RNA–Protein interactions for RNA: ENST00000493338.1

ABCB8-220, Transcript of ATP binding cassette subfamily B member 8, humanhuman

TSL 3

Gene ABCB8, Length 694 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB8-220ENST00000493338 NISCHQ9Y2I1 1504 aa26.24■■□□□ 1.79
ABCB8-220ENST00000493338 ABCC9O60706 1549 aa24.15■■□□□ 1.46
ABCB8-220ENST00000493338 DNAJC5BQ9UF47 199 aa23.75■■□□□ 1.39
ABCB8-220ENST00000493338 CCDC180Q9P1Z9 1646 aa23.59■■□□□ 1.37
ABCB8-220ENST00000493338 DNAJC5Q9H3Z4 198 aa22.56■■□□□ 1.2
ABCB8-220ENST00000493338 RB1CC1Q8TDY2 1594 aa22.55■■□□□ 1.2
ABCB8-220ENST00000493338 PABPN1Q86U42 306 aaKnown RBP eCLIP22.44■■□□□ 1.18
ABCB8-220ENST00000493338 NACADO15069 1562 aa22.32■■□□□ 1.16
ABCB8-220ENST00000493338 UNC13AQ9UPW8 1703 aa22.08■■□□□ 1.12
ABCB8-220ENST00000493338 MYO15BQ96JP2 1530 aa21.96■■□□□ 1.11
ABCB8-220ENST00000493338 DCAF8L2P0C7V8 631 aa21.94■■□□□ 1.1
ABCB8-220ENST00000493338 BICRAQ9NZM4 1560 aa21.9■■□□□ 1.1
ABCB8-220ENST00000493338 CECR2Q9BXF3 1484 aa21.89■■□□□ 1.09
ABCB8-220ENST00000493338 ZCCHC6Q5VYS8 1495 aaKnown RBP21.83■■□□□ 1.09
ABCB8-220ENST00000493338 DCAF1Q9Y4B6 1507 aa21.71■■□□□ 1.07
ABCB8-220ENST00000493338 CC2D2AQ9P2K1 1620 aa21.69■■□□□ 1.06
ABCB8-220ENST00000493338 SHROOM4Q9ULL8 1493 aa21.64■■□□□ 1.06
ABCB8-220ENST00000493338 EIF4G1Q04637 1599 aaKnown RBP21.43■■□□□ 1.02
ABCB8-220ENST00000493338 SCRIBQ14160 1630 aa21.35■■□□□ 1.01
ABCB8-220ENST00000493338 CUX2O14529 1486 aa21.25■□□□□ 0.99
ABCB8-220ENST00000493338 TRIM41Q8WV44 630 aa21.03■□□□□ 0.96
ABCB8-220ENST00000493338 ERCC6Q03468 1493 aa20.89■□□□□ 0.94
ABCB8-220ENST00000493338 NCAPD3P42695 1498 aa20.58■□□□□ 0.89
ABCB8-220ENST00000493338 NESP48681 1621 aa20.46■□□□□ 0.87
ABCB8-220ENST00000493338 ATAD2BQ9ULI0 1458 aa20.44■□□□□ 0.86
ABCB8-220ENST00000493338 HMGXB3Q12766 1538 aa20.44■□□□□ 0.86
ABCB8-220ENST00000493338 SMARCA2P51531 1590 aa20.42■□□□□ 0.86
ABCB8-220ENST00000493338 SMARCA4P51532 1647 aa20.39■□□□□ 0.86
ABCB8-220ENST00000493338 THOC2Q8NI27 1593 aaKnown RBP20.34■□□□□ 0.85
ABCB8-220ENST00000493338 BAZ1AQ9NRL2 1556 aaPredicted RBP20.34■□□□□ 0.85
ABCB8-220ENST00000493338 OSCARQ8IYS5 282 aa20.24■□□□□ 0.83
ABCB8-220ENST00000493338 PEG3Q9GZU2 1588 aa20.24■□□□□ 0.83
ABCB8-220ENST00000493338 BAZ1BQ9UIG0 1483 aaKnown RBP20.24■□□□□ 0.83
ABCB8-220ENST00000493338 MROH2BQ7Z745 1585 aa20.23■□□□□ 0.83
ABCB8-220ENST00000493338 LAMC3Q9Y6N6 1575 aa20.21■□□□□ 0.83
ABCB8-220ENST00000493338 PDS5BQ9NTI5 1447 aa20.13■□□□□ 0.81
ABCB8-220ENST00000493338 KIF21AQ7Z4S6 1674 aa20.1■□□□□ 0.81
ABCB8-220ENST00000493338 AEBP2Q6ZN18 517 aaPredicted RBP20.03■□□□□ 0.8
ABCB8-220ENST00000493338 WIZO95785 1651 aa19.97■□□□□ 0.79
ABCB8-220ENST00000493338 MRC2Q9UBG0 1479 aa19.96■□□□□ 0.79
ABCB8-220ENST00000493338 RSF1Q96T23 1441 aaPredicted RBP19.93■□□□□ 0.78
ABCB8-220ENST00000493338 WDR62O43379 1518 aa19.91■□□□□ 0.78
ABCB8-220ENST00000493338 CADPSQ9ULU8 1353 aa19.89■□□□□ 0.77
ABCB8-220ENST00000493338 TRHP20396 242 aaPredicted RBP19.87■□□□□ 0.77
ABCB8-220ENST00000493338 RIMBP3CA6NJZ7 1639 aa19.85■□□□□ 0.77
ABCB8-220ENST00000493338 RIMBP3BA6NNM3 1639 aa19.85■□□□□ 0.77
ABCB8-220ENST00000493338 RIMBP3Q9UFD9 1639 aa19.85■□□□□ 0.77
ABCB8-220ENST00000493338 CYB5RLQ6IPT4 315 aa19.81■□□□□ 0.76
ABCB8-220ENST00000493338 TOP2AP11388 1531 aaKnown RBP19.77■□□□□ 0.76
ABCB8-220ENST00000493338 ARHGEF11O15085 1522 aa19.76■□□□□ 0.75
ABCB8-220ENST00000493338 CEP164Q9UPV0 1460 aa19.75■□□□□ 0.75
ABCB8-220ENST00000493338 FANCD2Q9BXW9 1451 aa19.68■□□□□ 0.74
ABCB8-220ENST00000493338 CFTRP13569 1480 aa19.64■□□□□ 0.73
ABCB8-220ENST00000493338 URB2Q14146 1524 aaKnown RBP19.55■□□□□ 0.72
ABCB8-220ENST00000493338 CCDC88BA6NC98 1476 aa19.54■□□□□ 0.72
ABCB8-220ENST00000493338 PRDM2Q13029 1718 aa19.54■□□□□ 0.72
ABCB8-220ENST00000493338 ARAP1Q96P48 1450 aa19.53■□□□□ 0.72
ABCB8-220ENST00000493338 ZNF608Q9ULD9 1512 aaPredicted RBP19.42■□□□□ 0.7
ABCB8-220ENST00000493338 ILDR1Q86SU0 546 aaPredicted RBP19.39■□□□□ 0.69
ABCB8-220ENST00000493338 IFT140Q96RY7 1462 aa19.37■□□□□ 0.69
ABCB8-220ENST00000493338 TOPBP1Q92547 1522 aa19.29■□□□□ 0.68
ABCB8-220ENST00000493338 EIF4G3O43432 1585 aaKnown RBP19.27■□□□□ 0.67
ABCB8-220ENST00000493338 ABCC8Q09428 1581 aa19.27■□□□□ 0.67
ABCB8-220ENST00000493338 FBLN2P98095 1184 aa19.23■□□□□ 0.67
ABCB8-220ENST00000493338 SUPT5HO00267 1087 aaKnown RBP19.22■□□□□ 0.67
ABCB8-220ENST00000493338 DNMBPQ6XZF7 1577 aa19.22■□□□□ 0.67
ABCB8-220ENST00000493338 CHD1O14646 1710 aa19.2■□□□□ 0.66
ABCB8-220ENST00000493338 TARBP1Q13395 1621 aaKnown RBP19.18■□□□□ 0.66
ABCB8-220ENST00000493338 AQRO60306 1485 aaKnown RBP eCLIP19.15■□□□□ 0.664e-8■■■■□ 22.5
ABCB8-220ENST00000493338 POLA1P09884 1462 aaPredicted RBP19.06■□□□□ 0.64
ABCB8-220ENST00000493338 WDR97A6NE52 1622 aa19.03■□□□□ 0.64
ABCB8-220ENST00000493338 CLASP1Q7Z460 1538 aa19■□□□□ 0.63
ABCB8-220ENST00000493338 CUX1P39880 1505 aa18.99■□□□□ 0.63
ABCB8-220ENST00000493338 KDM4FA0A1W2PPD8 638 aa18.96■□□□□ 0.63
ABCB8-220ENST00000493338 CHMP7Q8WUX9 453 aaPredicted RBP18.96■□□□□ 0.63
ABCB8-220ENST00000493338 FGD5Q6ZNL6 1462 aa18.95■□□□□ 0.62
ABCB8-220ENST00000493338 RAD54L2Q9Y4B4 1467 aa18.95■□□□□ 0.62
ABCB8-220ENST00000493338 GAPVD1Q14C86 1478 aa18.94■□□□□ 0.62
ABCB8-220ENST00000493338 SOGA1O94964 1423 aa18.93■□□□□ 0.62
ABCB8-220ENST00000493338 SYNJ1O43426 1573 aa18.92■□□□□ 0.62
ABCB8-220ENST00000493338 SNAPC4Q5SXM2 1469 aa18.91■□□□□ 0.62
ABCB8-220ENST00000493338 MAGI1Q96QZ7 1491 aaPredicted RBP18.91■□□□□ 0.62
ABCB8-220ENST00000493338 TDRD9Q8NDG6 1382 aaKnown RBP18.91■□□□□ 0.62
ABCB8-220ENST00000493338 GRIN2BQ13224 1484 aa18.85■□□□□ 0.61
ABCB8-220ENST00000493338 SYNJ2O15056 1496 aa18.84■□□□□ 0.61
ABCB8-220ENST00000493338 PBRM1Q86U86 1689 aa18.81■□□□□ 0.6
ABCB8-220ENST00000493338 WRNQ14191 1432 aaPredicted RBP eCLIP18.78■□□□□ 0.6
ABCB8-220ENST00000493338 ABCA10Q8WWZ4 1543 aa18.76■□□□□ 0.59
ABCB8-220ENST00000493338 TOP2BQ02880 1626 aa18.75■□□□□ 0.59
ABCB8-220ENST00000493338 BIVM-ERCC5R4GMW8 1640 aa18.74■□□□□ 0.59
ABCB8-220ENST00000493338 ABCA5Q8WWZ7 1642 aa18.72■□□□□ 0.59
ABCB8-220ENST00000493338 FAM69CQ0P6D2 419 aa18.67■□□□□ 0.58
ABCB8-220ENST00000493338 ERCC6L2Q5T890 1561 aa18.64■□□□□ 0.57
ABCB8-220ENST00000493338 GRIN2AQ12879 1464 aa18.61■□□□□ 0.57
ABCB8-220ENST00000493338 FBXO41Q8TF61 875 aa18.59■□□□□ 0.57
ABCB8-220ENST00000493338 ADAMTS12P58397 1594 aa18.59■□□□□ 0.57
ABCB8-220ENST00000493338 KIF13AQ9H1H9 1805 aa18.58■□□□□ 0.56
ABCB8-220ENST00000493338 ABCC10Q5T3U5 1492 aa18.58■□□□□ 0.56
ABCB8-220ENST00000493338 SHROOM2Q13796 1616 aa18.57■□□□□ 0.56
ABCB8-220ENST00000493338 CEP170Q5SW79 1584 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms