RNA–Protein interactions for RNA: ENST00000517386.1

HMBOX1-204, Transcript of homeobox containing 1, humanhuman

TSL 4

Gene HMBOX1, Length 761 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-204ENST00000517386 AEBP2Q6ZN18 517 aaPredicted RBP23.25■■□□□ 1.31
HMBOX1-204ENST00000517386 CHIC1Q5VXU3 224 aa21.56■■□□□ 1.04
HMBOX1-204ENST00000517386 SENP3Q9H4L4 574 aaPredicted RBP19.87■□□□□ 0.77
HMBOX1-204ENST00000517386 NISCHQ9Y2I1 1504 aa19.66■□□□□ 0.74
HMBOX1-204ENST00000517386 PHF23Q9BUL5 403 aaPredicted RBP19.55■□□□□ 0.72
HMBOX1-204ENST00000517386 POTEDQ86YR6 584 aa19.26■□□□□ 0.67
HMBOX1-204ENST00000517386 FOXD1Q16676 465 aa18.74■□□□□ 0.59
HMBOX1-204ENST00000517386 ABCC9O60706 1549 aa17.88■□□□□ 0.45
HMBOX1-204ENST00000517386 MSH5O43196 834 aa17.81■□□□□ 0.44
HMBOX1-204ENST00000517386 CCDC180Q9P1Z9 1646 aa17.58■□□□□ 0.4
HMBOX1-204ENST00000517386 PIAS4Q8N2W9 510 aaPredicted RBP17.23■□□□□ 0.35
HMBOX1-204ENST00000517386 DNAJC5BQ9UF47 199 aa16.89■□□□□ 0.29
HMBOX1-204ENST00000517386 DCAF8L2P0C7V8 631 aa16.86■□□□□ 0.29
HMBOX1-204ENST00000517386 RB1CC1Q8TDY2 1594 aa16.83■□□□□ 0.28
HMBOX1-204ENST00000517386 PPP6R1Q9UPN7 881 aa16.8■□□□□ 0.28
HMBOX1-204ENST00000517386 PABPN1Q86U42 306 aaKnown RBP eCLIP16.7■□□□□ 0.26
HMBOX1-204ENST00000517386 ADRA2BP18089 450 aa16.68■□□□□ 0.26
HMBOX1-204ENST00000517386 NACADO15069 1562 aa16.67■□□□□ 0.26
HMBOX1-204ENST00000517386 UNC13AQ9UPW8 1703 aa16.47■□□□□ 0.23
HMBOX1-204ENST00000517386 BICRAQ9NZM4 1560 aa16.38■□□□□ 0.21
HMBOX1-204ENST00000517386 MYO15BQ96JP2 1530 aa16.33■□□□□ 0.2
HMBOX1-204ENST00000517386 PLPPR3Q6T4P5 718 aa16.26■□□□□ 0.19
HMBOX1-204ENST00000517386 ZCCHC6Q5VYS8 1495 aaKnown RBP16.25■□□□□ 0.19
HMBOX1-204ENST00000517386 SCRIBQ14160 1630 aa16.19■□□□□ 0.18
HMBOX1-204ENST00000517386 DCAF1Q9Y4B6 1507 aa16.12■□□□□ 0.17
HMBOX1-204ENST00000517386 CC2D2AQ9P2K1 1620 aa16.06■□□□□ 0.16
HMBOX1-204ENST00000517386 CECR2Q9BXF3 1484 aa16.06■□□□□ 0.16
HMBOX1-204ENST00000517386 CACNB1Q02641 598 aaPredicted RBP16.02■□□□□ 0.16
HMBOX1-204ENST00000517386 SHROOM4Q9ULL8 1493 aa16■□□□□ 0.15
HMBOX1-204ENST00000517386 EIF4G1Q04637 1599 aaKnown RBP15.99■□□□□ 0.15
HMBOX1-204ENST00000517386 MAPK8IP2Q13387 824 aaPredicted RBP15.67■□□□□ 0.1
HMBOX1-204ENST00000517386 DMRT2Q9Y5R5 561 aa15.62■□□□□ 0.09
HMBOX1-204ENST00000517386 DNAJC5Q9H3Z4 198 aa15.48■□□□□ 0.07
HMBOX1-204ENST00000517386 NCAPD3P42695 1498 aa15.41■□□□□ 0.06
HMBOX1-204ENST00000517386 ERCC6Q03468 1493 aa15.41■□□□□ 0.06
HMBOX1-204ENST00000517386 ATAD2BQ9ULI0 1458 aa15.4■□□□□ 0.06
HMBOX1-204ENST00000517386 SMARCA4P51532 1647 aa15.35■□□□□ 0.05
HMBOX1-204ENST00000517386 NESP48681 1621 aa15.34■□□□□ 0.05
HMBOX1-204ENST00000517386 SMARCA2P51531 1590 aa15.31■□□□□ 0.04
HMBOX1-204ENST00000517386 CUX2O14529 1486 aa15.3■□□□□ 0.04
HMBOX1-204ENST00000517386 HMGXB3Q12766 1538 aa15.27■□□□□ 0.03
HMBOX1-204ENST00000517386 BAZ1BQ9UIG0 1483 aaKnown RBP15.27■□□□□ 0.03
HMBOX1-204ENST00000517386 BAZ1AQ9NRL2 1556 aaPredicted RBP15.24■□□□□ 0.03
HMBOX1-204ENST00000517386 MROH2BQ7Z745 1585 aa15.2■□□□□ 0.02
HMBOX1-204ENST00000517386 RNF39Q9H2S5 420 aa15.17■□□□□ 0.02
HMBOX1-204ENST00000517386 DCAF8L1A6NGE4 600 aa15.12■□□□□ 0.01
HMBOX1-204ENST00000517386 PEG3Q9GZU2 1588 aa15.11■□□□□ 0.01
HMBOX1-204ENST00000517386 SCAF1Q9H7N4 1312 aaKnown RBP15.1■□□□□ 0.01
HMBOX1-204ENST00000517386 THOC2Q8NI27 1593 aaKnown RBP15.09■□□□□ 0.01
HMBOX1-204ENST00000517386 LAMC3Q9Y6N6 1575 aa15.07■□□□□ 0
HMBOX1-204ENST00000517386 KIF21AQ7Z4S6 1674 aa15.06■□□□□ 0
HMBOX1-204ENST00000517386 PDS5BQ9NTI5 1447 aa15.03■□□□□ -0
HMBOX1-204ENST00000517386 WIZO95785 1651 aa15.02□□□□□ -0.01
HMBOX1-204ENST00000517386 CADPSQ9ULU8 1353 aa14.99□□□□□ -0.01
HMBOX1-204ENST00000517386 MRC2Q9UBG0 1479 aa14.91□□□□□ -0.02
HMBOX1-204ENST00000517386 TRIM41Q8WV44 630 aa14.91□□□□□ -0.02
HMBOX1-204ENST00000517386 POTEHQ6S545 545 aa14.87□□□□□ -0.03
HMBOX1-204ENST00000517386 WDR62O43379 1518 aa14.85□□□□□ -0.03
HMBOX1-204ENST00000517386 RSF1Q96T23 1441 aaPredicted RBP14.84□□□□□ -0.03
HMBOX1-204ENST00000517386 FANCD2Q9BXW9 1451 aa14.84□□□□□ -0.03
HMBOX1-204ENST00000517386 CEP164Q9UPV0 1460 aa14.84□□□□□ -0.03
HMBOX1-204ENST00000517386 C1QBPQ07021 282 aaKnown RBP14.84□□□□□ -0.03
HMBOX1-204ENST00000517386 CFTRP13569 1480 aa14.77□□□□□ -0.04
HMBOX1-204ENST00000517386 TOP2AP11388 1531 aaKnown RBP14.76□□□□□ -0.05
HMBOX1-204ENST00000517386 URB2Q14146 1524 aaKnown RBP14.73□□□□□ -0.05
HMBOX1-204ENST00000517386 OSCARQ8IYS5 282 aa14.68□□□□□ -0.06
HMBOX1-204ENST00000517386 CCDC88BA6NC98 1476 aa14.65□□□□□ -0.06
HMBOX1-204ENST00000517386 HOXD11P31277 338 aaPredicted RBP14.62□□□□□ -0.07
HMBOX1-204ENST00000517386 ZNF608Q9ULD9 1512 aaPredicted RBP14.61□□□□□ -0.07
HMBOX1-204ENST00000517386 TOPBP1Q92547 1522 aa14.54□□□□□ -0.08
HMBOX1-204ENST00000517386 PRDM2Q13029 1718 aa14.54□□□□□ -0.08
HMBOX1-204ENST00000517386 IFT140Q96RY7 1462 aa14.53□□□□□ -0.08
HMBOX1-204ENST00000517386 RIMBP3CA6NJZ7 1639 aa14.48□□□□□ -0.09
HMBOX1-204ENST00000517386 RIMBP3BA6NNM3 1639 aa14.48□□□□□ -0.09
HMBOX1-204ENST00000517386 RIMBP3Q9UFD9 1639 aa14.48□□□□□ -0.09
HMBOX1-204ENST00000517386 AQRO60306 1485 aaKnown RBP eCLIP14.47□□□□□ -0.093e-6■■■□□ 18.4
HMBOX1-204ENST00000517386 FBLN2P98095 1184 aa14.47□□□□□ -0.09
HMBOX1-204ENST00000517386 EIF4G3O43432 1585 aaKnown RBP14.45□□□□□ -0.1
HMBOX1-204ENST00000517386 DNMBPQ6XZF7 1577 aa14.44□□□□□ -0.1
HMBOX1-204ENST00000517386 ARHGEF11O15085 1522 aa14.42□□□□□ -0.1
HMBOX1-204ENST00000517386 CYB5RLQ6IPT4 315 aa14.42□□□□□ -0.1
HMBOX1-204ENST00000517386 RAD54L2Q9Y4B4 1467 aa14.41□□□□□ -0.1
HMBOX1-204ENST00000517386 ABCC8Q09428 1581 aa14.41□□□□□ -0.1
HMBOX1-204ENST00000517386 POLA1P09884 1462 aaPredicted RBP14.39□□□□□ -0.11
HMBOX1-204ENST00000517386 TDRD9Q8NDG6 1382 aaKnown RBP14.39□□□□□ -0.11
HMBOX1-204ENST00000517386 TARBP1Q13395 1621 aaKnown RBP14.39□□□□□ -0.11
HMBOX1-204ENST00000517386 CHD1O14646 1710 aa14.37□□□□□ -0.11
HMBOX1-204ENST00000517386 SOGA1O94964 1423 aa14.34□□□□□ -0.11
HMBOX1-204ENST00000517386 TRHP20396 242 aaPredicted RBP14.31□□□□□ -0.12
HMBOX1-204ENST00000517386 FGD5Q6ZNL6 1462 aa14.31□□□□□ -0.12
HMBOX1-204ENST00000517386 ARAP1Q96P48 1450 aa14.3□□□□□ -0.12
HMBOX1-204ENST00000517386 SUPT5HO00267 1087 aaKnown RBP14.29□□□□□ -0.12
HMBOX1-204ENST00000517386 SNAPC4Q5SXM2 1469 aa14.29□□□□□ -0.12
HMBOX1-204ENST00000517386 CUX1P39880 1505 aa14.28□□□□□ -0.12
HMBOX1-204ENST00000517386 CHMP7Q8WUX9 453 aaPredicted RBP14.27□□□□□ -0.13
HMBOX1-204ENST00000517386 RNF216Q9NWF9 866 aaPredicted RBP14.22□□□□□ -0.13
HMBOX1-204ENST00000517386 GRIN2BQ13224 1484 aa14.19□□□□□ -0.14
HMBOX1-204ENST00000517386 PPP4R3CPQ6ZMV5 832 aa14.18□□□□□ -0.14
HMBOX1-204ENST00000517386 CLASP1Q7Z460 1538 aa14.17□□□□□ -0.14
HMBOX1-204ENST00000517386 MAGI1Q96QZ7 1491 aaPredicted RBP14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms