RNA–Protein interactions for RNA: ENST00000488370.1

ABCB8-215, Transcript of ATP binding cassette subfamily B member 8, human

TSL 3

Gene ABCB8, Length 606 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCB8-215	ENST00000488370	NISCH	Q9Y2I1	1504 aa		41.18	■■■■■ 4.18
ABCB8-215	ENST00000488370	CCDC180	Q9P1Z9	1646 aa		36.67	■■■■□ 3.46
ABCB8-215	ENST00000488370	ABCC9	O60706	1549 aa		36.08	■■■■□ 3.37
ABCB8-215	ENST00000488370	DCAF8L2	P0C7V8	631 aa		34.66	■■■■□ 3.14
ABCB8-215	ENST00000488370	RB1CC1	Q8TDY2	1594 aa		34.6	■■■■□ 3.13
ABCB8-215	ENST00000488370	NACAD	O15069	1562 aa		34.49	■■■■□ 3.11
ABCB8-215	ENST00000488370	ZCCHC6	Q5VYS8	1495 aa	Known RBP	34.28	■■■■□ 3.08
ABCB8-215	ENST00000488370	MYO15B	Q96JP2	1530 aa		34.14	■■■■□ 3.06
ABCB8-215	ENST00000488370	DCAF1	Q9Y4B6	1507 aa		33.99	■■■■□ 3.03
ABCB8-215	ENST00000488370	UNC13A	Q9UPW8	1703 aa		33.85	■■■■□ 3.01
ABCB8-215	ENST00000488370	PABPN1	Q86U42	306 aa	Known RBP eCLIP	33.71	■■■□□ 2.99
ABCB8-215	ENST00000488370	SCRIB	Q14160	1630 aa		33.57	■■■□□ 2.97
ABCB8-215	ENST00000488370	BICRA	Q9NZM4	1560 aa		33.51	■■■□□ 2.96
ABCB8-215	ENST00000488370	DNAJC5B	Q9UF47	199 aa		33.13	■■■□□ 2.89
ABCB8-215	ENST00000488370	SHROOM4	Q9ULL8	1493 aa		33.08	■■■□□ 2.89
ABCB8-215	ENST00000488370	EIF4G1	Q04637	1599 aa	Known RBP	32.68	■■■□□ 2.82
ABCB8-215	ENST00000488370	CC2D2A	Q9P2K1	1620 aa		32.6	■■■□□ 2.81
ABCB8-215	ENST00000488370	CECR2	Q9BXF3	1484 aa		32.4	■■■□□ 2.78
ABCB8-215	ENST00000488370	SMARCA4	P51532	1647 aa		32.02	■■■□□ 2.72
ABCB8-215	ENST00000488370	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	31.95	■■■□□ 2.71
ABCB8-215	ENST00000488370	ATAD2B	Q9ULI0	1458 aa		31.84	■■■□□ 2.69
ABCB8-215	ENST00000488370	SMARCA2	P51531	1590 aa		31.81	■■■□□ 2.68
ABCB8-215	ENST00000488370	NCAPD3	P42695	1498 aa		31.78	■■■□□ 2.68
ABCB8-215	ENST00000488370	MROH2B	Q7Z745	1585 aa		31.77	■■■□□ 2.68
ABCB8-215	ENST00000488370	HMGXB3	Q12766	1538 aa		31.65	■■■□□ 2.66
ABCB8-215	ENST00000488370	BAZ1B	Q9UIG0	1483 aa	Known RBP	31.64	■■■□□ 2.66
ABCB8-215	ENST00000488370	PEG3	Q9GZU2	1588 aa		31.61	■■■□□ 2.65
ABCB8-215	ENST00000488370	WIZ	O95785	1651 aa		31.48	■■■□□ 2.63
ABCB8-215	ENST00000488370	RSF1	Q96T23	1441 aa	Predicted RBP	31.34	■■■□□ 2.61
ABCB8-215	ENST00000488370	NES	P48681	1621 aa		31.18	■■■□□ 2.58
ABCB8-215	ENST00000488370	ERCC6	Q03468	1493 aa		31.14	■■■□□ 2.58
ABCB8-215	ENST00000488370	TOP2A	P11388	1531 aa	Known RBP	31.08	■■■□□ 2.57
ABCB8-215	ENST00000488370	LAMC3	Q9Y6N6	1575 aa		31.02	■■■□□ 2.56
ABCB8-215	ENST00000488370	CADPS	Q9ULU8	1353 aa		30.9	■■■□□ 2.54
ABCB8-215	ENST00000488370	PDS5B	Q9NTI5	1447 aa		30.83	■■■□□ 2.53
ABCB8-215	ENST00000488370	KIF21A	Q7Z4S6	1674 aa		30.83	■■■□□ 2.53
ABCB8-215	ENST00000488370	CUX2	O14529	1486 aa		30.73	■■■□□ 2.51
ABCB8-215	ENST00000488370	CCDC88B	A6NC98	1476 aa		30.71	■■■□□ 2.51
ABCB8-215	ENST00000488370	THOC2	Q8NI27	1593 aa	Known RBP	30.69	■■■□□ 2.5
ABCB8-215	ENST00000488370	CFTR	P13569	1480 aa		30.67	■■■□□ 2.5
ABCB8-215	ENST00000488370	SUPT5H	O00267	1087 aa	Known RBP	30.64	■■■□□ 2.5
ABCB8-215	ENST00000488370	FANCD2	Q9BXW9	1451 aa		30.6	■■■□□ 2.49
ABCB8-215	ENST00000488370	CEP164	Q9UPV0	1460 aa		30.58	■■■□□ 2.49
ABCB8-215	ENST00000488370	MRC2	Q9UBG0	1479 aa		30.54	■■■□□ 2.48
ABCB8-215	ENST00000488370	PRDM2	Q13029	1718 aa		30.52	■■■□□ 2.48
ABCB8-215	ENST00000488370	WDR62	O43379	1518 aa		30.42	■■■□□ 2.46
ABCB8-215	ENST00000488370	URB2	Q14146	1524 aa	Known RBP	30.28	■■■□□ 2.44
ABCB8-215	ENST00000488370	TOPBP1	Q92547	1522 aa		30.08	■■■□□ 2.41
ABCB8-215	ENST00000488370	DNMBP	Q6XZF7	1577 aa		30.04	■■■□□ 2.4
ABCB8-215	ENST00000488370	ABCC8	Q09428	1581 aa		30.03	■■■□□ 2.4
ABCB8-215	ENST00000488370	DNAJC5	Q9H3Z4	198 aa		29.91	■■■□□ 2.38
ABCB8-215	ENST00000488370	IFT140	Q96RY7	1462 aa		29.9	■■■□□ 2.38
ABCB8-215	ENST00000488370	CUX1	P39880	1505 aa		29.82	■■■□□ 2.36
ABCB8-215	ENST00000488370	ZNF608	Q9ULD9	1512 aa	Predicted RBP	29.81	■■■□□ 2.36
ABCB8-215	ENST00000488370	POLA1	P09884	1462 aa	Predicted RBP	29.81	■■■□□ 2.36
ABCB8-215	ENST00000488370	FGD5	Q6ZNL6	1462 aa		29.76	■■■□□ 2.35
ABCB8-215	ENST00000488370	TARBP1	Q13395	1621 aa	Known RBP	29.74	■■■□□ 2.35
ABCB8-215	ENST00000488370	RAD54L2	Q9Y4B4	1467 aa		29.73	■■■□□ 2.35
ABCB8-215	ENST00000488370	EIF4G3	O43432	1585 aa	Known RBP	29.72	■■■□□ 2.35
ABCB8-215	ENST00000488370	SOGA1	O94964	1423 aa		29.71	■■■□□ 2.35
ABCB8-215	ENST00000488370	AQR	O60306	1485 aa	Known RBP eCLIP	29.63	■■■□□ 2.33	5e-7	■■■■■ 28.2
ABCB8-215	ENST00000488370	WRN	Q14191	1432 aa	Predicted RBP eCLIP	29.6	■■■□□ 2.33
ABCB8-215	ENST00000488370	TDRD9	Q8NDG6	1382 aa	Known RBP	29.58	■■■□□ 2.33
ABCB8-215	ENST00000488370	SYNJ1	O43426	1573 aa		29.55	■■■□□ 2.32
ABCB8-215	ENST00000488370	TOP2B	Q02880	1626 aa		29.53	■■■□□ 2.32
ABCB8-215	ENST00000488370	BIVM-ERCC5	R4GMW8	1640 aa		29.53	■■■□□ 2.32
ABCB8-215	ENST00000488370	WDR97	A6NE52	1622 aa		29.49	■■■□□ 2.31
ABCB8-215	ENST00000488370	OSCAR	Q8IYS5	282 aa		29.48	■■■□□ 2.31
ABCB8-215	ENST00000488370	FBLN2	P98095	1184 aa		29.41	■■■□□ 2.3
ABCB8-215	ENST00000488370	ABCA10	Q8WWZ4	1543 aa		29.4	■■■□□ 2.3
ABCB8-215	ENST00000488370	CHD1	O14646	1710 aa		29.4	■■■□□ 2.3
ABCB8-215	ENST00000488370	SNAPC4	Q5SXM2	1469 aa		29.38	■■■□□ 2.29
ABCB8-215	ENST00000488370	GRIN2B	Q13224	1484 aa		29.36	■■■□□ 2.29
ABCB8-215	ENST00000488370	GAPVD1	Q14C86	1478 aa		29.36	■■■□□ 2.29
ABCB8-215	ENST00000488370	PBRM1	Q86U86	1689 aa		29.36	■■■□□ 2.29
ABCB8-215	ENST00000488370	ABCA5	Q8WWZ7	1642 aa		29.32	■■■□□ 2.28
ABCB8-215	ENST00000488370	MAGI1	Q96QZ7	1491 aa	Predicted RBP	29.28	■■■□□ 2.28
ABCB8-215	ENST00000488370	CHMP7	Q8WUX9	453 aa	Predicted RBP	29.24	■■■□□ 2.27
ABCB8-215	ENST00000488370	SYNJ2	O15056	1496 aa		29.18	■■■□□ 2.26
ABCB8-215	ENST00000488370	ADAMTS12	P58397	1594 aa		29.08	■■■□□ 2.25
ABCB8-215	ENST00000488370	TRIM41	Q8WV44	630 aa		29.07	■■■□□ 2.24
ABCB8-215	ENST00000488370	ERICH3	Q5RHP9	1530 aa		29.06	■■■□□ 2.24
ABCB8-215	ENST00000488370	RIMBP3C	A6NJZ7	1639 aa		29.05	■■■□□ 2.24
ABCB8-215	ENST00000488370	RIMBP3B	A6NNM3	1639 aa		29.05	■■■□□ 2.24
ABCB8-215	ENST00000488370	RIMBP3	Q9UFD9	1639 aa		29.05	■■■□□ 2.24
ABCB8-215	ENST00000488370	ARHGEF11	O15085	1522 aa		29.02	■■■□□ 2.24
ABCB8-215	ENST00000488370	FHAD1	B1AJZ9	1412 aa		29	■■■□□ 2.23
ABCB8-215	ENST00000488370	KIF27	Q86VH2	1401 aa		28.99	■■■□□ 2.23
ABCB8-215	ENST00000488370	GRIN2A	Q12879	1464 aa		28.98	■■■□□ 2.23
ABCB8-215	ENST00000488370	CLASP1	Q7Z460	1538 aa		28.98	■■■□□ 2.23
ABCB8-215	ENST00000488370	CEP170	Q5SW79	1584 aa		28.87	■■■□□ 2.21
ABCB8-215	ENST00000488370	IGF1R	P08069	1367 aa		28.83	■■■□□ 2.21
ABCB8-215	ENST00000488370	CUL7	Q14999	1698 aa		28.82	■■■□□ 2.2
ABCB8-215	ENST00000488370	NUP160	Q12769	1436 aa		28.81	■■■□□ 2.2
ABCB8-215	ENST00000488370	CYB5RL	Q6IPT4	315 aa		28.8	■■■□□ 2.2
ABCB8-215	ENST00000488370	ARAP1	Q96P48	1450 aa		28.77	■■■□□ 2.2
ABCB8-215	ENST00000488370	RUSC2	Q8N2Y8	1516 aa		28.71	■■■□□ 2.19
ABCB8-215	ENST00000488370	CARMIL1	Q5VZK9	1371 aa		28.7	■■■□□ 2.18
ABCB8-215	ENST00000488370	ERCC6L2	Q5T890	1561 aa		28.62	■■■□□ 2.17
ABCB8-215	ENST00000488370	SHROOM2	Q13796	1616 aa		28.62	■■■□□ 2.17

Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms