RNA–Protein interactions for RNA: ENST00000532445.1

NCAPD3-209, Transcript of non-SMC condensin II complex subunit D3, humanhuman

APPRIS ALT2 TSL 3

Gene NCAPD3, Length 532 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3-209ENST00000532445 NISCHQ9Y2I1 1504 aa57.4■■■■■ 6.78
NCAPD3-209ENST00000532445 CCDC180Q9P1Z9 1646 aa51.53■■■■■ 5.84
NCAPD3-209ENST00000532445 ABCC9O60706 1549 aa50.79■■■■■ 5.72
NCAPD3-209ENST00000532445 RB1CC1Q8TDY2 1594 aa48.72■■■■■ 5.39
NCAPD3-209ENST00000532445 NACADO15069 1562 aa48.46■■■■■ 5.35
NCAPD3-209ENST00000532445 DCAF8L2P0C7V8 631 aa48.12■■■■■ 5.29
NCAPD3-209ENST00000532445 MYO15BQ96JP2 1530 aa47.92■■■■■ 5.26
NCAPD3-209ENST00000532445 UNC13AQ9UPW8 1703 aa47.74■■■■■ 5.23
NCAPD3-209ENST00000532445 ZCCHC6Q5VYS8 1495 aaKnown RBP47.71■■■■■ 5.23
NCAPD3-209ENST00000532445 DCAF1Q9Y4B6 1507 aa47.5■■■■■ 5.19
NCAPD3-209ENST00000532445 PABPN1Q86U42 306 aaKnown RBP eCLIP47.23■■■■■ 5.15
NCAPD3-209ENST00000532445 BICRAQ9NZM4 1560 aa47.17■■■■■ 5.14
NCAPD3-209ENST00000532445 DNAJC5BQ9UF47 199 aa46.96■■■■■ 5.11
NCAPD3-209ENST00000532445 SCRIBQ14160 1630 aa46.87■■■■■ 5.09
NCAPD3-209ENST00000532445 SHROOM4Q9ULL8 1493 aa46.69■■■■■ 5.06
NCAPD3-209ENST00000532445 EIF4G1Q04637 1599 aaKnown RBP46.01■■■■■ 4.96
NCAPD3-209ENST00000532445 CC2D2AQ9P2K1 1620 aa46■■■■■ 4.95
NCAPD3-209ENST00000532445 CECR2Q9BXF3 1484 aa45.71■■■■■ 4.91
NCAPD3-209ENST00000532445 SMARCA4P51532 1647 aa44.77■■■■■ 4.76
NCAPD3-209ENST00000532445 BAZ1AQ9NRL2 1556 aaPredicted RBP44.61■■■■■ 4.73
NCAPD3-209ENST00000532445 NCAPD3P42695 1498 aa44.6■■■■■ 4.73
NCAPD3-209ENST00000532445 SMARCA2P51531 1590 aa44.59■■■■■ 4.73
NCAPD3-209ENST00000532445 ATAD2BQ9ULI0 1458 aa44.55■■■■■ 4.72
NCAPD3-209ENST00000532445 HMGXB3Q12766 1538 aa44.46■■■■■ 4.71
NCAPD3-209ENST00000532445 PEG3Q9GZU2 1588 aa44.3■■■■■ 4.68
NCAPD3-209ENST00000532445 BAZ1BQ9UIG0 1483 aaKnown RBP44.24■■■■■ 4.67
NCAPD3-209ENST00000532445 MROH2BQ7Z745 1585 aa44.21■■■■■ 4.67
NCAPD3-209ENST00000532445 ERCC6Q03468 1493 aa43.9■■■■■ 4.62
NCAPD3-209ENST00000532445 WIZO95785 1651 aa43.81■■■■■ 4.6
NCAPD3-209ENST00000532445 NESP48681 1621 aa43.76■■■■■ 4.6
NCAPD3-209ENST00000532445 LAMC3Q9Y6N6 1575 aa43.69■■■■■ 4.58
NCAPD3-209ENST00000532445 CUX2O14529 1486 aa43.64■■■■■ 4.58
NCAPD3-209ENST00000532445 KIF21AQ7Z4S6 1674 aa43.43■■■■■ 4.54
NCAPD3-209ENST00000532445 RSF1Q96T23 1441 aaPredicted RBP43.42■■■■■ 4.54
NCAPD3-209ENST00000532445 THOC2Q8NI27 1593 aaKnown RBP43.36■■■■■ 4.53
NCAPD3-209ENST00000532445 PDS5BQ9NTI5 1447 aa43.31■■■■■ 4.52
NCAPD3-209ENST00000532445 TOP2AP11388 1531 aaKnown RBP43.29■■■■■ 4.52
NCAPD3-209ENST00000532445 CADPSQ9ULU8 1353 aa43.26■■■■■ 4.52
NCAPD3-209ENST00000532445 MRC2Q9UBG0 1479 aa42.94■■■■■ 4.46
NCAPD3-209ENST00000532445 CFTRP13569 1480 aa42.9■■■■■ 4.46
NCAPD3-209ENST00000532445 CEP164Q9UPV0 1460 aa42.9■■■■■ 4.46
NCAPD3-209ENST00000532445 PRDM2Q13029 1718 aa42.89■■■■■ 4.46
NCAPD3-209ENST00000532445 DNAJC5Q9H3Z4 198 aa42.86■■■■■ 4.45
NCAPD3-209ENST00000532445 WDR62O43379 1518 aa42.84■■■■■ 4.45
NCAPD3-209ENST00000532445 FANCD2Q9BXW9 1451 aa42.84■■■■■ 4.45
NCAPD3-209ENST00000532445 CCDC88BA6NC98 1476 aa42.67■■■■■ 4.42
NCAPD3-209ENST00000532445 URB2Q14146 1524 aaKnown RBP42.43■■■■■ 4.38
NCAPD3-209ENST00000532445 TOPBP1Q92547 1522 aa42.1■■■■■ 4.33
NCAPD3-209ENST00000532445 ABCC8Q09428 1581 aa42.1■■■■■ 4.33
NCAPD3-209ENST00000532445 DNMBPQ6XZF7 1577 aa42.06■■■■■ 4.32
NCAPD3-209ENST00000532445 IFT140Q96RY7 1462 aa41.98■■■■■ 4.31
NCAPD3-209ENST00000532445 SUPT5HO00267 1087 aaKnown RBP41.84■■■■■ 4.29
NCAPD3-209ENST00000532445 ZNF608Q9ULD9 1512 aaPredicted RBP41.79■■■■■ 4.28
NCAPD3-209ENST00000532445 EIF4G3O43432 1585 aaKnown RBP41.77■■■■■ 4.28
NCAPD3-209ENST00000532445 TARBP1Q13395 1621 aaKnown RBP41.73■■■■■ 4.27
NCAPD3-209ENST00000532445 POLA1P09884 1462 aaPredicted RBP41.67■■■■■ 4.26
NCAPD3-209ENST00000532445 OSCARQ8IYS5 282 aa41.6■■■■■ 4.25
NCAPD3-209ENST00000532445 CUX1P39880 1505 aa41.54■■■■■ 4.24
NCAPD3-209ENST00000532445 FGD5Q6ZNL6 1462 aa41.51■■■■■ 4.24
NCAPD3-209ENST00000532445 AQRO60306 1485 aaKnown RBP eCLIP41.46■■■■■ 4.23
NCAPD3-209ENST00000532445 RAD54L2Q9Y4B4 1467 aa41.46■■■■■ 4.23
NCAPD3-209ENST00000532445 SOGA1O94964 1423 aa41.45■■■■■ 4.23
NCAPD3-209ENST00000532445 WDR97A6NE52 1622 aa41.45■■■■■ 4.23
NCAPD3-209ENST00000532445 CHD1O14646 1710 aa41.44■■■■■ 4.22
NCAPD3-209ENST00000532445 TDRD9Q8NDG6 1382 aaKnown RBP41.26■■■■■ 4.2
NCAPD3-209ENST00000532445 TRIM41Q8WV44 630 aa41.25■■■■■ 4.19
NCAPD3-209ENST00000532445 PBRM1Q86U86 1689 aa41.19■■■■■ 4.18
NCAPD3-209ENST00000532445 RIMBP3CA6NJZ7 1639 aa41.18■■■■■ 4.18
NCAPD3-209ENST00000532445 RIMBP3BA6NNM3 1639 aa41.18■■■■■ 4.18
NCAPD3-209ENST00000532445 RIMBP3Q9UFD9 1639 aa41.18■■■■■ 4.18
NCAPD3-209ENST00000532445 BIVM-ERCC5R4GMW8 1640 aa41.15■■■■■ 4.18
NCAPD3-209ENST00000532445 SNAPC4Q5SXM2 1469 aa41.15■■■■■ 4.18
NCAPD3-209ENST00000532445 GRIN2BQ13224 1484 aa41.09■■■■■ 4.17
NCAPD3-209ENST00000532445 TOP2BQ02880 1626 aa41.09■■■■■ 4.17
NCAPD3-209ENST00000532445 FBLN2P98095 1184 aa41.09■■■■■ 4.17
NCAPD3-209ENST00000532445 MAGI1Q96QZ7 1491 aaPredicted RBP41.09■■■■■ 4.17
NCAPD3-209ENST00000532445 ABCA10Q8WWZ4 1543 aa41.06■■■■■ 4.16
NCAPD3-209ENST00000532445 ABCA5Q8WWZ7 1642 aa41.05■■■■■ 4.16
NCAPD3-209ENST00000532445 ARHGEF11O15085 1522 aa41.04■■■■■ 4.16
NCAPD3-209ENST00000532445 WRNQ14191 1432 aaPredicted RBP eCLIP41.03■■■■■ 4.16
NCAPD3-209ENST00000532445 SYNJ1O43426 1573 aa41.02■■■■■ 4.16
NCAPD3-209ENST00000532445 GAPVD1Q14C86 1478 aa41.02■■■■■ 4.16
NCAPD3-209ENST00000532445 SYNJ2O15056 1496 aa40.92■■■■■ 4.14
NCAPD3-209ENST00000532445 CHMP7Q8WUX9 453 aaPredicted RBP40.88■■■■■ 4.13
NCAPD3-209ENST00000532445 CLASP1Q7Z460 1538 aa40.83■■■■■ 4.13
NCAPD3-209ENST00000532445 ADAMTS12P58397 1594 aa40.7■■■■■ 4.11
NCAPD3-209ENST00000532445 ARAP1Q96P48 1450 aa40.64■■■■■ 4.1
NCAPD3-209ENST00000532445 ERICH3Q5RHP9 1530 aa40.61■■■■■ 4.09
NCAPD3-209ENST00000532445 GRIN2AQ12879 1464 aa40.58■■■■■ 4.09
NCAPD3-209ENST00000532445 CYB5RLQ6IPT4 315 aa40.57■■■■■ 4.09
NCAPD3-209ENST00000532445 FHAD1B1AJZ9 1412 aa40.5■■■■■ 4.07
NCAPD3-209ENST00000532445 CEP170Q5SW79 1584 aa40.44■■■■■ 4.06
NCAPD3-209ENST00000532445 NUP160Q12769 1436 aa40.38■■■■■ 4.05
NCAPD3-209ENST00000532445 SHROOM2Q13796 1616 aa40.27■■■■■ 4.04
NCAPD3-209ENST00000532445 CUL7Q14999 1698 aa40.24■■■■■ 4.03
NCAPD3-209ENST00000532445 KIF27Q86VH2 1401 aa40.22■■■■■ 4.03
NCAPD3-209ENST00000532445 ERCC6L2Q5T890 1561 aa40.16■■■■■ 4.02
NCAPD3-209ENST00000532445 RUSC2Q8N2Y8 1516 aa40.13■■■■■ 4.01
NCAPD3-209ENST00000532445 TRHP20396 242 aaPredicted RBP40.03■■■■■ 4
NCAPD3-209ENST00000532445 IGF1RP08069 1367 aa40.01■■■■■ 4
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms