RNA–Protein interactions for RNA: ENST00000549505.5

RAB5B-206, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5B, Length 3,148 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-206ENST00000549505 NISCHQ9Y2I1 1504 aa22.47■■□□□ 1.19
RAB5B-206ENST00000549505 CCDC180Q9P1Z9 1646 aa19.65■□□□□ 0.74
RAB5B-206ENST00000549505 ZCCHC6Q5VYS8 1495 aaKnown RBP19■□□□□ 0.63
RAB5B-206ENST00000549505 DCAF1Q9Y4B6 1507 aa18.82■□□□□ 0.6
RAB5B-206ENST00000549505 MYO15BQ96JP2 1530 aa18.55■□□□□ 0.56
RAB5B-206ENST00000549505 NACADO15069 1562 aa18.14■□□□□ 0.49
RAB5B-206ENST00000549505 SHROOM4Q9ULL8 1493 aa17.99■□□□□ 0.47
RAB5B-206ENST00000549505 ABCC9O60706 1549 aa17.84■□□□□ 0.45
RAB5B-206ENST00000549505 RB1CC1Q8TDY2 1594 aa17.83■□□□□ 0.45
RAB5B-206ENST00000549505 DCAF8L2P0C7V8 631 aa17.77■□□□□ 0.44
RAB5B-206ENST00000549505 SCRIBQ14160 1630 aa17.75■□□□□ 0.43
RAB5B-206ENST00000549505 UNC13AQ9UPW8 1703 aa17.52■□□□□ 0.4
RAB5B-206ENST00000549505 RSF1Q96T23 1441 aaPredicted RBP17.47■□□□□ 0.39
RAB5B-206ENST00000549505 SUPT5HO00267 1087 aaKnown RBP17.42■□□□□ 0.38
RAB5B-206ENST00000549505 BICRAQ9NZM4 1560 aa17.35■□□□□ 0.37
RAB5B-206ENST00000549505 BAZ1AQ9NRL2 1556 aaPredicted RBP17.33■□□□□ 0.36
RAB5B-206ENST00000549505 CECR2Q9BXF3 1484 aa17.28■□□□□ 0.36
RAB5B-206ENST00000549505 MROH2BQ7Z745 1585 aa17.28■□□□□ 0.36
RAB5B-206ENST00000549505 SMARCA4P51532 1647 aa17.22■□□□□ 0.35
RAB5B-206ENST00000549505 PEG3Q9GZU2 1588 aa17.18■□□□□ 0.34
RAB5B-206ENST00000549505 WIZO95785 1651 aa17.13■□□□□ 0.33
RAB5B-206ENST00000549505 CHIC1Q5VXU3 224 aa17.1■□□□□ 0.33
RAB5B-206ENST00000549505 TOP2AP11388 1531 aaKnown RBP17.1■□□□□ 0.33
RAB5B-206ENST00000549505 EIF4G1Q04637 1599 aaKnown RBP17.06■□□□□ 0.32
RAB5B-206ENST00000549505 SMARCA2P51531 1590 aa16.92■□□□□ 0.3
RAB5B-206ENST00000549505 ATAD2BQ9ULI0 1458 aa16.82■□□□□ 0.28
RAB5B-206ENST00000549505 CCDC88BA6NC98 1476 aa16.82■□□□□ 0.28
RAB5B-206ENST00000549505 HMGXB3Q12766 1538 aa16.77■□□□□ 0.28
RAB5B-206ENST00000549505 PABPN1Q86U42 306 aaKnown RBP eCLIP16.74■□□□□ 0.27
RAB5B-206ENST00000549505 NCAPD3P42695 1498 aa16.71■□□□□ 0.27
RAB5B-206ENST00000549505 BAZ1BQ9UIG0 1483 aaKnown RBP16.66■□□□□ 0.26
RAB5B-206ENST00000549505 TRIM41Q8WV44 630 aa16.51■□□□□ 0.23
RAB5B-206ENST00000549505 PRDM2Q13029 1718 aa16.45■□□□□ 0.22
RAB5B-206ENST00000549505 EEA1Q15075 1411 aa16.44■□□□□ 0.22
RAB5B-206ENST00000549505 ABCC8Q09428 1581 aa16.44■□□□□ 0.22
RAB5B-206ENST00000549505 BIVM-ERCC5R4GMW8 1640 aa16.41■□□□□ 0.22
RAB5B-206ENST00000549505 CFTRP13569 1480 aa16.39■□□□□ 0.21
RAB5B-206ENST00000549505 WRNQ14191 1432 aaPredicted RBP eCLIP16.37■□□□□ 0.21
RAB5B-206ENST00000549505 TOP2BQ02880 1626 aa16.36■□□□□ 0.21
RAB5B-206ENST00000549505 SYNJ1O43426 1573 aa16.35■□□□□ 0.21
RAB5B-206ENST00000549505 CC2D2AQ9P2K1 1620 aa16.35■□□□□ 0.21
RAB5B-206ENST00000549505 LOC105371045A0A1W2PR82 267 aa16.26■□□□□ 0.19
RAB5B-206ENST00000549505 KIF21BO75037 1637 aa16.24■□□□□ 0.19
RAB5B-206ENST00000549505 SOGA1O94964 1423 aa16.19■□□□□ 0.18
RAB5B-206ENST00000549505 CADPSQ9ULU8 1353 aa16.18■□□□□ 0.18
RAB5B-206ENST00000549505 CUX1P39880 1505 aa16.17■□□□□ 0.18
RAB5B-206ENST00000549505 TNIKQ9UKE5 1360 aa16.14■□□□□ 0.17
RAB5B-206ENST00000549505 RUSC2Q8N2Y8 1516 aa16.1■□□□□ 0.17
RAB5B-206ENST00000549505 GOLGA3Q08378 1498 aa16.1■□□□□ 0.17
RAB5B-206ENST00000549505 CEP164Q9UPV0 1460 aa16.1■□□□□ 0.17
RAB5B-206ENST00000549505 LAMC3Q9Y6N6 1575 aa16.09■□□□□ 0.17
RAB5B-206ENST00000549505 ERICH3Q5RHP9 1530 aa16.09■□□□□ 0.17
RAB5B-206ENST00000549505 CSRNP3Q8WYN3 585 aa16.08■□□□□ 0.16
RAB5B-206ENST00000549505 PRXQ9BXM0 1461 aa16.03■□□□□ 0.16
RAB5B-206ENST00000549505 DNMBPQ6XZF7 1577 aa16■□□□□ 0.15
RAB5B-206ENST00000549505 FAM9AQ8IZU1 332 aaPredicted RBP15.97■□□□□ 0.15
RAB5B-206ENST00000549505 CEP162Q5TB80 1403 aa15.97■□□□□ 0.15
RAB5B-206ENST00000549505 FANCD2Q9BXW9 1451 aa15.97■□□□□ 0.15
RAB5B-206ENST00000549505 KIF27Q86VH2 1401 aa15.94■□□□□ 0.14
RAB5B-206ENST00000549505 TRIM26Q12899 539 aaPredicted RBP15.92■□□□□ 0.14
RAB5B-206ENST00000549505 WDR97A6NE52 1622 aa15.91■□□□□ 0.14
RAB5B-206ENST00000549505 ABCA10Q8WWZ4 1543 aa15.89■□□□□ 0.13
RAB5B-206ENST00000549505 RAPGEF2Q9Y4G8 1499 aa15.88■□□□□ 0.13
RAB5B-206ENST00000549505 FGD5Q6ZNL6 1462 aa15.88■□□□□ 0.13
RAB5B-206ENST00000549505 TOPBP1Q92547 1522 aa15.88■□□□□ 0.13
RAB5B-206ENST00000549505 PDS5BQ9NTI5 1447 aa15.83■□□□□ 0.12
RAB5B-206ENST00000549505 NESP48681 1621 aa15.81■□□□□ 0.12
RAB5B-206ENST00000549505 URB2Q14146 1524 aaKnown RBP15.8■□□□□ 0.12
RAB5B-206ENST00000549505 POLA1P09884 1462 aaPredicted RBP15.8■□□□□ 0.12
RAB5B-206ENST00000549505 IGF1RP08069 1367 aa15.79■□□□□ 0.12
RAB5B-206ENST00000549505 CUL7Q14999 1698 aa15.79■□□□□ 0.12
RAB5B-206ENST00000549505 ABCA5Q8WWZ7 1642 aa15.77■□□□□ 0.12
RAB5B-206ENST00000549505 CLIP1P30622 1438 aa15.76■□□□□ 0.11
RAB5B-206ENST00000549505 KIF21AQ7Z4S6 1674 aa15.76■□□□□ 0.11
RAB5B-206ENST00000549505 CUX2O14529 1486 aa15.76■□□□□ 0.11
RAB5B-206ENST00000549505 VPS8Q8N3P4 1428 aa15.76■□□□□ 0.11
RAB5B-206ENST00000549505 HRCP23327 699 aa15.75■□□□□ 0.11
RAB5B-206ENST00000549505 PCGF6Q9BYE7 350 aa15.75■□□□□ 0.11
RAB5B-206ENST00000549505 TARBP1Q13395 1621 aaKnown RBP15.72■□□□□ 0.11
RAB5B-206ENST00000549505 ARAP1Q96P48 1450 aa15.69■□□□□ 0.1
RAB5B-206ENST00000549505 UBTFP17480 764 aaKnown RBP15.67■□□□□ 0.1
RAB5B-206ENST00000549505 WDR62O43379 1518 aa15.66■□□□□ 0.1
RAB5B-206ENST00000549505 MAP3K1Q13233 1512 aa15.66■□□□□ 0.1
RAB5B-206ENST00000549505 MRC2Q9UBG0 1479 aa15.65■□□□□ 0.1
RAB5B-206ENST00000549505 CARMIL1Q5VZK9 1371 aa15.65■□□□□ 0.1
RAB5B-206ENST00000549505 RAD54L2Q9Y4B4 1467 aa15.63■□□□□ 0.09
RAB5B-206ENST00000549505 ARHGAP35Q9NRY4 1499 aa15.62■□□□□ 0.09
RAB5B-206ENST00000549505 CTTNBP2Q8WZ74 1663 aa15.61■□□□□ 0.09
RAB5B-206ENST00000549505 EFCAB5A4FU69 1503 aa15.6■□□□□ 0.09
RAB5B-206ENST00000549505 DNAJC5BQ9UF47 199 aa15.58■□□□□ 0.08
RAB5B-206ENST00000549505 PBRM1Q86U86 1689 aa15.55■□□□□ 0.08
RAB5B-206ENST00000549505 GAPVD1Q14C86 1478 aa15.55■□□□□ 0.08
RAB5B-206ENST00000549505 AQRO60306 1485 aaKnown RBP eCLIP15.54■□□□□ 0.087e-8■■■■■ 33.4
RAB5B-206ENST00000549505 THOC2Q8NI27 1593 aaKnown RBP15.54■□□□□ 0.08
RAB5B-206ENST00000549505 IFT140Q96RY7 1462 aa15.53■□□□□ 0.08
RAB5B-206ENST00000549505 SAMD9Q5K651 1589 aa15.53■□□□□ 0.08
RAB5B-206ENST00000549505 EHMT2Q96KQ7 1210 aa15.52■□□□□ 0.08
RAB5B-206ENST00000549505 ADAMTS12P58397 1594 aa15.5■□□□□ 0.07
RAB5B-206ENST00000549505 ZEB1P37275 1124 aaPredicted RBP15.5■□□□□ 0.07
RAB5B-206ENST00000549505 CFAP43Q8NDM7 1665 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms