RNA–Protein interactions for RNA: ENST00000228136.8

C11orf58-201, Transcript of chromosome 11 open reading frame 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf58, Length 2,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf58-201ENST00000228136 NISCHQ9Y2I1 1504 aa41.68■■■■■ 4.26
C11orf58-201ENST00000228136 CCDC180Q9P1Z9 1646 aa36.5■■■■□ 3.43
C11orf58-201ENST00000228136 ZCCHC6Q5VYS8 1495 aaKnown RBP34.95■■■■□ 3.18
C11orf58-201ENST00000228136 ABCC9O60706 1549 aa34.86■■■■□ 3.17
C11orf58-201ENST00000228136 DCAF8L2P0C7V8 631 aa34.58■■■■□ 3.13
C11orf58-201ENST00000228136 DCAF1Q9Y4B6 1507 aa34.4■■■■□ 3.1
C11orf58-201ENST00000228136 MYO15BQ96JP2 1530 aa34.11■■■■□ 3.05
C11orf58-201ENST00000228136 NACADO15069 1562 aa34.04■■■■□ 3.04
C11orf58-201ENST00000228136 RB1CC1Q8TDY2 1594 aa33.85■■■■□ 3.01
C11orf58-201ENST00000228136 SHROOM4Q9ULL8 1493 aa33.85■■■■□ 3.01
C11orf58-201ENST00000228136 SCRIBQ14160 1630 aa33.59■■■□□ 2.97
C11orf58-201ENST00000228136 UNC13AQ9UPW8 1703 aa33.27■■■□□ 2.92
C11orf58-201ENST00000228136 BICRAQ9NZM4 1560 aa32.88■■■□□ 2.85
C11orf58-201ENST00000228136 PABPN1Q86U42 306 aaKnown RBP eCLIP32.81■■■□□ 2.841e-5■□□□□ 8.6
C11orf58-201ENST00000228136 CECR2Q9BXF3 1484 aa32.45■■■□□ 2.79
C11orf58-201ENST00000228136 SUPT5HO00267 1087 aaKnown RBP32.38■■■□□ 2.77
C11orf58-201ENST00000228136 MROH2BQ7Z745 1585 aa32.22■■■□□ 2.75
C11orf58-201ENST00000228136 RSF1Q96T23 1441 aaPredicted RBP32.21■■■□□ 2.75
C11orf58-201ENST00000228136 BAZ1AQ9NRL2 1556 aaPredicted RBP32.2■■■□□ 2.75
C11orf58-201ENST00000228136 SMARCA4P51532 1647 aa32.14■■■□□ 2.73
C11orf58-201ENST00000228136 WIZO95785 1651 aa31.98■■■□□ 2.71
C11orf58-201ENST00000228136 EIF4G1Q04637 1599 aaKnown RBP31.91■■■□□ 2.7
C11orf58-201ENST00000228136 PEG3Q9GZU2 1588 aa31.71■■■□□ 2.67
C11orf58-201ENST00000228136 ATAD2BQ9ULI0 1458 aa31.66■■■□□ 2.66
C11orf58-201ENST00000228136 SMARCA2P51531 1590 aa31.63■■■□□ 2.65
C11orf58-201ENST00000228136 TOP2AP11388 1531 aaKnown RBP31.57■■■□□ 2.65
C11orf58-201ENST00000228136 CC2D2AQ9P2K1 1620 aa31.54■■■□□ 2.64
C11orf58-201ENST00000228136 BAZ1BQ9UIG0 1483 aaKnown RBP31.47■■■□□ 2.63
C11orf58-201ENST00000228136 NCAPD3P42695 1498 aa31.41■■■□□ 2.62
C11orf58-201ENST00000228136 HMGXB3Q12766 1538 aa31.36■■■□□ 2.61
C11orf58-201ENST00000228136 CCDC88BA6NC98 1476 aa31.25■■■□□ 2.59
C11orf58-201ENST00000228136 DNAJC5BQ9UF47 199 aa31.05■■■□□ 2.56
C11orf58-201ENST00000228136 CHIC1Q5VXU3 224 aa30.77■■■□□ 2.52
C11orf58-201ENST00000228136 CFTRP13569 1480 aa30.65■■■□□ 2.5
C11orf58-201ENST00000228136 CADPSQ9ULU8 1353 aa30.6■■■□□ 2.49
C11orf58-201ENST00000228136 ABCC8Q09428 1581 aa30.56■■■□□ 2.48
C11orf58-201ENST00000228136 PRDM2Q13029 1718 aa30.54■■■□□ 2.48
C11orf58-201ENST00000228136 NESP48681 1621 aa30.52■■■□□ 2.48
C11orf58-201ENST00000228136 LAMC3Q9Y6N6 1575 aa30.43■■■□□ 2.46
C11orf58-201ENST00000228136 TRIM41Q8WV44 630 aa30.42■■■□□ 2.46
C11orf58-201ENST00000228136 WRNQ14191 1432 aaPredicted RBP eCLIP30.33■■■□□ 2.45
C11orf58-201ENST00000228136 FANCD2Q9BXW9 1451 aa30.29■■■□□ 2.44
C11orf58-201ENST00000228136 SYNJ1O43426 1573 aa30.27■■■□□ 2.44
C11orf58-201ENST00000228136 PDS5BQ9NTI5 1447 aa30.18■■■□□ 2.42
C11orf58-201ENST00000228136 KIF21AQ7Z4S6 1674 aa30.17■■■□□ 2.42
C11orf58-201ENST00000228136 CUX1P39880 1505 aa30.15■■■□□ 2.42
C11orf58-201ENST00000228136 CEP164Q9UPV0 1460 aa30.14■■■□□ 2.41
C11orf58-201ENST00000228136 TOP2BQ02880 1626 aa30.14■■■□□ 2.41
C11orf58-201ENST00000228136 BIVM-ERCC5R4GMW8 1640 aa30.12■■■□□ 2.41
C11orf58-201ENST00000228136 DNMBPQ6XZF7 1577 aa29.96■■■□□ 2.39
C11orf58-201ENST00000228136 URB2Q14146 1524 aaKnown RBP29.95■■■□□ 2.39
C11orf58-201ENST00000228136 TOPBP1Q92547 1522 aa29.94■■■□□ 2.38
C11orf58-201ENST00000228136 FAM9AQ8IZU1 332 aaPredicted RBP29.92■■■□□ 2.38
C11orf58-201ENST00000228136 ERCC6Q03468 1493 aa29.9■■■□□ 2.38
C11orf58-201ENST00000228136 SOGA1O94964 1423 aa29.87■■■□□ 2.37
C11orf58-201ENST00000228136 FGD5Q6ZNL6 1462 aa29.87■■■□□ 2.37
C11orf58-201ENST00000228136 MRC2Q9UBG0 1479 aa29.84■■■□□ 2.37
C11orf58-201ENST00000228136 RUSC2Q8N2Y8 1516 aa29.81■■■□□ 2.36
C11orf58-201ENST00000228136 POLA1P09884 1462 aaPredicted RBP29.77■■■□□ 2.36
C11orf58-201ENST00000228136 THOC2Q8NI27 1593 aaKnown RBP29.73■■■□□ 2.35
C11orf58-201ENST00000228136 WDR62O43379 1518 aa29.7■■■□□ 2.35
C11orf58-201ENST00000228136 RAD54L2Q9Y4B4 1467 aa29.69■■■□□ 2.34
C11orf58-201ENST00000228136 EEA1Q15075 1411 aa29.65■■■□□ 2.34
C11orf58-201ENST00000228136 LOC105371045A0A1W2PR82 267 aa29.63■■■□□ 2.33
C11orf58-201ENST00000228136 CUX2O14529 1486 aa29.61■■■□□ 2.33
C11orf58-201ENST00000228136 EHMT2Q96KQ7 1210 aa29.57■■■□□ 2.32
C11orf58-201ENST00000228136 KIF27Q86VH2 1401 aa29.56■■■□□ 2.32
C11orf58-201ENST00000228136 CSRNP3Q8WYN3 585 aa29.56■■■□□ 2.32
C11orf58-201ENST00000228136 ABCA10Q8WWZ4 1543 aa29.56■■■□□ 2.32
C11orf58-201ENST00000228136 WDR97A6NE52 1622 aa29.55■■■□□ 2.32
C11orf58-201ENST00000228136 TARBP1Q13395 1621 aaKnown RBP29.53■■■□□ 2.32
C11orf58-201ENST00000228136 TDRD9Q8NDG6 1382 aaKnown RBP29.42■■■□□ 2.3
C11orf58-201ENST00000228136 IFT140Q96RY7 1462 aa29.4■■■□□ 2.3
C11orf58-201ENST00000228136 ABCA5Q8WWZ7 1642 aa29.39■■■□□ 2.3
C11orf58-201ENST00000228136 KIF21BO75037 1637 aa29.35■■■□□ 2.29
C11orf58-201ENST00000228136 IGF1RP08069 1367 aa29.34■■■□□ 2.29
C11orf58-201ENST00000228136 ZNF608Q9ULD9 1512 aaPredicted RBP29.32■■■□□ 2.28
C11orf58-201ENST00000228136 GAPVD1Q14C86 1478 aa29.32■■■□□ 2.28
C11orf58-201ENST00000228136 AQRO60306 1485 aaKnown RBP eCLIP29.29■■■□□ 2.282e-6■■□□□ 14.2
C11orf58-201ENST00000228136 PRXQ9BXM0 1461 aa29.29■■■□□ 2.28
C11orf58-201ENST00000228136 GOLGA3Q08378 1498 aa29.29■■■□□ 2.28
C11orf58-201ENST00000228136 RAPGEF2Q9Y4G8 1499 aa29.28■■■□□ 2.28
C11orf58-201ENST00000228136 PBRM1Q86U86 1689 aa29.24■■■□□ 2.27
C11orf58-201ENST00000228136 EIF4G3O43432 1585 aaKnown RBP29.23■■■□□ 2.27
C11orf58-201ENST00000228136 ERICH3Q5RHP9 1530 aa29.21■■■□□ 2.27
C11orf58-201ENST00000228136 CARMIL1Q5VZK9 1371 aa29.19■■■□□ 2.26
C11orf58-201ENST00000228136 UBTFP17480 764 aaKnown RBP29.19■■■□□ 2.26
C11orf58-201ENST00000228136 CUL7Q14999 1698 aa29.17■■■□□ 2.26
C11orf58-201ENST00000228136 GRIN2BQ13224 1484 aa29.12■■■□□ 2.25
C11orf58-201ENST00000228136 TNIKQ9UKE5 1360 aa29.1■■■□□ 2.25
C11orf58-201ENST00000228136 ADAMTS12P58397 1594 aa29.03■■■□□ 2.24
C11orf58-201ENST00000228136 SNAPC4Q5SXM2 1469 aa29.01■■■□□ 2.23
C11orf58-201ENST00000228136 FHAD1B1AJZ9 1412 aa28.97■■■□□ 2.23
C11orf58-201ENST00000228136 CEP162Q5TB80 1403 aa28.97■■■□□ 2.23
C11orf58-201ENST00000228136 MAGI1Q96QZ7 1491 aaPredicted RBP28.92■■■□□ 2.22
C11orf58-201ENST00000228136 RANGAP1P46060 587 aaPredicted RBP28.89■■■□□ 2.22
C11orf58-201ENST00000228136 CTTNBP2Q8WZ74 1663 aa28.85■■■□□ 2.21
C11orf58-201ENST00000228136 SYNJ2O15056 1496 aa28.82■■■□□ 2.2
C11orf58-201ENST00000228136 CLIP1P30622 1438 aa28.82■■■□□ 2.2
C11orf58-201ENST00000228136 GRIN2AQ12879 1464 aa28.79■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms