RNA–Protein interactions for RNA: ENST00000524439.5

C11orf58-202, Transcript of chromosome 11 open reading frame 58, humanhuman

TSL 3

Gene C11orf58, Length 405 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf58-202ENST00000524439 NISCHQ9Y2I1 1504 aa32.74■■■□□ 2.83
C11orf58-202ENST00000524439 ABCC9O60706 1549 aa29.51■■■□□ 2.32
C11orf58-202ENST00000524439 CCDC180Q9P1Z9 1646 aa29.41■■■□□ 2.3
C11orf58-202ENST00000524439 RB1CC1Q8TDY2 1594 aa28.05■■■□□ 2.08
C11orf58-202ENST00000524439 NACADO15069 1562 aa27.82■■■□□ 2.04
C11orf58-202ENST00000524439 DCAF8L2P0C7V8 631 aa27.74■■■□□ 2.03
C11orf58-202ENST00000524439 DNAJC5BQ9UF47 199 aa27.74■■■□□ 2.03
C11orf58-202ENST00000524439 PABPN1Q86U42 306 aaKnown RBP eCLIP27.48■■□□□ 1.991e-5■□□□□ 8.6
C11orf58-202ENST00000524439 UNC13AQ9UPW8 1703 aa27.43■■□□□ 1.98
C11orf58-202ENST00000524439 MYO15BQ96JP2 1530 aa27.38■■□□□ 1.97
C11orf58-202ENST00000524439 BICRAQ9NZM4 1560 aa27.22■■□□□ 1.95
C11orf58-202ENST00000524439 ZCCHC6Q5VYS8 1495 aaKnown RBP27.11■■□□□ 1.93
C11orf58-202ENST00000524439 DCAF1Q9Y4B6 1507 aa27.01■■□□□ 1.91
C11orf58-202ENST00000524439 SCRIBQ14160 1630 aa26.83■■□□□ 1.89
C11orf58-202ENST00000524439 SHROOM4Q9ULL8 1493 aa26.82■■□□□ 1.88
C11orf58-202ENST00000524439 CC2D2AQ9P2K1 1620 aa26.65■■□□□ 1.86
C11orf58-202ENST00000524439 CECR2Q9BXF3 1484 aa26.59■■□□□ 1.85
C11orf58-202ENST00000524439 EIF4G1Q04637 1599 aaKnown RBP26.56■■□□□ 1.84
C11orf58-202ENST00000524439 NCAPD3P42695 1498 aa25.67■■□□□ 1.7
C11orf58-202ENST00000524439 ATAD2BQ9ULI0 1458 aa25.6■■□□□ 1.69
C11orf58-202ENST00000524439 SMARCA4P51532 1647 aa25.56■■□□□ 1.68
C11orf58-202ENST00000524439 SMARCA2P51531 1590 aa25.53■■□□□ 1.68
C11orf58-202ENST00000524439 DNAJC5Q9H3Z4 198 aa25.52■■□□□ 1.68
C11orf58-202ENST00000524439 ERCC6Q03468 1493 aa25.51■■□□□ 1.67
C11orf58-202ENST00000524439 HMGXB3Q12766 1538 aa25.48■■□□□ 1.67
C11orf58-202ENST00000524439 CUX2O14529 1486 aa25.44■■□□□ 1.66
C11orf58-202ENST00000524439 BAZ1AQ9NRL2 1556 aaPredicted RBP25.43■■□□□ 1.66
C11orf58-202ENST00000524439 BAZ1BQ9UIG0 1483 aaKnown RBP25.37■■□□□ 1.65
C11orf58-202ENST00000524439 NESP48681 1621 aa25.34■■□□□ 1.65
C11orf58-202ENST00000524439 PEG3Q9GZU2 1588 aa25.29■■□□□ 1.64
C11orf58-202ENST00000524439 MROH2BQ7Z745 1585 aa25.24■■□□□ 1.63
C11orf58-202ENST00000524439 LAMC3Q9Y6N6 1575 aa25.13■■□□□ 1.61
C11orf58-202ENST00000524439 THOC2Q8NI27 1593 aaKnown RBP25.07■■□□□ 1.6
C11orf58-202ENST00000524439 KIF21AQ7Z4S6 1674 aa25.01■■□□□ 1.59
C11orf58-202ENST00000524439 PDS5BQ9NTI5 1447 aa24.99■■□□□ 1.59
C11orf58-202ENST00000524439 WIZO95785 1651 aa24.94■■□□□ 1.58
C11orf58-202ENST00000524439 CADPSQ9ULU8 1353 aa24.91■■□□□ 1.58
C11orf58-202ENST00000524439 MRC2Q9UBG0 1479 aa24.78■■□□□ 1.56
C11orf58-202ENST00000524439 WDR62O43379 1518 aa24.71■■□□□ 1.55
C11orf58-202ENST00000524439 RSF1Q96T23 1441 aaPredicted RBP24.69■■□□□ 1.54
C11orf58-202ENST00000524439 CEP164Q9UPV0 1460 aa24.67■■□□□ 1.54
C11orf58-202ENST00000524439 FANCD2Q9BXW9 1451 aa24.64■■□□□ 1.53
C11orf58-202ENST00000524439 TOP2AP11388 1531 aaKnown RBP24.61■■□□□ 1.53
C11orf58-202ENST00000524439 CFTRP13569 1480 aa24.6■■□□□ 1.53
C11orf58-202ENST00000524439 URB2Q14146 1524 aaKnown RBP24.44■■□□□ 1.5
C11orf58-202ENST00000524439 TRIM41Q8WV44 630 aa24.42■■□□□ 1.5
C11orf58-202ENST00000524439 PRDM2Q13029 1718 aa24.38■■□□□ 1.49
C11orf58-202ENST00000524439 CCDC88BA6NC98 1476 aa24.33■■□□□ 1.49
C11orf58-202ENST00000524439 OSCARQ8IYS5 282 aa24.29■■□□□ 1.48
C11orf58-202ENST00000524439 IFT140Q96RY7 1462 aa24.18■■□□□ 1.46
C11orf58-202ENST00000524439 TOPBP1Q92547 1522 aa24.16■■□□□ 1.46
C11orf58-202ENST00000524439 ZNF608Q9ULD9 1512 aaPredicted RBP24.15■■□□□ 1.46
C11orf58-202ENST00000524439 ABCC8Q09428 1581 aa24.09■■□□□ 1.45
C11orf58-202ENST00000524439 DNMBPQ6XZF7 1577 aa24.07■■□□□ 1.44
C11orf58-202ENST00000524439 EIF4G3O43432 1585 aaKnown RBP24.02■■□□□ 1.44
C11orf58-202ENST00000524439 RIMBP3CA6NJZ7 1639 aa23.99■■□□□ 1.43
C11orf58-202ENST00000524439 RIMBP3BA6NNM3 1639 aa23.99■■□□□ 1.43
C11orf58-202ENST00000524439 RIMBP3Q9UFD9 1639 aa23.99■■□□□ 1.43
C11orf58-202ENST00000524439 TARBP1Q13395 1621 aaKnown RBP23.95■■□□□ 1.42
C11orf58-202ENST00000524439 AQRO60306 1485 aaKnown RBP eCLIP23.94■■□□□ 1.422e-6■■□□□ 14.2
C11orf58-202ENST00000524439 POLA1P09884 1462 aaPredicted RBP23.91■■□□□ 1.42
C11orf58-202ENST00000524439 ARHGEF11O15085 1522 aa23.89■■□□□ 1.42
C11orf58-202ENST00000524439 CHD1O14646 1710 aa23.87■■□□□ 1.41
C11orf58-202ENST00000524439 RAD54L2Q9Y4B4 1467 aa23.83■■□□□ 1.41
C11orf58-202ENST00000524439 FBLN2P98095 1184 aa23.83■■□□□ 1.41
C11orf58-202ENST00000524439 SOGA1O94964 1423 aa23.81■■□□□ 1.4
C11orf58-202ENST00000524439 TDRD9Q8NDG6 1382 aaKnown RBP23.78■■□□□ 1.4
C11orf58-202ENST00000524439 FGD5Q6ZNL6 1462 aa23.75■■□□□ 1.39
C11orf58-202ENST00000524439 CYB5RLQ6IPT4 315 aa23.75■■□□□ 1.39
C11orf58-202ENST00000524439 CUX1P39880 1505 aa23.72■■□□□ 1.39
C11orf58-202ENST00000524439 SNAPC4Q5SXM2 1469 aa23.68■■□□□ 1.38
C11orf58-202ENST00000524439 WDR97A6NE52 1622 aa23.68■■□□□ 1.38
C11orf58-202ENST00000524439 ARAP1Q96P48 1450 aa23.65■■□□□ 1.38
C11orf58-202ENST00000524439 CHMP7Q8WUX9 453 aaPredicted RBP23.62■■□□□ 1.37
C11orf58-202ENST00000524439 GRIN2BQ13224 1484 aa23.61■■□□□ 1.37
C11orf58-202ENST00000524439 MAGI1Q96QZ7 1491 aaPredicted RBP23.61■■□□□ 1.37
C11orf58-202ENST00000524439 SUPT5HO00267 1087 aaKnown RBP23.6■■□□□ 1.37
C11orf58-202ENST00000524439 CLASP1Q7Z460 1538 aa23.56■■□□□ 1.36
C11orf58-202ENST00000524439 SYNJ1O43426 1573 aa23.56■■□□□ 1.36
C11orf58-202ENST00000524439 TRHP20396 242 aaPredicted RBP23.53■■□□□ 1.36
C11orf58-202ENST00000524439 SYNJ2O15056 1496 aa23.53■■□□□ 1.36
C11orf58-202ENST00000524439 PBRM1Q86U86 1689 aa23.52■■□□□ 1.36
C11orf58-202ENST00000524439 GAPVD1Q14C86 1478 aa23.51■■□□□ 1.35
C11orf58-202ENST00000524439 ABCA10Q8WWZ4 1543 aa23.47■■□□□ 1.35
C11orf58-202ENST00000524439 ABCA5Q8WWZ7 1642 aa23.44■■□□□ 1.34
C11orf58-202ENST00000524439 WRNQ14191 1432 aaPredicted RBP eCLIP23.38■■□□□ 1.33
C11orf58-202ENST00000524439 TOP2BQ02880 1626 aa23.32■■□□□ 1.32
C11orf58-202ENST00000524439 BIVM-ERCC5R4GMW8 1640 aa23.31■■□□□ 1.32
C11orf58-202ENST00000524439 GRIN2AQ12879 1464 aa23.3■■□□□ 1.32
C11orf58-202ENST00000524439 ADAMTS12P58397 1594 aa23.27■■□□□ 1.32
C11orf58-202ENST00000524439 CEP170Q5SW79 1584 aa23.23■■□□□ 1.31
C11orf58-202ENST00000524439 FHAD1B1AJZ9 1412 aa23.21■■□□□ 1.31
C11orf58-202ENST00000524439 NUP160Q12769 1436 aa23.21■■□□□ 1.31
C11orf58-202ENST00000524439 ERCC6L2Q5T890 1561 aa23.21■■□□□ 1.31
C11orf58-202ENST00000524439 ERICH3Q5RHP9 1530 aa23.18■■□□□ 1.3
C11orf58-202ENST00000524439 SHROOM2Q13796 1616 aa23.11■■□□□ 1.29
C11orf58-202ENST00000524439 PRG4Q92954 1404 aaPredicted RBP23.02■■□□□ 1.28
C11orf58-202ENST00000524439 JPH4Q96JJ6 628 aa22.99■■□□□ 1.27
C11orf58-202ENST00000524439 RUSC2Q8N2Y8 1516 aa22.95■■□□□ 1.26
C11orf58-202ENST00000524439 AEBP2Q6ZN18 517 aaPredicted RBP22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms