RNA–Protein interactions for RNA: ENST00000266674.9

LGR5-201, Transcript of leucine rich repeat containing G protein-coupled receptor 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LGR5, Length 4,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5-201ENST00000266674 DCAF8L2P0C7V8 631 aa23.34■■□□□ 1.33
LGR5-201ENST00000266674 NISCHQ9Y2I1 1504 aa23.13■■□□□ 1.29
LGR5-201ENST00000266674 SUPT5HO00267 1087 aaKnown RBP22.92■■□□□ 1.26
LGR5-201ENST00000266674 SHROOM4Q9ULL8 1493 aa22.45■■□□□ 1.18
LGR5-201ENST00000266674 PCGF6Q9BYE7 350 aa21.96■■□□□ 1.11
LGR5-201ENST00000266674 EHMT2Q96KQ7 1210 aa21.94■■□□□ 1.1
LGR5-201ENST00000266674 PELP1Q8IZL8 1130 aaKnown RBP21.8■■□□□ 1.08
LGR5-201ENST00000266674 FAM9AQ8IZU1 332 aaPredicted RBP21.54■■□□□ 1.04
LGR5-201ENST00000266674 ZEB1P37275 1124 aaPredicted RBP21.52■■□□□ 1.03
LGR5-201ENST00000266674 CENPBP07199 599 aaPredicted RBP21.43■■□□□ 1.02
LGR5-201ENST00000266674 APLP2Q06481 763 aa21.4■■□□□ 1.02
LGR5-201ENST00000266674 TTBK1Q5TCY1 1321 aaPredicted RBP21.29■■□□□ 1
LGR5-201ENST00000266674 CCER1Q8TC90 406 aaPredicted RBP21.25■□□□□ 0.99
LGR5-201ENST00000266674 HRCP23327 699 aa21.24■□□□□ 0.99
LGR5-201ENST00000266674 TRIM41Q8WV44 630 aa21.19■□□□□ 0.98
LGR5-201ENST00000266674 MYT1Q01538 1121 aa21.1■□□□□ 0.97
LGR5-201ENST00000266674 TRIM26Q12899 539 aaPredicted RBP21.02■□□□□ 0.96
LGR5-201ENST00000266674 YTHDC1Q96MU7 727 aaKnown RBP20.89■□□□□ 0.93
LGR5-201ENST00000266674 ERICH6Q7L0X2 663 aa20.87■□□□□ 0.93
LGR5-201ENST00000266674 CHIC1Q5VXU3 224 aa20.82■□□□□ 0.92
LGR5-201ENST00000266674 RANGAP1P46060 587 aaPredicted RBP20.79■□□□□ 0.92
LGR5-201ENST00000266674 PPARGC1BQ86YN6 1023 aaKnown RBP20.78■□□□□ 0.92
LGR5-201ENST00000266674 UBTFP17480 764 aaKnown RBP20.77■□□□□ 0.92
LGR5-201ENST00000266674 LOC105371045A0A1W2PR82 267 aa20.74■□□□□ 0.91
LGR5-201ENST00000266674 NEFLP07196 543 aa20.66■□□□□ 0.9
LGR5-201ENST00000266674 ATP1B4Q9UN42 357 aaPredicted RBP20.44■□□□□ 0.86
LGR5-201ENST00000266674 DIEXFQ68CQ4 756 aaKnown RBP20.34■□□□□ 0.85
LGR5-201ENST00000266674 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.32■□□□□ 0.84
LGR5-201ENST00000266674 HNRNPUL2Q1KMD3 747 aaKnown RBP20.26■□□□□ 0.83
LGR5-201ENST00000266674 GTF3C3Q9Y5Q9 886 aa20.15■□□□□ 0.82
LGR5-201ENST00000266674 ITGAEP38570 1179 aa20.14■□□□□ 0.81
LGR5-201ENST00000266674 ACIN1Q9UKV3 1341 aaKnown RBP19.95■□□□□ 0.78
LGR5-201ENST00000266674 DAXXQ9UER7 740 aaPredicted RBP19.85■□□□□ 0.77
LGR5-201ENST00000266674 ZNF316A6NFI3 1004 aaPredicted RBP19.84■□□□□ 0.77
LGR5-201ENST00000266674 POLR3GLQ9BT43 218 aa19.82■□□□□ 0.76
LGR5-201ENST00000266674 BCANQ96GW7 911 aa19.75■□□□□ 0.75
LGR5-201ENST00000266674 CNGB1Q14028 1251 aaPredicted RBP19.72■□□□□ 0.75
LGR5-201ENST00000266674 RTL5Q5HYW3 569 aaPredicted RBP19.72■□□□□ 0.75
LGR5-201ENST00000266674 DCAF1Q9Y4B6 1507 aa19.69■□□□□ 0.74
LGR5-201ENST00000266674 NEUROD1Q13562 356 aa19.59■□□□□ 0.73
LGR5-201ENST00000266674 FAM50AQ14320 339 aaKnown RBP19.59■□□□□ 0.73
LGR5-201ENST00000266674 ANP32CO43423 234 aa19.56■□□□□ 0.72
LGR5-201ENST00000266674 SCAF1Q9H7N4 1312 aaKnown RBP19.54■□□□□ 0.72
LGR5-201ENST00000266674 CDK11AQ9UQ88 783 aaPredicted RBP19.54■□□□□ 0.72
LGR5-201ENST00000266674 CLSPNQ9HAW4 1339 aa19.44■□□□□ 0.7
LGR5-201ENST00000266674 CSRNP3Q8WYN3 585 aa19.43■□□□□ 0.7
LGR5-201ENST00000266674 TRIM52Q96A61 297 aa19.4■□□□□ 0.7
LGR5-201ENST00000266674 MYO15BQ96JP2 1530 aa19.3■□□□□ 0.68
LGR5-201ENST00000266674 FKBP8Q14318 412 aa19.3■□□□□ 0.68
LGR5-201ENST00000266674 MYT1LQ9UL68 1186 aa19.27■□□□□ 0.67
LGR5-201ENST00000266674 ZCCHC6Q5VYS8 1495 aaKnown RBP19.25■□□□□ 0.67
LGR5-201ENST00000266674 PABPN1Q86U42 306 aaKnown RBP eCLIP19.22■□□□□ 0.67
LGR5-201ENST00000266674 ABCC9O60706 1549 aa19.22■□□□□ 0.67
LGR5-201ENST00000266674 MIER1Q8N108 512 aa19.2■□□□□ 0.66
LGR5-201ENST00000266674 ANP32AP39687 249 aaKnown RBP19.18■□□□□ 0.66
LGR5-201ENST00000266674 ZNF326Q5BKZ1 582 aaKnown RBP19.18■□□□□ 0.66
LGR5-201ENST00000266674 SLC4A1APQ9BWU0 796 aaKnown RBP19.15■□□□□ 0.66
LGR5-201ENST00000266674 DDX10Q13206 875 aaKnown RBP19.13■□□□□ 0.65
LGR5-201ENST00000266674 HNRNPUQ00839 825 aaKnown RBP eCLIP19.09■□□□□ 0.651e-6■■■■□ 21.8
LGR5-201ENST00000266674 P3H3Q8IVL6 736 aa19.05■□□□□ 0.64
LGR5-201ENST00000266674 NPM2Q86SE8 214 aaKnown RBP19.02■□□□□ 0.64
LGR5-201ENST00000266674 TONSLQ96HA7 1378 aa19.02■□□□□ 0.63
LGR5-201ENST00000266674 CCDC180Q9P1Z9 1646 aa19.01■□□□□ 0.63
LGR5-201ENST00000266674 FAM9BQ8IZU0 186 aa18.93■□□□□ 0.62
LGR5-201ENST00000266674 SCRIBQ14160 1630 aa18.92■□□□□ 0.62
LGR5-201ENST00000266674 CANXP27824 592 aaKnown RBP18.89■□□□□ 0.61
LGR5-201ENST00000266674 EIF5BO60841 1220 aaKnown RBP18.87■□□□□ 0.61
LGR5-201ENST00000266674 NBR1Q14596 966 aa18.86■□□□□ 0.61
LGR5-201ENST00000266674 ANP32EQ9BTT0 268 aa18.85■□□□□ 0.61
LGR5-201ENST00000266674 CCDC136Q96JN2 1154 aa18.85■□□□□ 0.61
LGR5-201ENST00000266674 ZBTB47Q9UFB7 747 aaPredicted RBP18.84■□□□□ 0.61
LGR5-201ENST00000266674 ARID3CA6NKF2 412 aa18.81■□□□□ 0.6
LGR5-201ENST00000266674 CLIP1P30622 1438 aa18.81■□□□□ 0.6
LGR5-201ENST00000266674 IRX6P78412 446 aaPredicted RBP18.81■□□□□ 0.6
LGR5-201ENST00000266674 CEP162Q5TB80 1403 aa18.8■□□□□ 0.6
LGR5-201ENST00000266674 HIRIP3Q9BW71 556 aaPredicted RBP18.78■□□□□ 0.6
LGR5-201ENST00000266674 MRS2Q9HD23 443 aa18.78■□□□□ 0.6
LGR5-201ENST00000266674 RSF1Q96T23 1441 aaPredicted RBP18.75■□□□□ 0.59
LGR5-201ENST00000266674 TMC1Q8TDI8 760 aa18.72■□□□□ 0.59
LGR5-201ENST00000266674 SALL2Q9Y467 1007 aaPredicted RBP18.72■□□□□ 0.59
LGR5-201ENST00000266674 ZNF777Q9ULD5 760 aaPredicted RBP18.71■□□□□ 0.59
LGR5-201ENST00000266674 EEA1Q15075 1411 aa18.69■□□□□ 0.58
LGR5-201ENST00000266674 SUPT16HQ9Y5B9 1047 aaKnown RBP18.69■□□□□ 0.58
LGR5-201ENST00000266674 BCL11AQ9H165 835 aa18.67■□□□□ 0.58
LGR5-201ENST00000266674 GOLGA3Q08378 1498 aa18.66■□□□□ 0.58
LGR5-201ENST00000266674 CHIC2Q9UKJ5 165 aa18.65■□□□□ 0.58
LGR5-201ENST00000266674 FBLN2P98095 1184 aa18.65■□□□□ 0.58
LGR5-201ENST00000266674 TNIKQ9UKE5 1360 aa18.64■□□□□ 0.57
LGR5-201ENST00000266674 UPF2Q9HAU5 1272 aaKnown RBP18.64■□□□□ 0.57
LGR5-201ENST00000266674 EIF4G2P78344 907 aaKnown RBP eCLIP18.62■□□□□ 0.57
LGR5-201ENST00000266674 NEFMP07197 916 aa18.6■□□□□ 0.57
LGR5-201ENST00000266674 ANP32BQ92688 251 aaKnown RBP18.58■□□□□ 0.57
LGR5-201ENST00000266674 HSP90AA1P07900 732 aaKnown RBP18.55■□□□□ 0.56
LGR5-201ENST00000266674 GLIPR1L2Q4G1C9 344 aa18.55■□□□□ 0.56
LGR5-201ENST00000266674 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.55■□□□□ 0.56
LGR5-201ENST00000266674 MTUS2Q5JR59 1369 aa18.55■□□□□ 0.56
LGR5-201ENST00000266674 PPP4R2Q9NY27 417 aa18.47■□□□□ 0.55
LGR5-201ENST00000266674 ARXQ96QS3 562 aa18.46■□□□□ 0.55
LGR5-201ENST00000266674 WRNQ14191 1432 aaPredicted RBP eCLIP18.45■□□□□ 0.542e-10■■■■■ 91.9
LGR5-201ENST00000266674 WDR43Q15061 677 aaKnown RBP eCLIP18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms