RNA–Protein interactions for RNA: ENST00000488551.5

ABCB8-216, Transcript of ATP binding cassette subfamily B member 8, humanhuman

TSL 4

Gene ABCB8, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB8-216ENST00000488551 NISCHQ9Y2I1 1504 aa26.57■■□□□ 1.84
ABCB8-216ENST00000488551 ABCC9O60706 1549 aa24.32■■□□□ 1.48
ABCB8-216ENST00000488551 CCDC180Q9P1Z9 1646 aa24.07■■□□□ 1.44
ABCB8-216ENST00000488551 DNAJC5BQ9UF47 199 aa23.1■■□□□ 1.29
ABCB8-216ENST00000488551 RB1CC1Q8TDY2 1594 aa23.06■■□□□ 1.28
ABCB8-216ENST00000488551 NACADO15069 1562 aa22.81■■□□□ 1.24
ABCB8-216ENST00000488551 UNC13AQ9UPW8 1703 aa22.56■■□□□ 1.2
ABCB8-216ENST00000488551 PABPN1Q86U42 306 aaKnown RBP eCLIP22.55■■□□□ 1.2
ABCB8-216ENST00000488551 DCAF8L2P0C7V8 631 aa22.51■■□□□ 1.19
ABCB8-216ENST00000488551 MYO15BQ96JP2 1530 aa22.41■■□□□ 1.18
ABCB8-216ENST00000488551 BICRAQ9NZM4 1560 aa22.37■■□□□ 1.17
ABCB8-216ENST00000488551 SHROOM4Q9ULL8 1493 aa22.11■■□□□ 1.13
ABCB8-216ENST00000488551 CC2D2AQ9P2K1 1620 aa21.99■■□□□ 1.11
ABCB8-216ENST00000488551 CECR2Q9BXF3 1484 aa21.98■■□□□ 1.11
ABCB8-216ENST00000488551 DCAF1Q9Y4B6 1507 aa21.96■■□□□ 1.11
ABCB8-216ENST00000488551 ZCCHC6Q5VYS8 1495 aaKnown RBP21.94■■□□□ 1.1
ABCB8-216ENST00000488551 EIF4G1Q04637 1599 aaKnown RBP21.87■■□□□ 1.09
ABCB8-216ENST00000488551 SCRIBQ14160 1630 aa21.84■■□□□ 1.09
ABCB8-216ENST00000488551 DNAJC5Q9H3Z4 198 aa21.54■■□□□ 1.04
ABCB8-216ENST00000488551 CUX2O14529 1486 aa21.18■□□□□ 0.98
ABCB8-216ENST00000488551 ERCC6Q03468 1493 aa21.07■□□□□ 0.96
ABCB8-216ENST00000488551 NCAPD3P42695 1498 aa21.04■□□□□ 0.96
ABCB8-216ENST00000488551 ATAD2BQ9ULI0 1458 aa20.91■□□□□ 0.94
ABCB8-216ENST00000488551 HMGXB3Q12766 1538 aa20.88■□□□□ 0.93
ABCB8-216ENST00000488551 SMARCA2P51531 1590 aa20.88■□□□□ 0.93
ABCB8-216ENST00000488551 SMARCA4P51532 1647 aa20.82■□□□□ 0.92
ABCB8-216ENST00000488551 NESP48681 1621 aa20.78■□□□□ 0.92
ABCB8-216ENST00000488551 BAZ1BQ9UIG0 1483 aaKnown RBP20.7■□□□□ 0.9
ABCB8-216ENST00000488551 THOC2Q8NI27 1593 aaKnown RBP20.7■□□□□ 0.9
ABCB8-216ENST00000488551 BAZ1AQ9NRL2 1556 aaPredicted RBP20.68■□□□□ 0.9
ABCB8-216ENST00000488551 LAMC3Q9Y6N6 1575 aa20.66■□□□□ 0.9
ABCB8-216ENST00000488551 PEG3Q9GZU2 1588 aa20.64■□□□□ 0.9
ABCB8-216ENST00000488551 KIF21AQ7Z4S6 1674 aa20.57■□□□□ 0.88
ABCB8-216ENST00000488551 PDS5BQ9NTI5 1447 aa20.53■□□□□ 0.88
ABCB8-216ENST00000488551 MROH2BQ7Z745 1585 aa20.43■□□□□ 0.86
ABCB8-216ENST00000488551 TRIM41Q8WV44 630 aa20.4■□□□□ 0.86
ABCB8-216ENST00000488551 CADPSQ9ULU8 1353 aa20.37■□□□□ 0.85
ABCB8-216ENST00000488551 MRC2Q9UBG0 1479 aa20.37■□□□□ 0.85
ABCB8-216ENST00000488551 WDR62O43379 1518 aa20.34■□□□□ 0.85
ABCB8-216ENST00000488551 CEP164Q9UPV0 1460 aa20.21■□□□□ 0.83
ABCB8-216ENST00000488551 WIZO95785 1651 aa20.19■□□□□ 0.82
ABCB8-216ENST00000488551 FANCD2Q9BXW9 1451 aa20.14■□□□□ 0.81
ABCB8-216ENST00000488551 OSCARQ8IYS5 282 aa20.11■□□□□ 0.81
ABCB8-216ENST00000488551 CFTRP13569 1480 aa20.07■□□□□ 0.8
ABCB8-216ENST00000488551 URB2Q14146 1524 aaKnown RBP19.99■□□□□ 0.79
ABCB8-216ENST00000488551 PRDM2Q13029 1718 aa19.93■□□□□ 0.78
ABCB8-216ENST00000488551 TOP2AP11388 1531 aaKnown RBP19.93■□□□□ 0.78
ABCB8-216ENST00000488551 RIMBP3CA6NJZ7 1639 aa19.91■□□□□ 0.78
ABCB8-216ENST00000488551 RIMBP3BA6NNM3 1639 aa19.91■□□□□ 0.78
ABCB8-216ENST00000488551 RIMBP3Q9UFD9 1639 aa19.91■□□□□ 0.78
ABCB8-216ENST00000488551 RSF1Q96T23 1441 aaPredicted RBP19.88■□□□□ 0.77
ABCB8-216ENST00000488551 IFT140Q96RY7 1462 aa19.83■□□□□ 0.76
ABCB8-216ENST00000488551 ARHGEF11O15085 1522 aa19.81■□□□□ 0.76
ABCB8-216ENST00000488551 ZNF608Q9ULD9 1512 aaPredicted RBP19.79■□□□□ 0.76
ABCB8-216ENST00000488551 TOPBP1Q92547 1522 aa19.72■□□□□ 0.75
ABCB8-216ENST00000488551 EIF4G3O43432 1585 aaKnown RBP19.7■□□□□ 0.74
ABCB8-216ENST00000488551 ABCC8Q09428 1581 aa19.7■□□□□ 0.74
ABCB8-216ENST00000488551 CCDC88BA6NC98 1476 aa19.67■□□□□ 0.74
ABCB8-216ENST00000488551 CHD1O14646 1710 aa19.65■□□□□ 0.74
ABCB8-216ENST00000488551 CYB5RLQ6IPT4 315 aa19.64■□□□□ 0.73
ABCB8-216ENST00000488551 DNMBPQ6XZF7 1577 aa19.64■□□□□ 0.73
ABCB8-216ENST00000488551 TARBP1Q13395 1621 aaKnown RBP19.59■□□□□ 0.73
ABCB8-216ENST00000488551 AQRO60306 1485 aaKnown RBP eCLIP19.56■□□□□ 0.724e-7■■■■□ 26.3
ABCB8-216ENST00000488551 ARAP1Q96P48 1450 aa19.56■□□□□ 0.72
ABCB8-216ENST00000488551 TRHP20396 242 aaPredicted RBP19.54■□□□□ 0.72
ABCB8-216ENST00000488551 FBLN2P98095 1184 aa19.5■□□□□ 0.71
ABCB8-216ENST00000488551 POLA1P09884 1462 aaPredicted RBP19.49■□□□□ 0.71
ABCB8-216ENST00000488551 WDR97A6NE52 1622 aa19.43■□□□□ 0.7
ABCB8-216ENST00000488551 RAD54L2Q9Y4B4 1467 aa19.4■□□□□ 0.7
ABCB8-216ENST00000488551 CLASP1Q7Z460 1538 aa19.39■□□□□ 0.69
ABCB8-216ENST00000488551 SOGA1O94964 1423 aa19.38■□□□□ 0.69
ABCB8-216ENST00000488551 TDRD9Q8NDG6 1382 aaKnown RBP19.37■□□□□ 0.69
ABCB8-216ENST00000488551 SYNJ1O43426 1573 aa19.36■□□□□ 0.69
ABCB8-216ENST00000488551 SNAPC4Q5SXM2 1469 aa19.36■□□□□ 0.69
ABCB8-216ENST00000488551 MAGI1Q96QZ7 1491 aaPredicted RBP19.35■□□□□ 0.69
ABCB8-216ENST00000488551 CHMP7Q8WUX9 453 aaPredicted RBP19.32■□□□□ 0.68
ABCB8-216ENST00000488551 FGD5Q6ZNL6 1462 aa19.31■□□□□ 0.68
ABCB8-216ENST00000488551 GRIN2BQ13224 1484 aa19.28■□□□□ 0.68
ABCB8-216ENST00000488551 SYNJ2O15056 1496 aa19.28■□□□□ 0.68
ABCB8-216ENST00000488551 AEBP2Q6ZN18 517 aaPredicted RBP19.27■□□□□ 0.68
ABCB8-216ENST00000488551 CUX1P39880 1505 aa19.23■□□□□ 0.67
ABCB8-216ENST00000488551 PBRM1Q86U86 1689 aa19.21■□□□□ 0.67
ABCB8-216ENST00000488551 GAPVD1Q14C86 1478 aa19.2■□□□□ 0.66
ABCB8-216ENST00000488551 ABCA5Q8WWZ7 1642 aa19.11■□□□□ 0.65
ABCB8-216ENST00000488551 ABCA10Q8WWZ4 1543 aa19.1■□□□□ 0.65
ABCB8-216ENST00000488551 GRIN2AQ12879 1464 aa19.03■□□□□ 0.64
ABCB8-216ENST00000488551 ERCC6L2Q5T890 1561 aa19.02■□□□□ 0.63
ABCB8-216ENST00000488551 CEP170Q5SW79 1584 aa19■□□□□ 0.63
ABCB8-216ENST00000488551 ADAMTS12P58397 1594 aa18.99■□□□□ 0.63
ABCB8-216ENST00000488551 NUP160Q12769 1436 aa18.99■□□□□ 0.63
ABCB8-216ENST00000488551 SHROOM2Q13796 1616 aa18.97■□□□□ 0.63
ABCB8-216ENST00000488551 WRNQ14191 1432 aaPredicted RBP eCLIP18.95■□□□□ 0.62
ABCB8-216ENST00000488551 KIF13AQ9H1H9 1805 aa18.94■□□□□ 0.62
ABCB8-216ENST00000488551 FHAD1B1AJZ9 1412 aa18.91■□□□□ 0.62
ABCB8-216ENST00000488551 BIVM-ERCC5R4GMW8 1640 aa18.87■□□□□ 0.61
ABCB8-216ENST00000488551 TOP2BQ02880 1626 aa18.86■□□□□ 0.61
ABCB8-216ENST00000488551 ERICH3Q5RHP9 1530 aa18.86■□□□□ 0.61
ABCB8-216ENST00000488551 PRG4Q92954 1404 aaPredicted RBP18.82■□□□□ 0.6
ABCB8-216ENST00000488551 JPH4Q96JJ6 628 aa18.76■□□□□ 0.59
ABCB8-216ENST00000488551 ABCC10Q5T3U5 1492 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms