RNA–Protein interactions for RNA: ENST00000582985.1

DDX42-215, Transcript of DEAD-box helicase 42, humanhuman

TSL 4

Gene DDX42, Length 543 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-215ENST00000582985 NISCHQ9Y2I1 1504 aa24.05■■□□□ 1.44
DDX42-215ENST00000582985 AEBP2Q6ZN18 517 aaPredicted RBP23.81■■□□□ 1.4
DDX42-215ENST00000582985 CHIC1Q5VXU3 224 aa22.31■■□□□ 1.16
DDX42-215ENST00000582985 ABCC9O60706 1549 aa21.67■■□□□ 1.06
DDX42-215ENST00000582985 CCDC180Q9P1Z9 1646 aa21.59■■□□□ 1.05
DDX42-215ENST00000582985 RB1CC1Q8TDY2 1594 aa20.59■□□□□ 0.89
DDX42-215ENST00000582985 NACADO15069 1562 aa20.44■□□□□ 0.86
DDX42-215ENST00000582985 DNAJC5BQ9UF47 199 aa20.39■□□□□ 0.85
DDX42-215ENST00000582985 DCAF8L2P0C7V8 631 aa20.32■□□□□ 0.84
DDX42-215ENST00000582985 PABPN1Q86U42 306 aaKnown RBP eCLIP20.17■□□□□ 0.821e-6■■□□□ 14.2
DDX42-215ENST00000582985 MYO15BQ96JP2 1530 aa20.14■□□□□ 0.81
DDX42-215ENST00000582985 SENP3Q9H4L4 574 aaPredicted RBP20.14■□□□□ 0.81
DDX42-215ENST00000582985 UNC13AQ9UPW8 1703 aa20.1■□□□□ 0.81
DDX42-215ENST00000582985 BICRAQ9NZM4 1560 aa20■□□□□ 0.79
DDX42-215ENST00000582985 PHF23Q9BUL5 403 aaPredicted RBP19.94■□□□□ 0.78
DDX42-215ENST00000582985 ZCCHC6Q5VYS8 1495 aaKnown RBP19.92■□□□□ 0.78
DDX42-215ENST00000582985 DCAF1Q9Y4B6 1507 aa19.86■□□□□ 0.77
DDX42-215ENST00000582985 SHROOM4Q9ULL8 1493 aa19.73■□□□□ 0.75
DDX42-215ENST00000582985 SCRIBQ14160 1630 aa19.68■□□□□ 0.74
DDX42-215ENST00000582985 CC2D2AQ9P2K1 1620 aa19.56■□□□□ 0.72
DDX42-215ENST00000582985 CECR2Q9BXF3 1484 aa19.53■□□□□ 0.72
DDX42-215ENST00000582985 EIF4G1Q04637 1599 aaKnown RBP19.51■□□□□ 0.71
DDX42-215ENST00000582985 FOXD1Q16676 465 aa18.93■□□□□ 0.62
DDX42-215ENST00000582985 NCAPD3P42695 1498 aa18.87■□□□□ 0.61
DDX42-215ENST00000582985 ATAD2BQ9ULI0 1458 aa18.81■□□□□ 0.6
DDX42-215ENST00000582985 SMARCA4P51532 1647 aa18.77■□□□□ 0.6
DDX42-215ENST00000582985 DNAJC5Q9H3Z4 198 aa18.76■□□□□ 0.59
DDX42-215ENST00000582985 SMARCA2P51531 1590 aa18.75■□□□□ 0.59
DDX42-215ENST00000582985 HMGXB3Q12766 1538 aa18.73■□□□□ 0.59
DDX42-215ENST00000582985 ERCC6Q03468 1493 aa18.71■□□□□ 0.59
DDX42-215ENST00000582985 CUX2O14529 1486 aa18.71■□□□□ 0.59
DDX42-215ENST00000582985 BAZ1AQ9NRL2 1556 aaPredicted RBP18.67■□□□□ 0.58
DDX42-215ENST00000582985 BAZ1BQ9UIG0 1483 aaKnown RBP18.62■□□□□ 0.57
DDX42-215ENST00000582985 NESP48681 1621 aa18.6■□□□□ 0.57
DDX42-215ENST00000582985 PEG3Q9GZU2 1588 aa18.59■□□□□ 0.57
DDX42-215ENST00000582985 MROH2BQ7Z745 1585 aa18.53■□□□□ 0.56
DDX42-215ENST00000582985 LAMC3Q9Y6N6 1575 aa18.45■□□□□ 0.54
DDX42-215ENST00000582985 THOC2Q8NI27 1593 aaKnown RBP18.42■□□□□ 0.54
DDX42-215ENST00000582985 PDS5BQ9NTI5 1447 aa18.35■□□□□ 0.53
DDX42-215ENST00000582985 KIF21AQ7Z4S6 1674 aa18.34■□□□□ 0.53
DDX42-215ENST00000582985 CADPSQ9ULU8 1353 aa18.3■□□□□ 0.52
DDX42-215ENST00000582985 WIZO95785 1651 aa18.29■□□□□ 0.52
DDX42-215ENST00000582985 MRC2Q9UBG0 1479 aa18.2■□□□□ 0.5
DDX42-215ENST00000582985 WDR62O43379 1518 aa18.16■□□□□ 0.5
DDX42-215ENST00000582985 RSF1Q96T23 1441 aaPredicted RBP18.13■□□□□ 0.49
DDX42-215ENST00000582985 CEP164Q9UPV0 1460 aa18.11■□□□□ 0.49
DDX42-215ENST00000582985 FANCD2Q9BXW9 1451 aa18.09■□□□□ 0.49
DDX42-215ENST00000582985 CFTRP13569 1480 aa18.07■□□□□ 0.48
DDX42-215ENST00000582985 TOP2AP11388 1531 aaKnown RBP18.07■□□□□ 0.48
DDX42-215ENST00000582985 URB2Q14146 1524 aaKnown RBP17.94■□□□□ 0.46
DDX42-215ENST00000582985 TRIM41Q8WV44 630 aa17.91■□□□□ 0.46
DDX42-215ENST00000582985 CCDC88BA6NC98 1476 aa17.87■□□□□ 0.45
DDX42-215ENST00000582985 PRDM2Q13029 1718 aa17.86■□□□□ 0.45
DDX42-215ENST00000582985 OSCARQ8IYS5 282 aa17.84■□□□□ 0.45
DDX42-215ENST00000582985 IFT140Q96RY7 1462 aa17.75■□□□□ 0.43
DDX42-215ENST00000582985 TOPBP1Q92547 1522 aa17.74■□□□□ 0.43
DDX42-215ENST00000582985 ZNF608Q9ULD9 1512 aaPredicted RBP17.73■□□□□ 0.43
DDX42-215ENST00000582985 ABCC8Q09428 1581 aa17.69■□□□□ 0.42
DDX42-215ENST00000582985 POTEDQ86YR6 584 aa17.67■□□□□ 0.42
DDX42-215ENST00000582985 DNMBPQ6XZF7 1577 aa17.66■□□□□ 0.42
DDX42-215ENST00000582985 PLPPR3Q6T4P5 718 aa17.66■□□□□ 0.42
DDX42-215ENST00000582985 EIF4G3O43432 1585 aaKnown RBP17.63■□□□□ 0.41
DDX42-215ENST00000582985 MSH5O43196 834 aa17.63■□□□□ 0.41
DDX42-215ENST00000582985 PPP6R1Q9UPN7 881 aa17.63■□□□□ 0.41
DDX42-215ENST00000582985 RIMBP3CA6NJZ7 1639 aa17.61■□□□□ 0.41
DDX42-215ENST00000582985 RIMBP3BA6NNM3 1639 aa17.61■□□□□ 0.41
DDX42-215ENST00000582985 RIMBP3Q9UFD9 1639 aa17.61■□□□□ 0.41
DDX42-215ENST00000582985 TARBP1Q13395 1621 aaKnown RBP17.58■□□□□ 0.41
DDX42-215ENST00000582985 PIAS4Q8N2W9 510 aaPredicted RBP17.57■□□□□ 0.4
DDX42-215ENST00000582985 AQRO60306 1485 aaKnown RBP eCLIP17.56■□□□□ 0.4
DDX42-215ENST00000582985 POLA1P09884 1462 aaPredicted RBP17.56■□□□□ 0.4
DDX42-215ENST00000582985 ARHGEF11O15085 1522 aa17.55■□□□□ 0.4
DDX42-215ENST00000582985 ADRA2BP18089 450 aa17.51■□□□□ 0.39
DDX42-215ENST00000582985 RAD54L2Q9Y4B4 1467 aa17.5■□□□□ 0.39
DDX42-215ENST00000582985 CHD1O14646 1710 aa17.5■□□□□ 0.39
DDX42-215ENST00000582985 SOGA1O94964 1423 aa17.47■□□□□ 0.39
DDX42-215ENST00000582985 FBLN2P98095 1184 aa17.46■□□□□ 0.39
DDX42-215ENST00000582985 TDRD9Q8NDG6 1382 aaKnown RBP17.45■□□□□ 0.38
DDX42-215ENST00000582985 FGD5Q6ZNL6 1462 aa17.44■□□□□ 0.38
DDX42-215ENST00000582985 CYB5RLQ6IPT4 315 aa17.43■□□□□ 0.38
DDX42-215ENST00000582985 CUX1P39880 1505 aa17.42■□□□□ 0.38
DDX42-215ENST00000582985 WDR97A6NE52 1622 aa17.39■□□□□ 0.38
DDX42-215ENST00000582985 SNAPC4Q5SXM2 1469 aa17.38■□□□□ 0.37
DDX42-215ENST00000582985 ARAP1Q96P48 1450 aa17.37■□□□□ 0.37
DDX42-215ENST00000582985 MAGI1Q96QZ7 1491 aaPredicted RBP17.34■□□□□ 0.37
DDX42-215ENST00000582985 GRIN2BQ13224 1484 aa17.33■□□□□ 0.37
DDX42-215ENST00000582985 CHMP7Q8WUX9 453 aaPredicted RBP17.33■□□□□ 0.36
DDX42-215ENST00000582985 CLASP1Q7Z460 1538 aa17.31■□□□□ 0.36
DDX42-215ENST00000582985 SYNJ1O43426 1573 aa17.29■□□□□ 0.36
DDX42-215ENST00000582985 SYNJ2O15056 1496 aa17.28■□□□□ 0.36
DDX42-215ENST00000582985 SUPT5HO00267 1087 aaKnown RBP17.27■□□□□ 0.36
DDX42-215ENST00000582985 GAPVD1Q14C86 1478 aa17.26■□□□□ 0.35
DDX42-215ENST00000582985 TRHP20396 242 aaPredicted RBP17.25■□□□□ 0.35
DDX42-215ENST00000582985 PBRM1Q86U86 1689 aa17.24■□□□□ 0.35
DDX42-215ENST00000582985 ABCA10Q8WWZ4 1543 aa17.24■□□□□ 0.35
DDX42-215ENST00000582985 ABCA5Q8WWZ7 1642 aa17.21■□□□□ 0.35
DDX42-215ENST00000582985 WRNQ14191 1432 aaPredicted RBP eCLIP17.16■□□□□ 0.34
DDX42-215ENST00000582985 TOP2BQ02880 1626 aa17.11■□□□□ 0.33
DDX42-215ENST00000582985 GRIN2AQ12879 1464 aa17.11■□□□□ 0.33
DDX42-215ENST00000582985 BIVM-ERCC5R4GMW8 1640 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms