RNA–Protein interactions for RNA: ENST00000533739.1

CHORDC1-210, Transcript of cysteine and histidine rich domain containing 1, humanhuman

TSL 2

Gene CHORDC1, Length 582 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHORDC1-210ENST00000533739 NISCHQ9Y2I1 1504 aa19.75■□□□□ 0.75
CHORDC1-210ENST00000533739 AEBP2Q6ZN18 517 aaPredicted RBP19.05■□□□□ 0.64
CHORDC1-210ENST00000533739 CHIC1Q5VXU3 224 aa18.21■□□□□ 0.51
CHORDC1-210ENST00000533739 CCDC180Q9P1Z9 1646 aa17.69■□□□□ 0.42
CHORDC1-210ENST00000533739 ABCC9O60706 1549 aa17.45■□□□□ 0.38
CHORDC1-210ENST00000533739 RB1CC1Q8TDY2 1594 aa16.73■□□□□ 0.27
CHORDC1-210ENST00000533739 NACADO15069 1562 aa16.64■□□□□ 0.25
CHORDC1-210ENST00000533739 DCAF8L2P0C7V8 631 aa16.55■□□□□ 0.24
CHORDC1-210ENST00000533739 MYO15BQ96JP2 1530 aa16.46■□□□□ 0.23
CHORDC1-210ENST00000533739 ZCCHC6Q5VYS8 1495 aaKnown RBP16.44■□□□□ 0.22
CHORDC1-210ENST00000533739 DCAF1Q9Y4B6 1507 aa16.34■□□□□ 0.21
CHORDC1-210ENST00000533739 UNC13AQ9UPW8 1703 aa16.31■□□□□ 0.2
CHORDC1-210ENST00000533739 SENP3Q9H4L4 574 aaPredicted RBP16.27■□□□□ 0.2
CHORDC1-210ENST00000533739 PABPN1Q86U42 306 aaKnown RBP eCLIP16.22■□□□□ 0.19
CHORDC1-210ENST00000533739 BICRAQ9NZM4 1560 aa16.16■□□□□ 0.18
CHORDC1-210ENST00000533739 SCRIBQ14160 1630 aa16.14■□□□□ 0.17
CHORDC1-210ENST00000533739 PHF23Q9BUL5 403 aaPredicted RBP16.09■□□□□ 0.17
CHORDC1-210ENST00000533739 SHROOM4Q9ULL8 1493 aa16.06■□□□□ 0.16
CHORDC1-210ENST00000533739 DNAJC5BQ9UF47 199 aa16.02■□□□□ 0.16
CHORDC1-210ENST00000533739 EIF4G1Q04637 1599 aaKnown RBP15.8■□□□□ 0.12
CHORDC1-210ENST00000533739 CC2D2AQ9P2K1 1620 aa15.77■□□□□ 0.12
CHORDC1-210ENST00000533739 CECR2Q9BXF3 1484 aa15.7■□□□□ 0.1
CHORDC1-210ENST00000533739 SMARCA4P51532 1647 aa15.39■□□□□ 0.05
CHORDC1-210ENST00000533739 BAZ1AQ9NRL2 1556 aaPredicted RBP15.36■□□□□ 0.05
CHORDC1-210ENST00000533739 SMARCA2P51531 1590 aa15.33■□□□□ 0.05
CHORDC1-210ENST00000533739 ATAD2BQ9ULI0 1458 aa15.32■□□□□ 0.04
CHORDC1-210ENST00000533739 NCAPD3P42695 1498 aa15.31■□□□□ 0.04
CHORDC1-210ENST00000533739 HMGXB3Q12766 1538 aa15.29■□□□□ 0.04
CHORDC1-210ENST00000533739 BAZ1BQ9UIG0 1483 aaKnown RBP15.24■□□□□ 0.03
CHORDC1-210ENST00000533739 PEG3Q9GZU2 1588 aa15.22■□□□□ 0.03
CHORDC1-210ENST00000533739 MROH2BQ7Z745 1585 aa15.21■□□□□ 0.03
CHORDC1-210ENST00000533739 FOXD1Q16676 465 aa15.13■□□□□ 0.01
CHORDC1-210ENST00000533739 ERCC6Q03468 1493 aa15.1■□□□□ 0.01
CHORDC1-210ENST00000533739 WIZO95785 1651 aa15.05■□□□□ -0
CHORDC1-210ENST00000533739 NESP48681 1621 aa15.02□□□□□ -0.01
CHORDC1-210ENST00000533739 LAMC3Q9Y6N6 1575 aa15□□□□□ -0.01
CHORDC1-210ENST00000533739 CUX2O14529 1486 aa14.96□□□□□ -0.01
CHORDC1-210ENST00000533739 RSF1Q96T23 1441 aaPredicted RBP14.96□□□□□ -0.01
CHORDC1-210ENST00000533739 TOP2AP11388 1531 aaKnown RBP14.92□□□□□ -0.02
CHORDC1-210ENST00000533739 PDS5BQ9NTI5 1447 aa14.89□□□□□ -0.03
CHORDC1-210ENST00000533739 THOC2Q8NI27 1593 aaKnown RBP14.88□□□□□ -0.03
CHORDC1-210ENST00000533739 KIF21AQ7Z4S6 1674 aa14.87□□□□□ -0.03
CHORDC1-210ENST00000533739 CADPSQ9ULU8 1353 aa14.86□□□□□ -0.03
CHORDC1-210ENST00000533739 POTEDQ86YR6 584 aa14.78□□□□□ -0.04
CHORDC1-210ENST00000533739 MRC2Q9UBG0 1479 aa14.77□□□□□ -0.04
CHORDC1-210ENST00000533739 CEP164Q9UPV0 1460 aa14.77□□□□□ -0.04
CHORDC1-210ENST00000533739 CFTRP13569 1480 aa14.75□□□□□ -0.05
CHORDC1-210ENST00000533739 FANCD2Q9BXW9 1451 aa14.75□□□□□ -0.05
CHORDC1-210ENST00000533739 WDR62O43379 1518 aa14.72□□□□□ -0.05
CHORDC1-210ENST00000533739 PRDM2Q13029 1718 aa14.69□□□□□ -0.06
CHORDC1-210ENST00000533739 CCDC88BA6NC98 1476 aa14.69□□□□□ -0.06
CHORDC1-210ENST00000533739 PLPPR3Q6T4P5 718 aa14.62□□□□□ -0.07
CHORDC1-210ENST00000533739 DNAJC5Q9H3Z4 198 aa14.6□□□□□ -0.07
CHORDC1-210ENST00000533739 URB2Q14146 1524 aaKnown RBP14.58□□□□□ -0.08
CHORDC1-210ENST00000533739 DNMBPQ6XZF7 1577 aa14.47□□□□□ -0.09
CHORDC1-210ENST00000533739 TOPBP1Q92547 1522 aa14.47□□□□□ -0.09
CHORDC1-210ENST00000533739 ABCC8Q09428 1581 aa14.47□□□□□ -0.09
CHORDC1-210ENST00000533739 SUPT5HO00267 1087 aaKnown RBP14.46□□□□□ -0.09
CHORDC1-210ENST00000533739 IFT140Q96RY7 1462 aa14.44□□□□□ -0.1
CHORDC1-210ENST00000533739 EIF4G3O43432 1585 aaKnown RBP14.37□□□□□ -0.11
CHORDC1-210ENST00000533739 ZNF608Q9ULD9 1512 aaPredicted RBP14.36□□□□□ -0.11
CHORDC1-210ENST00000533739 POLA1P09884 1462 aaPredicted RBP14.34□□□□□ -0.11
CHORDC1-210ENST00000533739 TARBP1Q13395 1621 aaKnown RBP14.32□□□□□ -0.12
CHORDC1-210ENST00000533739 FGD5Q6ZNL6 1462 aa14.3□□□□□ -0.12
CHORDC1-210ENST00000533739 CUX1P39880 1505 aa14.3□□□□□ -0.12
CHORDC1-210ENST00000533739 RAD54L2Q9Y4B4 1467 aa14.26□□□□□ -0.13
CHORDC1-210ENST00000533739 SOGA1O94964 1423 aa14.25□□□□□ -0.13
CHORDC1-210ENST00000533739 WDR97A6NE52 1622 aa14.25□□□□□ -0.13
CHORDC1-210ENST00000533739 AQRO60306 1485 aaKnown RBP eCLIP14.25□□□□□ -0.137e-7■■□□□ 13.9
CHORDC1-210ENST00000533739 OSCARQ8IYS5 282 aa14.24□□□□□ -0.13
CHORDC1-210ENST00000533739 PPP6R1Q9UPN7 881 aa14.23□□□□□ -0.13
CHORDC1-210ENST00000533739 ADRA2BP18089 450 aa14.21□□□□□ -0.13
CHORDC1-210ENST00000533739 TDRD9Q8NDG6 1382 aaKnown RBP14.2□□□□□ -0.14
CHORDC1-210ENST00000533739 CHD1O14646 1710 aa14.19□□□□□ -0.14
CHORDC1-210ENST00000533739 PIAS4Q8N2W9 510 aaPredicted RBP14.18□□□□□ -0.14
CHORDC1-210ENST00000533739 SNAPC4Q5SXM2 1469 aa14.17□□□□□ -0.14
CHORDC1-210ENST00000533739 WRNQ14191 1432 aaPredicted RBP eCLIP14.15□□□□□ -0.14
CHORDC1-210ENST00000533739 BIVM-ERCC5R4GMW8 1640 aa14.15□□□□□ -0.14
CHORDC1-210ENST00000533739 MSH5O43196 834 aa14.15□□□□□ -0.14
CHORDC1-210ENST00000533739 TOP2BQ02880 1626 aa14.15□□□□□ -0.14
CHORDC1-210ENST00000533739 GRIN2BQ13224 1484 aa14.14□□□□□ -0.15
CHORDC1-210ENST00000533739 MAGI1Q96QZ7 1491 aaPredicted RBP14.14□□□□□ -0.15
CHORDC1-210ENST00000533739 FBLN2P98095 1184 aa14.14□□□□□ -0.15
CHORDC1-210ENST00000533739 TRIM41Q8WV44 630 aa14.14□□□□□ -0.15
CHORDC1-210ENST00000533739 PBRM1Q86U86 1689 aa14.14□□□□□ -0.15
CHORDC1-210ENST00000533739 SYNJ1O43426 1573 aa14.13□□□□□ -0.15
CHORDC1-210ENST00000533739 ABCA10Q8WWZ4 1543 aa14.13□□□□□ -0.15
CHORDC1-210ENST00000533739 ABCA5Q8WWZ7 1642 aa14.12□□□□□ -0.15
CHORDC1-210ENST00000533739 GAPVD1Q14C86 1478 aa14.11□□□□□ -0.15
CHORDC1-210ENST00000533739 RIMBP3CA6NJZ7 1639 aa14.1□□□□□ -0.15
CHORDC1-210ENST00000533739 RIMBP3BA6NNM3 1639 aa14.1□□□□□ -0.15
CHORDC1-210ENST00000533739 RIMBP3Q9UFD9 1639 aa14.1□□□□□ -0.15
CHORDC1-210ENST00000533739 ARHGEF11O15085 1522 aa14.09□□□□□ -0.15
CHORDC1-210ENST00000533739 SYNJ2O15056 1496 aa14.07□□□□□ -0.16
CHORDC1-210ENST00000533739 CHMP7Q8WUX9 453 aaPredicted RBP14.05□□□□□ -0.16
CHORDC1-210ENST00000533739 ADAMTS12P58397 1594 aa14.02□□□□□ -0.16
CHORDC1-210ENST00000533739 CLASP1Q7Z460 1538 aa14.02□□□□□ -0.16
CHORDC1-210ENST00000533739 ERICH3Q5RHP9 1530 aa13.98□□□□□ -0.17
CHORDC1-210ENST00000533739 GRIN2AQ12879 1464 aa13.97□□□□□ -0.17
CHORDC1-210ENST00000533739 FHAD1B1AJZ9 1412 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms