RNA–Protein interactions for RNA: ENST00000621737.4

PTBP1-219, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 5

Gene PTBP1, Length 1,125 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-219ENST00000621737 NISCHQ9Y2I1 1504 aa48.67■■■■■ 5.38
PTBP1-219ENST00000621737 CCDC180Q9P1Z9 1646 aa43.53■■■■■ 4.56
PTBP1-219ENST00000621737 ABCC9O60706 1549 aa42.92■■■■■ 4.46
PTBP1-219ENST00000621737 RB1CC1Q8TDY2 1594 aa41.14■■■■■ 4.18
PTBP1-219ENST00000621737 NACADO15069 1562 aa40.99■■■■■ 4.15
PTBP1-219ENST00000621737 DCAF8L2P0C7V8 631 aa40.71■■■■■ 4.11
PTBP1-219ENST00000621737 MYO15BQ96JP2 1530 aa40.63■■■■■ 4.1
PTBP1-219ENST00000621737 ZCCHC6Q5VYS8 1495 aaKnown RBP40.48■■■■■ 4.07
PTBP1-219ENST00000621737 DCAF1Q9Y4B6 1507 aa40.29■■■■■ 4.04
PTBP1-219ENST00000621737 UNC13AQ9UPW8 1703 aa40.22■■■■■ 4.03
PTBP1-219ENST00000621737 PABPN1Q86U42 306 aaKnown RBP eCLIP39.97■■■■□ 3.99
PTBP1-219ENST00000621737 BICRAQ9NZM4 1560 aa39.91■■■■□ 3.98
PTBP1-219ENST00000621737 DNAJC5BQ9UF47 199 aa39.72■■■■□ 3.95
PTBP1-219ENST00000621737 SCRIBQ14160 1630 aa39.63■■■■□ 3.93
PTBP1-219ENST00000621737 SHROOM4Q9ULL8 1493 aa39.51■■■■□ 3.92
PTBP1-219ENST00000621737 EIF4G1Q04637 1599 aaKnown RBP38.9■■■■□ 3.82
PTBP1-219ENST00000621737 CC2D2AQ9P2K1 1620 aa38.83■■■■□ 3.81
PTBP1-219ENST00000621737 CECR2Q9BXF3 1484 aa38.63■■■■□ 3.77
PTBP1-219ENST00000621737 SMARCA4P51532 1647 aa37.88■■■■□ 3.65
PTBP1-219ENST00000621737 NCAPD3P42695 1498 aa37.8■■■■□ 3.64
PTBP1-219ENST00000621737 BAZ1AQ9NRL2 1556 aaPredicted RBP37.77■■■■□ 3.64
PTBP1-219ENST00000621737 ATAD2BQ9ULI0 1458 aa37.75■■■■□ 3.63
PTBP1-219ENST00000621737 SMARCA2P51531 1590 aa37.72■■■■□ 3.63
PTBP1-219ENST00000621737 HMGXB3Q12766 1538 aa37.62■■■■□ 3.61
PTBP1-219ENST00000621737 PEG3Q9GZU2 1588 aa37.54■■■■□ 3.6
PTBP1-219ENST00000621737 MROH2BQ7Z745 1585 aa37.49■■■■□ 3.59
PTBP1-219ENST00000621737 BAZ1BQ9UIG0 1483 aaKnown RBP37.43■■■■□ 3.58
PTBP1-219ENST00000621737 WIZO95785 1651 aa37.07■■■■□ 3.52
PTBP1-219ENST00000621737 ERCC6Q03468 1493 aa37.04■■■■□ 3.52
PTBP1-219ENST00000621737 NESP48681 1621 aa37.01■■■■□ 3.52
PTBP1-219ENST00000621737 LAMC3Q9Y6N6 1575 aa36.91■■■■□ 3.5
PTBP1-219ENST00000621737 RSF1Q96T23 1441 aaPredicted RBP36.89■■■■□ 3.5
PTBP1-219ENST00000621737 CUX2O14529 1486 aa36.84■■■■□ 3.49
PTBP1-219ENST00000621737 TOP2AP11388 1531 aaKnown RBP36.69■■■■□ 3.46
PTBP1-219ENST00000621737 CADPSQ9ULU8 1353 aa36.66■■■■□ 3.46
PTBP1-219ENST00000621737 PDS5BQ9NTI5 1447 aa36.64■■■■□ 3.46
PTBP1-219ENST00000621737 THOC2Q8NI27 1593 aaKnown RBP36.61■■■■□ 3.45
PTBP1-219ENST00000621737 KIF21AQ7Z4S6 1674 aa36.61■■■■□ 3.45
PTBP1-219ENST00000621737 CFTRP13569 1480 aa36.37■■■■□ 3.41
PTBP1-219ENST00000621737 MRC2Q9UBG0 1479 aa36.31■■■■□ 3.4
PTBP1-219ENST00000621737 CEP164Q9UPV0 1460 aa36.27■■■■□ 3.4
PTBP1-219ENST00000621737 FANCD2Q9BXW9 1451 aa36.25■■■■□ 3.39
PTBP1-219ENST00000621737 WDR62O43379 1518 aa36.23■■■■□ 3.39
PTBP1-219ENST00000621737 CCDC88BA6NC98 1476 aa36.2■■■■□ 3.39
PTBP1-219ENST00000621737 DNAJC5Q9H3Z4 198 aa36.14■■■■□ 3.38
PTBP1-219ENST00000621737 PRDM2Q13029 1718 aa36.12■■■■□ 3.37
PTBP1-219ENST00000621737 URB2Q14146 1524 aaKnown RBP35.93■■■■□ 3.34
PTBP1-219ENST00000621737 TOPBP1Q92547 1522 aa35.63■■■■□ 3.29
PTBP1-219ENST00000621737 ABCC8Q09428 1581 aa35.61■■■■□ 3.29
PTBP1-219ENST00000621737 DNMBPQ6XZF7 1577 aa35.58■■■■□ 3.29
PTBP1-219ENST00000621737 SUPT5HO00267 1087 aaKnown RBP35.55■■■■□ 3.28
PTBP1-219ENST00000621737 IFT140Q96RY7 1462 aa35.53■■■■□ 3.28
PTBP1-219ENST00000621737 ZNF608Q9ULD9 1512 aaPredicted RBP35.38■■■■□ 3.25
PTBP1-219ENST00000621737 POLA1P09884 1462 aaPredicted RBP35.31■■■■□ 3.24
PTBP1-219ENST00000621737 TARBP1Q13395 1621 aaKnown RBP35.31■■■■□ 3.24
PTBP1-219ENST00000621737 EIF4G3O43432 1585 aaKnown RBP35.27■■■■□ 3.24
PTBP1-219ENST00000621737 CUX1P39880 1505 aa35.21■■■■□ 3.23
PTBP1-219ENST00000621737 FGD5Q6ZNL6 1462 aa35.16■■■■□ 3.22
PTBP1-219ENST00000621737 OSCARQ8IYS5 282 aa35.15■■■■□ 3.22
PTBP1-219ENST00000621737 RAD54L2Q9Y4B4 1467 aa35.12■■■■□ 3.21
PTBP1-219ENST00000621737 SOGA1O94964 1423 aa35.12■■■■□ 3.21
PTBP1-219ENST00000621737 AQRO60306 1485 aaKnown RBP eCLIP35.1■■■■□ 3.213e-9■■■■■ 37.5
PTBP1-219ENST00000621737 WDR97A6NE52 1622 aa35.04■■■■□ 3.2
PTBP1-219ENST00000621737 TDRD9Q8NDG6 1382 aaKnown RBP34.96■■■■□ 3.19
PTBP1-219ENST00000621737 CHD1O14646 1710 aa34.9■■■■□ 3.18
PTBP1-219ENST00000621737 BIVM-ERCC5R4GMW8 1640 aa34.83■■■■□ 3.17
PTBP1-219ENST00000621737 TOP2BQ02880 1626 aa34.81■■■■□ 3.16
PTBP1-219ENST00000621737 SNAPC4Q5SXM2 1469 aa34.81■■■■□ 3.16
PTBP1-219ENST00000621737 WRNQ14191 1432 aaPredicted RBP eCLIP34.81■■■■□ 3.164e-6■□□□□ 10.4
PTBP1-219ENST00000621737 ABCA10Q8WWZ4 1543 aa34.8■■■■□ 3.16
PTBP1-219ENST00000621737 GRIN2BQ13224 1484 aa34.79■■■■□ 3.16
PTBP1-219ENST00000621737 SYNJ1O43426 1573 aa34.77■■■■□ 3.16
PTBP1-219ENST00000621737 MAGI1Q96QZ7 1491 aaPredicted RBP34.77■■■■□ 3.16
PTBP1-219ENST00000621737 ABCA5Q8WWZ7 1642 aa34.73■■■■□ 3.15
PTBP1-219ENST00000621737 TRIM41Q8WV44 630 aa34.73■■■■□ 3.15
PTBP1-219ENST00000621737 PBRM1Q86U86 1689 aa34.73■■■■□ 3.15
PTBP1-219ENST00000621737 GAPVD1Q14C86 1478 aa34.72■■■■□ 3.15
PTBP1-219ENST00000621737 FBLN2P98095 1184 aa34.72■■■■□ 3.15
PTBP1-219ENST00000621737 RIMBP3CA6NJZ7 1639 aa34.71■■■■□ 3.15
PTBP1-219ENST00000621737 RIMBP3BA6NNM3 1639 aa34.71■■■■□ 3.15
PTBP1-219ENST00000621737 RIMBP3Q9UFD9 1639 aa34.71■■■■□ 3.15
PTBP1-219ENST00000621737 ARHGEF11O15085 1522 aa34.65■■■■□ 3.14
PTBP1-219ENST00000621737 SYNJ2O15056 1496 aa34.63■■■■□ 3.13
PTBP1-219ENST00000621737 CHMP7Q8WUX9 453 aaPredicted RBP34.58■■■■□ 3.13
PTBP1-219ENST00000621737 CLASP1Q7Z460 1538 aa34.52■■■■□ 3.12
PTBP1-219ENST00000621737 ADAMTS12P58397 1594 aa34.43■■■■□ 3.1
PTBP1-219ENST00000621737 ERICH3Q5RHP9 1530 aa34.39■■■■□ 3.1
PTBP1-219ENST00000621737 GRIN2AQ12879 1464 aa34.35■■■■□ 3.09
PTBP1-219ENST00000621737 ARAP1Q96P48 1450 aa34.34■■■■□ 3.09
PTBP1-219ENST00000621737 FHAD1B1AJZ9 1412 aa34.32■■■■□ 3.08
PTBP1-219ENST00000621737 CYB5RLQ6IPT4 315 aa34.27■■■■□ 3.08
PTBP1-219ENST00000621737 NUP160Q12769 1436 aa34.22■■■■□ 3.07
PTBP1-219ENST00000621737 CEP170Q5SW79 1584 aa34.21■■■■□ 3.07
PTBP1-219ENST00000621737 KIF27Q86VH2 1401 aa34.12■■■■□ 3.05
PTBP1-219ENST00000621737 SHROOM2Q13796 1616 aa34.04■■■■□ 3.04
PTBP1-219ENST00000621737 CUL7Q14999 1698 aa34.02■■■■□ 3.04
PTBP1-219ENST00000621737 IGF1RP08069 1367 aa33.99■■■■□ 3.03
PTBP1-219ENST00000621737 ERCC6L2Q5T890 1561 aa33.98■■■■□ 3.03
PTBP1-219ENST00000621737 RUSC2Q8N2Y8 1516 aa33.94■■■■□ 3.02
PTBP1-219ENST00000621737 PRG4Q92954 1404 aaPredicted RBP33.81■■■■□ 3
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms