RNA–Protein interactions for RNA: ENST00000533048.5

NXF1-214, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-214ENST00000533048 NISCHQ9Y2I1 1504 aa34.76■■■■□ 3.16
NXF1-214ENST00000533048 CCDC180Q9P1Z9 1646 aa30.65■■■□□ 2.5
NXF1-214ENST00000533048 ZCCHC6Q5VYS8 1495 aaKnown RBP29.16■■■□□ 2.26
NXF1-214ENST00000533048 ABCC9O60706 1549 aa29.14■■■□□ 2.25
NXF1-214ENST00000533048 DCAF1Q9Y4B6 1507 aa28.88■■■□□ 2.21
NXF1-214ENST00000533048 MYO15BQ96JP2 1530 aa28.74■■■□□ 2.19
NXF1-214ENST00000533048 NACADO15069 1562 aa28.6■■■□□ 2.17
NXF1-214ENST00000533048 DCAF8L2P0C7V8 631 aa28.5■■■□□ 2.15
NXF1-214ENST00000533048 RB1CC1Q8TDY2 1594 aa28.42■■■□□ 2.14
NXF1-214ENST00000533048 SCRIBQ14160 1630 aa27.92■■■□□ 2.06
NXF1-214ENST00000533048 UNC13AQ9UPW8 1703 aa27.84■■■□□ 2.05
NXF1-214ENST00000533048 SHROOM4Q9ULL8 1493 aa27.76■■■□□ 2.03
NXF1-214ENST00000533048 BICRAQ9NZM4 1560 aa27.57■■■□□ 2
NXF1-214ENST00000533048 PABPN1Q86U42 306 aaKnown RBP eCLIP27.28■■□□□ 1.969e-7■□□□□ 8.8
NXF1-214ENST00000533048 CECR2Q9BXF3 1484 aa26.95■■□□□ 1.91
NXF1-214ENST00000533048 BAZ1AQ9NRL2 1556 aaPredicted RBP26.9■■□□□ 1.9
NXF1-214ENST00000533048 SMARCA4P51532 1647 aa26.83■■□□□ 1.88
NXF1-214ENST00000533048 MROH2BQ7Z745 1585 aa26.79■■□□□ 1.88
NXF1-214ENST00000533048 EIF4G1Q04637 1599 aaKnown RBP26.76■■□□□ 1.87
NXF1-214ENST00000533048 RSF1Q96T23 1441 aaPredicted RBP26.74■■□□□ 1.87
NXF1-214ENST00000533048 PEG3Q9GZU2 1588 aa26.63■■□□□ 1.85
NXF1-214ENST00000533048 WIZO95785 1651 aa26.53■■□□□ 1.84
NXF1-214ENST00000533048 SMARCA2P51531 1590 aa26.5■■□□□ 1.83
NXF1-214ENST00000533048 ATAD2BQ9ULI0 1458 aa26.48■■□□□ 1.83
NXF1-214ENST00000533048 SUPT5HO00267 1087 aaKnown RBP26.45■■□□□ 1.82
NXF1-214ENST00000533048 CC2D2AQ9P2K1 1620 aa26.45■■□□□ 1.82
NXF1-214ENST00000533048 NCAPD3P42695 1498 aa26.37■■□□□ 1.81
NXF1-214ENST00000533048 HMGXB3Q12766 1538 aa26.34■■□□□ 1.81
NXF1-214ENST00000533048 TOP2AP11388 1531 aaKnown RBP26.33■■□□□ 1.81
NXF1-214ENST00000533048 BAZ1BQ9UIG0 1483 aaKnown RBP26.28■■□□□ 1.8
NXF1-214ENST00000533048 DNAJC5BQ9UF47 199 aa26.05■■□□□ 1.76
NXF1-214ENST00000533048 CCDC88BA6NC98 1476 aa25.97■■□□□ 1.75
NXF1-214ENST00000533048 CFTRP13569 1480 aa25.64■■□□□ 1.69
NXF1-214ENST00000533048 CADPSQ9ULU8 1353 aa25.59■■□□□ 1.69
NXF1-214ENST00000533048 PRDM2Q13029 1718 aa25.57■■□□□ 1.68
NXF1-214ENST00000533048 LAMC3Q9Y6N6 1575 aa25.56■■□□□ 1.68
NXF1-214ENST00000533048 NESP48681 1621 aa25.45■■□□□ 1.67
NXF1-214ENST00000533048 PDS5BQ9NTI5 1447 aa25.31■■□□□ 1.64
NXF1-214ENST00000533048 FANCD2Q9BXW9 1451 aa25.31■■□□□ 1.64
NXF1-214ENST00000533048 ABCC8Q09428 1581 aa25.23■■□□□ 1.63
NXF1-214ENST00000533048 KIF21AQ7Z4S6 1674 aa25.22■■□□□ 1.63
NXF1-214ENST00000533048 CEP164Q9UPV0 1460 aa25.21■■□□□ 1.63
NXF1-214ENST00000533048 CHIC1Q5VXU3 224 aa25.2■■□□□ 1.62
NXF1-214ENST00000533048 WRNQ14191 1432 aaPredicted RBP eCLIP25.18■■□□□ 1.62
NXF1-214ENST00000533048 SYNJ1O43426 1573 aa25.11■■□□□ 1.61
NXF1-214ENST00000533048 BIVM-ERCC5R4GMW8 1640 aa25.11■■□□□ 1.61
NXF1-214ENST00000533048 TOP2BQ02880 1626 aa25.1■■□□□ 1.61
NXF1-214ENST00000533048 CUX1P39880 1505 aa25.1■■□□□ 1.61
NXF1-214ENST00000533048 DNMBPQ6XZF7 1577 aa25.06■■□□□ 1.6
NXF1-214ENST00000533048 ERCC6Q03468 1493 aa25.04■■□□□ 1.6
NXF1-214ENST00000533048 MRC2Q9UBG0 1479 aa25.03■■□□□ 1.6
NXF1-214ENST00000533048 URB2Q14146 1524 aaKnown RBP25.03■■□□□ 1.6
NXF1-214ENST00000533048 TOPBP1Q92547 1522 aa25.01■■□□□ 1.59
NXF1-214ENST00000533048 THOC2Q8NI27 1593 aaKnown RBP24.99■■□□□ 1.59
NXF1-214ENST00000533048 TRIM41Q8WV44 630 aa24.99■■□□□ 1.59
NXF1-214ENST00000533048 WDR62O43379 1518 aa24.96■■□□□ 1.59
NXF1-214ENST00000533048 FGD5Q6ZNL6 1462 aa24.88■■□□□ 1.57
NXF1-214ENST00000533048 POLA1P09884 1462 aaPredicted RBP24.84■■□□□ 1.57
NXF1-214ENST00000533048 CUX2O14529 1486 aa24.72■■□□□ 1.55
NXF1-214ENST00000533048 WDR97A6NE52 1622 aa24.72■■□□□ 1.55
NXF1-214ENST00000533048 TARBP1Q13395 1621 aaKnown RBP24.71■■□□□ 1.55
NXF1-214ENST00000533048 ABCA10Q8WWZ4 1543 aa24.71■■□□□ 1.55
NXF1-214ENST00000533048 SOGA1O94964 1423 aa24.69■■□□□ 1.54
NXF1-214ENST00000533048 RAD54L2Q9Y4B4 1467 aa24.67■■□□□ 1.54
NXF1-214ENST00000533048 IFT140Q96RY7 1462 aa24.66■■□□□ 1.54
NXF1-214ENST00000533048 EEA1Q15075 1411 aa24.65■■□□□ 1.54
NXF1-214ENST00000533048 KIF27Q86VH2 1401 aa24.59■■□□□ 1.53
NXF1-214ENST00000533048 RUSC2Q8N2Y8 1516 aa24.57■■□□□ 1.52
NXF1-214ENST00000533048 ABCA5Q8WWZ7 1642 aa24.57■■□□□ 1.52
NXF1-214ENST00000533048 ZNF608Q9ULD9 1512 aaPredicted RBP24.46■■□□□ 1.51
NXF1-214ENST00000533048 GAPVD1Q14C86 1478 aa24.45■■□□□ 1.51
NXF1-214ENST00000533048 TDRD9Q8NDG6 1382 aaKnown RBP24.45■■□□□ 1.5
NXF1-214ENST00000533048 EIF4G3O43432 1585 aaKnown RBP24.45■■□□□ 1.5
NXF1-214ENST00000533048 ERICH3Q5RHP9 1530 aa24.43■■□□□ 1.5
NXF1-214ENST00000533048 CSRNP3Q8WYN3 585 aa24.41■■□□□ 1.5
NXF1-214ENST00000533048 PBRM1Q86U86 1689 aa24.4■■□□□ 1.5
NXF1-214ENST00000533048 IGF1RP08069 1367 aa24.4■■□□□ 1.5
NXF1-214ENST00000533048 AQRO60306 1485 aaKnown RBP eCLIP24.38■■□□□ 1.493e-10■■■■□ 22.5
NXF1-214ENST00000533048 FAM9AQ8IZU1 332 aaPredicted RBP24.38■■□□□ 1.49
NXF1-214ENST00000533048 KIF21BO75037 1637 aa24.37■■□□□ 1.49
NXF1-214ENST00000533048 GRIN2BQ13224 1484 aa24.36■■□□□ 1.49
NXF1-214ENST00000533048 PRXQ9BXM0 1461 aa24.36■■□□□ 1.49
NXF1-214ENST00000533048 CUL7Q14999 1698 aa24.36■■□□□ 1.49
NXF1-214ENST00000533048 ADAMTS12P58397 1594 aa24.26■■□□□ 1.47
NXF1-214ENST00000533048 CARMIL1Q5VZK9 1371 aa24.25■■□□□ 1.47
NXF1-214ENST00000533048 MAGI1Q96QZ7 1491 aaPredicted RBP24.25■■□□□ 1.47
NXF1-214ENST00000533048 GOLGA3Q08378 1498 aa24.23■■□□□ 1.47
NXF1-214ENST00000533048 SNAPC4Q5SXM2 1469 aa24.21■■□□□ 1.47
NXF1-214ENST00000533048 RAPGEF2Q9Y4G8 1499 aa24.21■■□□□ 1.47
NXF1-214ENST00000533048 FHAD1B1AJZ9 1412 aa24.21■■□□□ 1.47
NXF1-214ENST00000533048 SYNJ2O15056 1496 aa24.13■■□□□ 1.45
NXF1-214ENST00000533048 LOC105371045A0A1W2PR82 267 aa24.09■■□□□ 1.45
NXF1-214ENST00000533048 GRIN2AQ12879 1464 aa24.07■■□□□ 1.44
NXF1-214ENST00000533048 TNIKQ9UKE5 1360 aa24.05■■□□□ 1.44
NXF1-214ENST00000533048 CTTNBP2Q8WZ74 1663 aa24■■□□□ 1.43
NXF1-214ENST00000533048 CHD1O14646 1710 aa23.98■■□□□ 1.43
NXF1-214ENST00000533048 UBTFP17480 764 aaKnown RBP23.96■■□□□ 1.43
NXF1-214ENST00000533048 NUP160Q12769 1436 aa23.95■■□□□ 1.42
NXF1-214ENST00000533048 EHMT2Q96KQ7 1210 aa23.95■■□□□ 1.42
NXF1-214ENST00000533048 CHMP7Q8WUX9 453 aaPredicted RBP23.94■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 120.2 ms