RNA–Protein interactions for RNA: ENST00000457199.6

CHORDC1-202, Transcript of cysteine and histidine rich domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene CHORDC1, Length 2,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHORDC1-202ENST00000457199 NISCHQ9Y2I1 1504 aa22.94■■□□□ 1.26
CHORDC1-202ENST00000457199 CCDC180Q9P1Z9 1646 aa19.99■□□□□ 0.79
CHORDC1-202ENST00000457199 ZCCHC6Q5VYS8 1495 aaKnown RBP19.24■□□□□ 0.67
CHORDC1-202ENST00000457199 DCAF8L2P0C7V8 631 aa19.12■□□□□ 0.65
CHORDC1-202ENST00000457199 ABCC9O60706 1549 aa19.06■□□□□ 0.64
CHORDC1-202ENST00000457199 DCAF1Q9Y4B6 1507 aa18.91■□□□□ 0.62
CHORDC1-202ENST00000457199 SHROOM4Q9ULL8 1493 aa18.79■□□□□ 0.6
CHORDC1-202ENST00000457199 MYO15BQ96JP2 1530 aa18.7■□□□□ 0.58
CHORDC1-202ENST00000457199 NACADO15069 1562 aa18.64■□□□□ 0.58
CHORDC1-202ENST00000457199 RB1CC1Q8TDY2 1594 aa18.52■□□□□ 0.55
CHORDC1-202ENST00000457199 SCRIBQ14160 1630 aa18.46■□□□□ 0.55
CHORDC1-202ENST00000457199 UNC13AQ9UPW8 1703 aa18.2■□□□□ 0.5
CHORDC1-202ENST00000457199 SUPT5HO00267 1087 aaKnown RBP18.06■□□□□ 0.48
CHORDC1-202ENST00000457199 PABPN1Q86U42 306 aaKnown RBP eCLIP18■□□□□ 0.47
CHORDC1-202ENST00000457199 BICRAQ9NZM4 1560 aa17.98■□□□□ 0.47
CHORDC1-202ENST00000457199 CECR2Q9BXF3 1484 aa17.88■□□□□ 0.45
CHORDC1-202ENST00000457199 RSF1Q96T23 1441 aaPredicted RBP17.8■□□□□ 0.44
CHORDC1-202ENST00000457199 MROH2BQ7Z745 1585 aa17.75■□□□□ 0.43
CHORDC1-202ENST00000457199 BAZ1AQ9NRL2 1556 aaPredicted RBP17.71■□□□□ 0.43
CHORDC1-202ENST00000457199 SMARCA4P51532 1647 aa17.65■□□□□ 0.42
CHORDC1-202ENST00000457199 WIZO95785 1651 aa17.62■□□□□ 0.41
CHORDC1-202ENST00000457199 EIF4G1Q04637 1599 aaKnown RBP17.45■□□□□ 0.38
CHORDC1-202ENST00000457199 PEG3Q9GZU2 1588 aa17.41■□□□□ 0.38
CHORDC1-202ENST00000457199 ATAD2BQ9ULI0 1458 aa17.38■□□□□ 0.37
CHORDC1-202ENST00000457199 AEBP2Q6ZN18 517 aaPredicted RBP17.38■□□□□ 0.37
CHORDC1-202ENST00000457199 TOP2AP11388 1531 aaKnown RBP17.38■□□□□ 0.37
CHORDC1-202ENST00000457199 SMARCA2P51531 1590 aa17.35■□□□□ 0.37
CHORDC1-202ENST00000457199 BAZ1BQ9UIG0 1483 aaKnown RBP17.29■□□□□ 0.36
CHORDC1-202ENST00000457199 CCDC88BA6NC98 1476 aa17.24■□□□□ 0.35
CHORDC1-202ENST00000457199 CC2D2AQ9P2K1 1620 aa17.22■□□□□ 0.35
CHORDC1-202ENST00000457199 NCAPD3P42695 1498 aa17.22■□□□□ 0.35
CHORDC1-202ENST00000457199 CHIC1Q5VXU3 224 aa17.2■□□□□ 0.34
CHORDC1-202ENST00000457199 HMGXB3Q12766 1538 aa17.18■□□□□ 0.34
CHORDC1-202ENST00000457199 TRIM41Q8WV44 630 aa16.94■□□□□ 0.3
CHORDC1-202ENST00000457199 DNAJC5BQ9UF47 199 aa16.9■□□□□ 0.3
CHORDC1-202ENST00000457199 ABCC8Q09428 1581 aa16.89■□□□□ 0.29
CHORDC1-202ENST00000457199 CFTRP13569 1480 aa16.84■□□□□ 0.29
CHORDC1-202ENST00000457199 CADPSQ9ULU8 1353 aa16.8■□□□□ 0.28
CHORDC1-202ENST00000457199 WRNQ14191 1432 aaPredicted RBP eCLIP16.75■□□□□ 0.27
CHORDC1-202ENST00000457199 PRDM2Q13029 1718 aa16.74■□□□□ 0.27
CHORDC1-202ENST00000457199 NESP48681 1621 aa16.72■□□□□ 0.27
CHORDC1-202ENST00000457199 SYNJ1O43426 1573 aa16.69■□□□□ 0.26
CHORDC1-202ENST00000457199 FAM9AQ8IZU1 332 aaPredicted RBP16.69■□□□□ 0.26
CHORDC1-202ENST00000457199 LAMC3Q9Y6N6 1575 aa16.65■□□□□ 0.26
CHORDC1-202ENST00000457199 FANCD2Q9BXW9 1451 aa16.62■□□□□ 0.25
CHORDC1-202ENST00000457199 TOP2BQ02880 1626 aa16.6■□□□□ 0.25
CHORDC1-202ENST00000457199 LOC105371045A0A1W2PR82 267 aa16.6■□□□□ 0.25
CHORDC1-202ENST00000457199 CUX1P39880 1505 aa16.59■□□□□ 0.25
CHORDC1-202ENST00000457199 BIVM-ERCC5R4GMW8 1640 aa16.57■□□□□ 0.24
CHORDC1-202ENST00000457199 SOGA1O94964 1423 aa16.56■□□□□ 0.24
CHORDC1-202ENST00000457199 PDS5BQ9NTI5 1447 aa16.53■□□□□ 0.24
CHORDC1-202ENST00000457199 CEP164Q9UPV0 1460 aa16.52■□□□□ 0.23
CHORDC1-202ENST00000457199 RUSC2Q8N2Y8 1516 aa16.51■□□□□ 0.23
CHORDC1-202ENST00000457199 KIF21AQ7Z4S6 1674 aa16.51■□□□□ 0.23
CHORDC1-202ENST00000457199 EHMT2Q96KQ7 1210 aa16.5■□□□□ 0.23
CHORDC1-202ENST00000457199 DNMBPQ6XZF7 1577 aa16.43■□□□□ 0.22
CHORDC1-202ENST00000457199 TOPBP1Q92547 1522 aa16.43■□□□□ 0.22
CHORDC1-202ENST00000457199 EEA1Q15075 1411 aa16.43■□□□□ 0.22
CHORDC1-202ENST00000457199 FGD5Q6ZNL6 1462 aa16.43■□□□□ 0.22
CHORDC1-202ENST00000457199 CSRNP3Q8WYN3 585 aa16.42■□□□□ 0.22
CHORDC1-202ENST00000457199 URB2Q14146 1524 aaKnown RBP16.42■□□□□ 0.22
CHORDC1-202ENST00000457199 POLA1P09884 1462 aaPredicted RBP16.36■□□□□ 0.21
CHORDC1-202ENST00000457199 ERCC6Q03468 1493 aa16.34■□□□□ 0.21
CHORDC1-202ENST00000457199 RAD54L2Q9Y4B4 1467 aa16.33■□□□□ 0.2
CHORDC1-202ENST00000457199 KIF27Q86VH2 1401 aa16.33■□□□□ 0.2
CHORDC1-202ENST00000457199 CUX2O14529 1486 aa16.32■□□□□ 0.2
CHORDC1-202ENST00000457199 MRC2Q9UBG0 1479 aa16.31■□□□□ 0.2
CHORDC1-202ENST00000457199 UBTFP17480 764 aaKnown RBP16.25■□□□□ 0.19
CHORDC1-202ENST00000457199 ABCA10Q8WWZ4 1543 aa16.25■□□□□ 0.19
CHORDC1-202ENST00000457199 GOLGA3Q08378 1498 aa16.24■□□□□ 0.19
CHORDC1-202ENST00000457199 KIF21BO75037 1637 aa16.23■□□□□ 0.19
CHORDC1-202ENST00000457199 WDR62O43379 1518 aa16.22■□□□□ 0.19
CHORDC1-202ENST00000457199 RAPGEF2Q9Y4G8 1499 aa16.21■□□□□ 0.19
CHORDC1-202ENST00000457199 IGF1RP08069 1367 aa16.2■□□□□ 0.18
CHORDC1-202ENST00000457199 WDR97A6NE52 1622 aa16.2■□□□□ 0.18
CHORDC1-202ENST00000457199 THOC2Q8NI27 1593 aaKnown RBP16.2■□□□□ 0.18
CHORDC1-202ENST00000457199 PRXQ9BXM0 1461 aa16.19■□□□□ 0.18
CHORDC1-202ENST00000457199 TDRD9Q8NDG6 1382 aaKnown RBP16.19■□□□□ 0.18
CHORDC1-202ENST00000457199 TARBP1Q13395 1621 aaKnown RBP16.18■□□□□ 0.18
CHORDC1-202ENST00000457199 TNIKQ9UKE5 1360 aa16.17■□□□□ 0.18
CHORDC1-202ENST00000457199 ERICH3Q5RHP9 1530 aa16.13■□□□□ 0.17
CHORDC1-202ENST00000457199 CARMIL1Q5VZK9 1371 aa16.13■□□□□ 0.17
CHORDC1-202ENST00000457199 ABCA5Q8WWZ7 1642 aa16.12■□□□□ 0.17
CHORDC1-202ENST00000457199 GAPVD1Q14C86 1478 aa16.12■□□□□ 0.17
CHORDC1-202ENST00000457199 CEP162Q5TB80 1403 aa16.11■□□□□ 0.17
CHORDC1-202ENST00000457199 IFT140Q96RY7 1462 aa16.1■□□□□ 0.17
CHORDC1-202ENST00000457199 AQRO60306 1485 aaKnown RBP eCLIP16.09■□□□□ 0.172e-6■■■■□ 22.1
CHORDC1-202ENST00000457199 ZNF608Q9ULD9 1512 aaPredicted RBP16.07■□□□□ 0.16
CHORDC1-202ENST00000457199 RANGAP1P46060 587 aaPredicted RBP16.07■□□□□ 0.16
CHORDC1-202ENST00000457199 CUL7Q14999 1698 aa16.05■□□□□ 0.16
CHORDC1-202ENST00000457199 PBRM1Q86U86 1689 aa16.03■□□□□ 0.16
CHORDC1-202ENST00000457199 CLIP1P30622 1438 aa16■□□□□ 0.15
CHORDC1-202ENST00000457199 EIF4G3O43432 1585 aaKnown RBP15.99■□□□□ 0.15
CHORDC1-202ENST00000457199 GRIN2BQ13224 1484 aa15.98■□□□□ 0.15
CHORDC1-202ENST00000457199 FHAD1B1AJZ9 1412 aa15.93■□□□□ 0.14
CHORDC1-202ENST00000457199 ADAMTS12P58397 1594 aa15.91■□□□□ 0.14
CHORDC1-202ENST00000457199 SNAPC4Q5SXM2 1469 aa15.9■□□□□ 0.14
CHORDC1-202ENST00000457199 CTTNBP2Q8WZ74 1663 aa15.89■□□□□ 0.13
CHORDC1-202ENST00000457199 PPARGC1BQ86YN6 1023 aaKnown RBP15.86■□□□□ 0.13
CHORDC1-202ENST00000457199 ARHGAP35Q9NRY4 1499 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms