Protein–RNA interactions for Protein: Q00839

HNRNPU, Heterogeneous nuclear ribonucleoprotein U, humanhuman

Known RBP eCLIP

Length 825 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPUQ00839 SMC4-221ENST00000489573 1553 ntTSL 1 (best)29.02■■■□□ 2.242e-22■■■■■ 68.1
HNRNPUQ00839 SMC4-209ENST00000468653 1756 ntTSL 225.62■■□□□ 1.692e-22■■■■■ 68.1
HNRNPUQ00839 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.552e-22■■■■■ 68.1
HNRNPUQ00839 SMC4-211ENST00000469858 1971 ntTSL 224.6■■□□□ 1.532e-22■■■■■ 68.1
HNRNPUQ00839 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC21.68■■□□□ 1.062e-22■■■■■ 68.1
HNRNPUQ00839 SMC4-202ENST00000357388 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.342e-22■■■■■ 68.1
HNRNPUQ00839 SMC4-210ENST00000469762 3998 ntTSL 2 BASIC14.38□□□□□ -0.112e-22■■■■■ 68.1
HNRNPUQ00839 SMC4-213ENST00000472282 667 ntTSL 311.8□□□□□ -0.522e-22■■■■■ 68.1
HNRNPUQ00839 SMC4-214ENST00000472991 582 ntTSL 511.8□□□□□ -0.522e-22■■■■■ 68.1
HNRNPUQ00839 SMC4-212ENST00000470240 724 ntTSL 310.94□□□□□ -0.662e-22■■■■■ 68.1
HNRNPUQ00839 SMC4-219ENST00000487747 637 ntTSL 58.24□□□□□ -1.092e-22■■■■■ 68.1
HNRNPUQ00839 SMC4-227ENST00000497984 563 ntTSL 57.92□□□□□ -1.142e-22■■■■■ 68.1
HNRNPUQ00839 SMC4-208ENST00000467468 566 ntTSL 46.88□□□□□ -1.312e-22■■■■■ 68.1
HNRNPUQ00839 MIR15B-201ENST00000385045 98 ntBASIC3.53□□□□□ -1.842e-22■■■■■ 68.1
HNRNPUQ00839 FP236383.1-201ENST00000623860 2498 ntTSL 2 BASIC16.59■□□□□ 0.251e-68■■■■■ 65.9
HNRNPUQ00839 PLCXD1-208ENST00000445062 555 ntTSL 426.08■■□□□ 1.771e-11■■■■■ 36.3
HNRNPUQ00839 PLCXD1-205ENST00000429181 469 ntTSL 418.89■□□□□ 0.611e-11■■■■■ 36.3
HNRNPUQ00839 PLCXD1-201ENST00000381657 5507 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.321e-11■■■■■ 36.3
HNRNPUQ00839 MERTK-205ENST00000449344 771 ntTSL 313.13□□□□□ -0.316e-11■■■■■ 34.5
HNRNPUQ00839 ANKRD11-204ENST00000378332 1982 ntTSL 228.64■■■□□ 2.181e-10■■■■■ 33.9
HNRNPUQ00839 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC28.06■■■□□ 2.081e-10■■■■■ 33.9
HNRNPUQ00839 ANKRD11-211ENST00000566973 442 ntTSL 224.43■■□□□ 1.51e-10■■■■■ 33.9
HNRNPUQ00839 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.441e-10■■■■■ 33.9
HNRNPUQ00839 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.381e-10■■■■■ 33.9
HNRNPUQ00839 ANKRD11-215ENST00000568512 294 ntTSL 212.15□□□□□ -0.461e-10■■■■■ 33.9
HNRNPUQ00839 LRRC41-205ENST00000498402 2068 ntTSL 224.19■■□□□ 1.462e-9■■■■■ 29.3
HNRNPUQ00839 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.872e-9■■■■■ 29.3
HNRNPUQ00839 LRRC41-206ENST00000615587 2842 ntTSL 1 (best) BASIC18.06■□□□□ 0.482e-9■■■■■ 29.3
HNRNPUQ00839 LRRC41-207ENST00000617190 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.182e-9■■■■■ 29.3
HNRNPUQ00839 FP671120.1-201ENST00000623664 2498 ntTSL 2 BASIC16.59■□□□□ 0.251e-7■■■■■ 29.3
HNRNPUQ00839 MTRNR2L4-201ENST00000399974 1762 ntAPPRIS P1 BASIC14.37□□□□□ -0.119e-9■■■■■ 27.1
HNRNPUQ00839 BABAM2-205ENST00000379629 865 ntTSL 37.62□□□□□ -1.195e-8■■■■□ 25.5
HNRNPUQ00839 PRKCA-203ENST00000578063 1733 ntTSL 1 (best)24.9■■□□□ 1.588e-8■■■■□ 25.4
HNRNPUQ00839 PRKCA-201ENST00000284384 2718 ntTSL 510.64□□□□□ -0.718e-8■■■■□ 25.4
HNRNPUQ00839 PRKCA-202ENST00000413366 8751 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.848e-8■■■■□ 25.4
HNRNPUQ00839 ZNF275-202ENST00000370251 6320 ntTSL 2 BASIC14.86□□□□□ -0.035e-8■■■■□ 25
HNRNPUQ00839 LRMDA-201ENST00000372499 899 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.597e-8■■■■□ 24.8
HNRNPUQ00839 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC8.64□□□□□ -1.031e-11■■■■□ 24.8
HNRNPUQ00839 ZNF580-206ENST00000592881 1019 ntTSL 326.42■■□□□ 1.821e-8■■■■□ 24.6
HNRNPUQ00839 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.481e-8■■■■□ 24.6
HNRNPUQ00839 PLCXD1-211ENST00000484611 540 ntTSL 419.63■□□□□ 0.733e-7■■■■□ 24.4
HNRNPUQ00839 PLCXD1-206ENST00000430923 587 ntAPPRIS ALT2 TSL 218.71■□□□□ 0.593e-7■■■■□ 24.4
HNRNPUQ00839 PLCXD1-203ENST00000399012 5287 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.23e-7■■■■□ 24.4
HNRNPUQ00839 HFM1-204ENST00000448819 540 ntTSL 511.4□□□□□ -0.588e-8■■■■□ 24.4
HNRNPUQ00839 HFM1-202ENST00000427444 672 ntTSL 510.18□□□□□ -0.788e-8■■■■□ 24.4
HNRNPUQ00839 HFM1-208ENST00000488023 1699 ntTSL 55.11□□□□□ -1.598e-8■■■■□ 24.4
HNRNPUQ00839 HFM1-207ENST00000481900 2020 ntTSL 54.55□□□□□ -1.688e-8■■■■□ 24.4
HNRNPUQ00839 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.18e-8■■■■□ 24.4
HNRNPUQ00839 PLXNB2-212ENST00000496720 913 ntTSL 322.36■■□□□ 1.172e-7■■■■□ 23.3
HNRNPUQ00839 PLXNB2-202ENST00000411680 704 ntTSL 221.41■■□□□ 1.022e-7■■■■□ 23.3
HNRNPUQ00839 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.62e-7■■■■□ 23.3
HNRNPUQ00839 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.562e-7■■■■□ 23.3
HNRNPUQ00839 PLXNB2-206ENST00000434732 253 ntTSL 217.45■□□□□ 0.382e-7■■■■□ 23.3
HNRNPUQ00839 AC025627.3-201ENST00000582078 182 ntBASIC1.16□□□□□ -2.224e-7■■■■□ 23.2
HNRNPUQ00839 STK40-208ENST00000482458 900 ntTSL 330.51■■■□□ 2.475e-8■■■■□ 23.1
HNRNPUQ00839 STK40-205ENST00000460017 511 ntTSL 523.48■■□□□ 1.355e-8■■■■□ 23.1
HNRNPUQ00839 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.115e-8■■■■□ 23.1
HNRNPUQ00839 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.955e-8■■■■□ 23.1
HNRNPUQ00839 STK40-203ENST00000373130 3628 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.565e-8■■■■□ 23.1
HNRNPUQ00839 FREM1-202ENST00000380880 7324 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.446e-7■■■■□ 23
HNRNPUQ00839 FREM1-201ENST00000380875 6126 ntTSL 1 (best)12.25□□□□□ -0.456e-7■■■■□ 23
HNRNPUQ00839 FREM1-204ENST00000422223 10086 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.536e-7■■■■□ 23
HNRNPUQ00839 MCEE-201ENST00000244217 835 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.095e-7■■■■□ 22.9
HNRNPUQ00839 MCEE-203ENST00000462609 633 ntTSL 310.02□□□□□ -0.815e-7■■■■□ 22.9
HNRNPUQ00839 MCEE-202ENST00000413592 523 ntTSL 29.58□□□□□ -0.885e-7■■■■□ 22.9
HNRNPUQ00839 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.794e-7■■■■□ 22.8
HNRNPUQ00839 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.614e-7■■■■□ 22.8
HNRNPUQ00839 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.544e-7■■■■□ 22.8
HNRNPUQ00839 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC18.53■□□□□ 0.561e-10■■■■□ 22.7
HNRNPUQ00839 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC8.36□□□□□ -1.076e-11■■■■□ 22.4
HNRNPUQ00839 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC28.73■■■□□ 2.196e-7■■■■□ 22.2
HNRNPUQ00839 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.566e-7■■■■□ 22.2
HNRNPUQ00839 FAM120B-201ENST00000476287 5155 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.446e-7■■■■□ 22.2
HNRNPUQ00839 FAM120B-203ENST00000537664 3212 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.66e-7■■■■□ 22.2
HNRNPUQ00839 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.781e-7■■■■□ 21.9
HNRNPUQ00839 CUX1-202ENST00000292538 2930 ntTSL 1 (best) BASIC15.88■□□□□ 0.131e-6■■■■□ 21.8
HNRNPUQ00839 CUX1-210ENST00000497815 947 ntTSL 215.58■□□□□ 0.081e-6■■■■□ 21.8
HNRNPUQ00839 CUX1-212ENST00000547394 2878 ntTSL 2 BASIC15.38■□□□□ 0.051e-6■■■■□ 21.8
HNRNPUQ00839 CUX1-204ENST00000393824 2331 ntTSL 2 BASIC15.17■□□□□ 0.021e-6■■■■□ 21.8
HNRNPUQ00839 CUX1-205ENST00000425244 2776 ntTSL 2 BASIC14.79□□□□□ -0.041e-6■■■■□ 21.8
HNRNPUQ00839 CUX1-221ENST00000622516 2990 ntTSL 1 (best) BASIC14.73□□□□□ -0.051e-6■■■■□ 21.8
HNRNPUQ00839 CUX1-206ENST00000437600 3031 ntTSL 1 (best) BASIC13.19□□□□□ -0.31e-6■■■■□ 21.8
HNRNPUQ00839 CUX1-203ENST00000360264 13762 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.361e-6■■■■□ 21.8
HNRNPUQ00839 CUX1-220ENST00000607092 559 ntTSL 37.49□□□□□ -1.211e-6■■■■□ 21.8
HNRNPUQ00839 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.651e-6■■■■□ 21.8
HNRNPUQ00839 LGR5-202ENST00000536515 2664 ntTSL 1 (best) BASIC18.23■□□□□ 0.511e-6■■■■□ 21.8
HNRNPUQ00839 LGR5-206ENST00000550851 4095 ntTSL 216.06■□□□□ 0.161e-6■■■■□ 21.8
HNRNPUQ00839 LGR5-203ENST00000540815 2800 ntTSL 1 (best) BASIC15.53■□□□□ 0.081e-6■■■■□ 21.8
HNRNPUQ00839 EPB41L1-213ENST00000447825 896 ntTSL 329.99■■■□□ 2.396e-7■■■■□ 21.7
HNRNPUQ00839 EPB41L1-204ENST00000373945 763 ntTSL 223.76■■□□□ 1.396e-7■■■■□ 21.7
HNRNPUQ00839 EPB41L1-207ENST00000406771 652 ntTSL 521.07■□□□□ 0.966e-7■■■■□ 21.7
HNRNPUQ00839 EPB41L1-209ENST00000430276 896 ntTSL 519.01■□□□□ 0.636e-7■■■■□ 21.7
HNRNPUQ00839 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.596e-7■■■■□ 21.7
HNRNPUQ00839 EPB41L1-206ENST00000373950 3631 ntTSL 5 BASIC17.91■□□□□ 0.466e-7■■■■□ 21.7
HNRNPUQ00839 EPB41L1-212ENST00000441639 5967 ntTSL 5 BASIC16.9■□□□□ 0.36e-7■■■■□ 21.7
HNRNPUQ00839 EPB41L1-215ENST00000452261 769 ntTSL 516.04■□□□□ 0.166e-7■■■■□ 21.7
HNRNPUQ00839 EPB41L1-210ENST00000432589 210 ntTSL 315.54■□□□□ 0.086e-7■■■■□ 21.7
HNRNPUQ00839 EPB41L1-218ENST00000628415 3287 ntTSL 2 BASIC15.43■□□□□ 0.066e-7■■■■□ 21.7
HNRNPUQ00839 EPB41L1-205ENST00000373946 6327 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.016e-7■■■■□ 21.7
HNRNPUQ00839 EPB41L1-208ENST00000427533 460 ntTSL 312.06□□□□□ -0.486e-7■■■■□ 21.7
Retrieved 100 of 2,288 protein–RNA pairs in 23.5 ms