RNA–Protein interactions for RNA: ENST00000534400.5

BRPF3-211, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 5 BASIC

Gene BRPF3, Length 4,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-211ENST00000534400 NISCHQ9Y2I1 1504 aa19.93■□□□□ 0.78
BRPF3-211ENST00000534400 DCAF8L2P0C7V8 631 aa19.11■□□□□ 0.65
BRPF3-211ENST00000534400 ABCC9O60706 1549 aa17.56■□□□□ 0.4
BRPF3-211ENST00000534400 SHROOM4Q9ULL8 1493 aa17.47■□□□□ 0.39
BRPF3-211ENST00000534400 SUPT5HO00267 1087 aaKnown RBP17.27■□□□□ 0.35
BRPF3-211ENST00000534400 CCDC180Q9P1Z9 1646 aa17■□□□□ 0.31
BRPF3-211ENST00000534400 PABPN1Q86U42 306 aaKnown RBP eCLIP16.96■□□□□ 0.31
BRPF3-211ENST00000534400 FAM9AQ8IZU1 332 aaPredicted RBP16.67■□□□□ 0.26
BRPF3-211ENST00000534400 RB1CC1Q8TDY2 1594 aa16.63■□□□□ 0.25
BRPF3-211ENST00000534400 NACADO15069 1562 aa16.49■□□□□ 0.23
BRPF3-211ENST00000534400 ZCCHC6Q5VYS8 1495 aaKnown RBP16.45■□□□□ 0.22
BRPF3-211ENST00000534400 SCRIBQ14160 1630 aa16.39■□□□□ 0.21
BRPF3-211ENST00000534400 TRIM41Q8WV44 630 aa16.24■□□□□ 0.19
BRPF3-211ENST00000534400 EHMT2Q96KQ7 1210 aa16.19■□□□□ 0.18
BRPF3-211ENST00000534400 APLP2Q06481 763 aa16.16■□□□□ 0.18
BRPF3-211ENST00000534400 DCAF1Q9Y4B6 1507 aa16.11■□□□□ 0.17
BRPF3-211ENST00000534400 MYO15BQ96JP2 1530 aa15.99■□□□□ 0.15
BRPF3-211ENST00000534400 UBTFP17480 764 aaKnown RBP15.97■□□□□ 0.15
BRPF3-211ENST00000534400 RANGAP1P46060 587 aaPredicted RBP15.95■□□□□ 0.14
BRPF3-211ENST00000534400 ATP1B4Q9UN42 357 aaPredicted RBP15.94■□□□□ 0.14
BRPF3-211ENST00000534400 FBLN2P98095 1184 aa15.87■□□□□ 0.13
BRPF3-211ENST00000534400 TTBK1Q5TCY1 1321 aaPredicted RBP15.78■□□□□ 0.12
BRPF3-211ENST00000534400 BAZ1BQ9UIG0 1483 aaKnown RBP15.76■□□□□ 0.11
BRPF3-211ENST00000534400 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.76■□□□□ 0.11
BRPF3-211ENST00000534400 HNRNPUL2Q1KMD3 747 aaKnown RBP15.76■□□□□ 0.11
BRPF3-211ENST00000534400 ERCC6Q03468 1493 aa15.73■□□□□ 0.11
BRPF3-211ENST00000534400 BAZ1AQ9NRL2 1556 aaPredicted RBP15.69■□□□□ 0.1
BRPF3-211ENST00000534400 CECR2Q9BXF3 1484 aa15.66■□□□□ 0.1
BRPF3-211ENST00000534400 MYT1LQ9UL68 1186 aa15.6■□□□□ 0.09
BRPF3-211ENST00000534400 SMARCA2P51531 1590 aa15.56■□□□□ 0.08
BRPF3-211ENST00000534400 RSF1Q96T23 1441 aaPredicted RBP15.54■□□□□ 0.08
BRPF3-211ENST00000534400 NPM1P06748 294 aaKnown RBP eCLIP15.51■□□□□ 0.07
BRPF3-211ENST00000534400 CHMP7Q8WUX9 453 aaPredicted RBP15.51■□□□□ 0.07
BRPF3-211ENST00000534400 PDS5BQ9NTI5 1447 aa15.5■□□□□ 0.07
BRPF3-211ENST00000534400 CHIC1Q5VXU3 224 aa15.47■□□□□ 0.07
BRPF3-211ENST00000534400 PCGF6Q9BYE7 350 aa15.44■□□□□ 0.06
BRPF3-211ENST00000534400 ATAD2BQ9ULI0 1458 aa15.35■□□□□ 0.05
BRPF3-211ENST00000534400 CSRNP3Q8WYN3 585 aa15.35■□□□□ 0.05
BRPF3-211ENST00000534400 CADPSQ9ULU8 1353 aa15.32■□□□□ 0.04
BRPF3-211ENST00000534400 MROH2BQ7Z745 1585 aa15.3■□□□□ 0.04
BRPF3-211ENST00000534400 EIF4G1Q04637 1599 aaKnown RBP15.3■□□□□ 0.04
BRPF3-211ENST00000534400 CDK11AQ9UQ88 783 aaPredicted RBP15.28■□□□□ 0.04
BRPF3-211ENST00000534400 NCAPD3P42695 1498 aa15.23■□□□□ 0.03
BRPF3-211ENST00000534400 WRNQ14191 1432 aaPredicted RBP eCLIP15.21■□□□□ 0.02
BRPF3-211ENST00000534400 DNAJC5BQ9UF47 199 aa15.2■□□□□ 0.02
BRPF3-211ENST00000534400 SMARCA4P51532 1647 aa15.2■□□□□ 0.02
BRPF3-211ENST00000534400 P3H3Q8IVL6 736 aa15.19■□□□□ 0.02
BRPF3-211ENST00000534400 CEP164Q9UPV0 1460 aa15.14■□□□□ 0.01
BRPF3-211ENST00000534400 CC2D2AQ9P2K1 1620 aa15.13■□□□□ 0.01
BRPF3-211ENST00000534400 KIF27Q86VH2 1401 aa15.13■□□□□ 0.01
BRPF3-211ENST00000534400 CCDC88BA6NC98 1476 aa15.11■□□□□ 0.01
BRPF3-211ENST00000534400 LOC105371045A0A1W2PR82 267 aa15.1■□□□□ 0.01
BRPF3-211ENST00000534400 TOP2AP11388 1531 aaKnown RBP15.1■□□□□ 0.01
BRPF3-211ENST00000534400 ARID3CA6NKF2 412 aa15.1■□□□□ 0.01
BRPF3-211ENST00000534400 ESF1Q9H501 851 aaKnown RBP15.06■□□□□ 0
BRPF3-211ENST00000534400 ABCC8Q09428 1581 aa15.06■□□□□ 0
BRPF3-211ENST00000534400 ITGAEP38570 1179 aa15.06■□□□□ 0
BRPF3-211ENST00000534400 SOGA1O94964 1423 aa15.06■□□□□ 0
BRPF3-211ENST00000534400 TRHP20396 242 aaPredicted RBP15.05■□□□□ -0
BRPF3-211ENST00000534400 FANCD2Q9BXW9 1451 aa15.04■□□□□ -0
BRPF3-211ENST00000534400 BICRAQ9NZM4 1560 aa15.04■□□□□ -0
BRPF3-211ENST00000534400 OSCARQ8IYS5 282 aa15.03■□□□□ -0
BRPF3-211ENST00000534400 EEA1Q15075 1411 aa15.01□□□□□ -0.01
BRPF3-211ENST00000534400 WIZO95785 1651 aa15.01□□□□□ -0.01
BRPF3-211ENST00000534400 PPARGC1BQ86YN6 1023 aaKnown RBP14.98□□□□□ -0.01
BRPF3-211ENST00000534400 TDRD9Q8NDG6 1382 aaKnown RBP14.98□□□□□ -0.01
BRPF3-211ENST00000534400 CUX2O14529 1486 aa14.98□□□□□ -0.01
BRPF3-211ENST00000534400 FAM50AQ14320 339 aaKnown RBP14.97□□□□□ -0.01
BRPF3-211ENST00000534400 ZNF777Q9ULD5 760 aaPredicted RBP14.95□□□□□ -0.02
BRPF3-211ENST00000534400 PLEKHD1A6NEE1 506 aa14.94□□□□□ -0.02
BRPF3-211ENST00000534400 HMGXB3Q12766 1538 aa14.94□□□□□ -0.02
BRPF3-211ENST00000534400 CARMIL1Q5VZK9 1371 aa14.9□□□□□ -0.02
BRPF3-211ENST00000534400 KCNH8Q96L42 1107 aa14.9□□□□□ -0.02
BRPF3-211ENST00000534400 CCER1Q8TC90 406 aaPredicted RBP14.89□□□□□ -0.03
BRPF3-211ENST00000534400 CARMIL2Q6F5E8 1435 aa14.87□□□□□ -0.03
BRPF3-211ENST00000534400 MRC2Q9UBG0 1479 aa14.82□□□□□ -0.04
BRPF3-211ENST00000534400 TRIM52Q96A61 297 aa14.81□□□□□ -0.04
BRPF3-211ENST00000534400 CYB5RLQ6IPT4 315 aa14.79□□□□□ -0.04
BRPF3-211ENST00000534400 TSPY4P0CV99 314 aa14.79□□□□□ -0.04
BRPF3-211ENST00000534400 TSPY10P0CW01 314 aa14.79□□□□□ -0.04
BRPF3-211ENST00000534400 CFTRP13569 1480 aa14.79□□□□□ -0.04
BRPF3-211ENST00000534400 NESP48681 1621 aa14.78□□□□□ -0.04
BRPF3-211ENST00000534400 MTUS2Q5JR59 1369 aa14.78□□□□□ -0.04
BRPF3-211ENST00000534400 JPH4Q96JJ6 628 aa14.76□□□□□ -0.05
BRPF3-211ENST00000534400 GOLGA3Q08378 1498 aa14.74□□□□□ -0.05
BRPF3-211ENST00000534400 BCANQ96GW7 911 aa14.73□□□□□ -0.05
BRPF3-211ENST00000534400 PLPPR3Q6T4P5 718 aa14.73□□□□□ -0.05
BRPF3-211ENST00000534400 LAMC3Q9Y6N6 1575 aa14.73□□□□□ -0.05
BRPF3-211ENST00000534400 ARID4BQ4LE39 1312 aaPredicted RBP14.72□□□□□ -0.05
BRPF3-211ENST00000534400 UNC13AQ9UPW8 1703 aa14.71□□□□□ -0.05
BRPF3-211ENST00000534400 ZEB1P37275 1124 aaPredicted RBP14.71□□□□□ -0.06
BRPF3-211ENST00000534400 STAG3Q9UJ98 1225 aa14.71□□□□□ -0.06
BRPF3-211ENST00000534400 CLIP1P30622 1438 aa14.7□□□□□ -0.06
BRPF3-211ENST00000534400 TRIM26Q12899 539 aaPredicted RBP14.69□□□□□ -0.06
BRPF3-211ENST00000534400 IFT140Q96RY7 1462 aa14.69□□□□□ -0.06
BRPF3-211ENST00000534400 GAPVD1Q14C86 1478 aa14.68□□□□□ -0.06
BRPF3-211ENST00000534400 PELP1Q8IZL8 1130 aaKnown RBP14.67□□□□□ -0.06
BRPF3-211ENST00000534400 FGD5Q6ZNL6 1462 aa14.66□□□□□ -0.06
BRPF3-211ENST00000534400 HRCP23327 699 aa14.64□□□□□ -0.07
BRPF3-211ENST00000534400 YTHDC1Q96MU7 727 aaKnown RBP14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms