□□□□□ -0.01
DDX42-214ENST00000581767 ERICH3Q5RHP9 1530 aa14.99□□□□□ -0.01
DDX42-214ENST00000581767 NUP160Q12769 1436 aa14.94□□□□□ -0.02
DDX42-214ENST00000581767 TRHP20396 242 aaPredicted RBP14.93□□□□□ -0.02
DDX42-214ENST00000581767 CEP170Q5SW79 1584 aa14.92□□□□□ -0.02
DDX42-214ENST00000581767 SHROOM2Q13796 1616 aa14.86□□□□□ -0.03
DDX42-214ENST00000581767 KIF27Q86VH2 1401 aa14.85□□□□□ -0.03
DDX42-214ENST00000581767 ERCC6L2Q5T890 1561 aa14.83□□□□□ -0.04
DDX42-214ENST00000581767 CUL7Q14999 1698 aa14.8□□□□□ -0.04
DDX42-214ENST00000581767 JPH4Q96JJ6 628 aa14.8□□□□□ -0.04
DDX42-214ENST00000581767 IGF1RP08069 1367 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms