RNA–Protein interactions for RNA: ENST00000526422.2

NCAPD3-204, Transcript of non-SMC condensin II complex subunit D3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NCAPD3, Length 1,060 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3-204ENST00000526422 NISCHQ9Y2I1 1504 aa51.03■■■■■ 5.76
NCAPD3-204ENST00000526422 CCDC180Q9P1Z9 1646 aa45.58■■■■■ 4.89
NCAPD3-204ENST00000526422 ABCC9O60706 1549 aa45.32■■■■■ 4.85
NCAPD3-204ENST00000526422 RB1CC1Q8TDY2 1594 aa43.24■■■■■ 4.51
NCAPD3-204ENST00000526422 DCAF8L2P0C7V8 631 aa43.05■■■■■ 4.48
NCAPD3-204ENST00000526422 NACADO15069 1562 aa43.02■■■■■ 4.48
NCAPD3-204ENST00000526422 MYO15BQ96JP2 1530 aa42.51■■■■■ 4.39
NCAPD3-204ENST00000526422 ZCCHC6Q5VYS8 1495 aaKnown RBP42.36■■■■■ 4.37
NCAPD3-204ENST00000526422 PABPN1Q86U42 306 aaKnown RBP eCLIP42.3■■■■■ 4.36
NCAPD3-204ENST00000526422 UNC13AQ9UPW8 1703 aa42.29■■■■■ 4.36
NCAPD3-204ENST00000526422 DNAJC5BQ9UF47 199 aa42.21■■■■■ 4.35
NCAPD3-204ENST00000526422 DCAF1Q9Y4B6 1507 aa42.12■■■■■ 4.33
NCAPD3-204ENST00000526422 BICRAQ9NZM4 1560 aa41.98■■■■■ 4.31
NCAPD3-204ENST00000526422 SCRIBQ14160 1630 aa41.65■■■■■ 4.26
NCAPD3-204ENST00000526422 SHROOM4Q9ULL8 1493 aa41.36■■■■■ 4.21
NCAPD3-204ENST00000526422 CC2D2AQ9P2K1 1620 aa40.92■■■■■ 4.14
NCAPD3-204ENST00000526422 EIF4G1Q04637 1599 aaKnown RBP40.91■■■■■ 4.14
NCAPD3-204ENST00000526422 CECR2Q9BXF3 1484 aa40.75■■■■■ 4.11
NCAPD3-204ENST00000526422 NCAPD3P42695 1498 aa39.73■■■■□ 3.95
NCAPD3-204ENST00000526422 SMARCA4P51532 1647 aa39.73■■■■□ 3.95
NCAPD3-204ENST00000526422 ATAD2BQ9ULI0 1458 aa39.68■■■■□ 3.94
NCAPD3-204ENST00000526422 BAZ1AQ9NRL2 1556 aaPredicted RBP39.58■■■■□ 3.93
NCAPD3-204ENST00000526422 SMARCA2P51531 1590 aa39.56■■■■□ 3.92
NCAPD3-204ENST00000526422 HMGXB3Q12766 1538 aa39.44■■■■□ 3.9
NCAPD3-204ENST00000526422 MROH2BQ7Z745 1585 aa39.36■■■■□ 3.89
NCAPD3-204ENST00000526422 BAZ1BQ9UIG0 1483 aaKnown RBP39.32■■■■□ 3.89
NCAPD3-204ENST00000526422 PEG3Q9GZU2 1588 aa39.29■■■■□ 3.88
NCAPD3-204ENST00000526422 ERCC6Q03468 1493 aa39.08■■■■□ 3.85
NCAPD3-204ENST00000526422 NESP48681 1621 aa39.04■■■■□ 3.84
NCAPD3-204ENST00000526422 WIZO95785 1651 aa38.91■■■■□ 3.82
NCAPD3-204ENST00000526422 CUX2O14529 1486 aa38.83■■■■□ 3.81
NCAPD3-204ENST00000526422 LAMC3Q9Y6N6 1575 aa38.76■■■■□ 3.8
NCAPD3-204ENST00000526422 RSF1Q96T23 1441 aaPredicted RBP38.68■■■■□ 3.78
NCAPD3-204ENST00000526422 CADPSQ9ULU8 1353 aa38.56■■■■□ 3.76
NCAPD3-204ENST00000526422 PDS5BQ9NTI5 1447 aa38.55■■■■□ 3.76
NCAPD3-204ENST00000526422 KIF21AQ7Z4S6 1674 aa38.52■■■■□ 3.76
NCAPD3-204ENST00000526422 THOC2Q8NI27 1593 aaKnown RBP38.5■■■■□ 3.75
NCAPD3-204ENST00000526422 DNAJC5Q9H3Z4 198 aa38.44■■■■□ 3.74
NCAPD3-204ENST00000526422 TOP2AP11388 1531 aaKnown RBP38.41■■■■□ 3.74
NCAPD3-204ENST00000526422 MRC2Q9UBG0 1479 aa38.19■■■■□ 3.7
NCAPD3-204ENST00000526422 CFTRP13569 1480 aa38.18■■■■□ 3.7
NCAPD3-204ENST00000526422 FANCD2Q9BXW9 1451 aa38.13■■■■□ 3.69
NCAPD3-204ENST00000526422 CEP164Q9UPV0 1460 aa38.13■■■■□ 3.69
NCAPD3-204ENST00000526422 WDR62O43379 1518 aa38.07■■■■□ 3.68
NCAPD3-204ENST00000526422 CCDC88BA6NC98 1476 aa38.01■■■■□ 3.67
NCAPD3-204ENST00000526422 PRDM2Q13029 1718 aa37.81■■■■□ 3.64
NCAPD3-204ENST00000526422 URB2Q14146 1524 aaKnown RBP37.8■■■■□ 3.64
NCAPD3-204ENST00000526422 TOPBP1Q92547 1522 aa37.45■■■■□ 3.59
NCAPD3-204ENST00000526422 ABCC8Q09428 1581 aa37.35■■■■□ 3.57
NCAPD3-204ENST00000526422 SUPT5HO00267 1087 aaKnown RBP37.35■■■■□ 3.57
NCAPD3-204ENST00000526422 IFT140Q96RY7 1462 aa37.33■■■■□ 3.57
NCAPD3-204ENST00000526422 DNMBPQ6XZF7 1577 aa37.32■■■■□ 3.56
NCAPD3-204ENST00000526422 ZNF608Q9ULD9 1512 aaPredicted RBP37.28■■■■□ 3.56
NCAPD3-204ENST00000526422 OSCARQ8IYS5 282 aa37.19■■■■□ 3.54
NCAPD3-204ENST00000526422 POLA1P09884 1462 aaPredicted RBP37.08■■■■□ 3.53
NCAPD3-204ENST00000526422 TARBP1Q13395 1621 aaKnown RBP37.07■■■■□ 3.53
NCAPD3-204ENST00000526422 EIF4G3O43432 1585 aaKnown RBP37.06■■■■□ 3.52
NCAPD3-204ENST00000526422 AQRO60306 1485 aaKnown RBP eCLIP37.01■■■■□ 3.51
NCAPD3-204ENST00000526422 TRIM41Q8WV44 630 aa36.98■■■■□ 3.51
NCAPD3-204ENST00000526422 RAD54L2Q9Y4B4 1467 aa36.98■■■■□ 3.51
NCAPD3-204ENST00000526422 CUX1P39880 1505 aa36.95■■■■□ 3.51
NCAPD3-204ENST00000526422 SOGA1O94964 1423 aa36.95■■■■□ 3.51
NCAPD3-204ENST00000526422 FGD5Q6ZNL6 1462 aa36.92■■■■□ 3.5
NCAPD3-204ENST00000526422 TDRD9Q8NDG6 1382 aaKnown RBP36.86■■■■□ 3.49
NCAPD3-204ENST00000526422 CHD1O14646 1710 aa36.73■■■■□ 3.47
NCAPD3-204ENST00000526422 FBLN2P98095 1184 aa36.73■■■■□ 3.47
NCAPD3-204ENST00000526422 WDR97A6NE52 1622 aa36.66■■■■□ 3.46
NCAPD3-204ENST00000526422 RIMBP3CA6NJZ7 1639 aa36.64■■■■□ 3.46
NCAPD3-204ENST00000526422 RIMBP3BA6NNM3 1639 aa36.64■■■■□ 3.46
NCAPD3-204ENST00000526422 RIMBP3Q9UFD9 1639 aa36.64■■■■□ 3.46
NCAPD3-204ENST00000526422 SNAPC4Q5SXM2 1469 aa36.62■■■■□ 3.45
NCAPD3-204ENST00000526422 GRIN2BQ13224 1484 aa36.56■■■■□ 3.44
NCAPD3-204ENST00000526422 ARHGEF11O15085 1522 aa36.55■■■■□ 3.44
NCAPD3-204ENST00000526422 MAGI1Q96QZ7 1491 aaPredicted RBP36.5■■■■□ 3.43
NCAPD3-204ENST00000526422 GAPVD1Q14C86 1478 aa36.5■■■■□ 3.43
NCAPD3-204ENST00000526422 ABCA10Q8WWZ4 1543 aa36.49■■■■□ 3.43
NCAPD3-204ENST00000526422 CHMP7Q8WUX9 453 aaPredicted RBP36.49■■■■□ 3.43
NCAPD3-204ENST00000526422 WRNQ14191 1432 aaPredicted RBP eCLIP36.48■■■■□ 3.43
NCAPD3-204ENST00000526422 PBRM1Q86U86 1689 aa36.44■■■■□ 3.42
NCAPD3-204ENST00000526422 TOP2BQ02880 1626 aa36.44■■■■□ 3.42
NCAPD3-204ENST00000526422 SYNJ1O43426 1573 aa36.44■■■■□ 3.42
NCAPD3-204ENST00000526422 BIVM-ERCC5R4GMW8 1640 aa36.42■■■■□ 3.42
NCAPD3-204ENST00000526422 ABCA5Q8WWZ7 1642 aa36.4■■■■□ 3.42
NCAPD3-204ENST00000526422 SYNJ2O15056 1496 aa36.39■■■■□ 3.42
NCAPD3-204ENST00000526422 CYB5RLQ6IPT4 315 aa36.33■■■■□ 3.41
NCAPD3-204ENST00000526422 CLASP1Q7Z460 1538 aa36.29■■■■□ 3.4
NCAPD3-204ENST00000526422 ARAP1Q96P48 1450 aa36.24■■■■□ 3.39
NCAPD3-204ENST00000526422 ADAMTS12P58397 1594 aa36.1■■■■□ 3.37
NCAPD3-204ENST00000526422 GRIN2AQ12879 1464 aa36.09■■■■□ 3.37
NCAPD3-204ENST00000526422 FHAD1B1AJZ9 1412 aa36.04■■■■□ 3.36
NCAPD3-204ENST00000526422 ERICH3Q5RHP9 1530 aa36.03■■■■□ 3.36
NCAPD3-204ENST00000526422 CEP170Q5SW79 1584 aa35.95■■■■□ 3.35
NCAPD3-204ENST00000526422 NUP160Q12769 1436 aa35.94■■■■□ 3.34
NCAPD3-204ENST00000526422 TRHP20396 242 aaPredicted RBP35.82■■■■□ 3.32
NCAPD3-204ENST00000526422 ERCC6L2Q5T890 1561 aa35.81■■■■□ 3.32
NCAPD3-204ENST00000526422 KIF27Q86VH2 1401 aa35.75■■■■□ 3.31
NCAPD3-204ENST00000526422 SHROOM2Q13796 1616 aa35.72■■■■□ 3.31
NCAPD3-204ENST00000526422 IGF1RP08069 1367 aa35.72■■■■□ 3.31
NCAPD3-204ENST00000526422 JPH4Q96JJ6 628 aa35.64■■■■□ 3.3
NCAPD3-204ENST00000526422 PRG4Q92954 1404 aaPredicted RBP35.6■■■■□ 3.29
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms