RNA–Protein interactions for RNA: ENST00000615587.4

LRRC41-206, Transcript of leucine rich repeat containing 41, humanhuman

TSL 1 (best) BASIC

Gene LRRC41, Length 2,842 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC41-206ENST00000615587 NISCHQ9Y2I1 1504 aa23.54■■□□□ 1.36
LRRC41-206ENST00000615587 HRCP23327 699 aa22.11■■□□□ 1.13
LRRC41-206ENST00000615587 PPARGC1BQ86YN6 1023 aaKnown RBP21.88■■□□□ 1.09
LRRC41-206ENST00000615587 PCGF6Q9BYE7 350 aa21.68■■□□□ 1.06
LRRC41-206ENST00000615587 PELP1Q8IZL8 1130 aaKnown RBP21.55■■□□□ 1.04
LRRC41-206ENST00000615587 SUPT5HO00267 1087 aaKnown RBP21.48■■□□□ 1.03
LRRC41-206ENST00000615587 SHROOM4Q9ULL8 1493 aa21.45■■□□□ 1.02
LRRC41-206ENST00000615587 MYO15BQ96JP2 1530 aa21.3■■□□□ 1
LRRC41-206ENST00000615587 SCAF1Q9H7N4 1312 aaKnown RBP21.18■□□□□ 0.98
LRRC41-206ENST00000615587 CHIC1Q5VXU3 224 aa21.08■□□□□ 0.97
LRRC41-206ENST00000615587 LOC105371045A0A1W2PR82 267 aa20.8■□□□□ 0.92
LRRC41-206ENST00000615587 TRIM26Q12899 539 aaPredicted RBP20.72■□□□□ 0.91
LRRC41-206ENST00000615587 MYT1Q01538 1121 aa20.7■□□□□ 0.9
LRRC41-206ENST00000615587 DCAF1Q9Y4B6 1507 aa20.69■□□□□ 0.9
LRRC41-206ENST00000615587 ZEB1P37275 1124 aaPredicted RBP20.53■□□□□ 0.88
LRRC41-206ENST00000615587 NEUROD1Q13562 356 aa20.51■□□□□ 0.87
LRRC41-206ENST00000615587 ACIN1Q9UKV3 1341 aaKnown RBP20.48■□□□□ 0.87
LRRC41-206ENST00000615587 CCDC180Q9P1Z9 1646 aa20.46■□□□□ 0.87
LRRC41-206ENST00000615587 GTF3C3Q9Y5Q9 886 aa20.42■□□□□ 0.86
LRRC41-206ENST00000615587 CENPBP07199 599 aaPredicted RBP20.12■□□□□ 0.81
LRRC41-206ENST00000615587 DIEXFQ68CQ4 756 aaKnown RBP20.02■□□□□ 0.8
LRRC41-206ENST00000615587 EHMT2Q96KQ7 1210 aa20.02■□□□□ 0.8
LRRC41-206ENST00000615587 DCAF8L2P0C7V8 631 aa20.02■□□□□ 0.79
LRRC41-206ENST00000615587 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.01■□□□□ 0.79
LRRC41-206ENST00000615587 ZCCHC6Q5VYS8 1495 aaKnown RBP19.97■□□□□ 0.79
LRRC41-206ENST00000615587 FAM9AQ8IZU1 332 aaPredicted RBP19.93■□□□□ 0.78
LRRC41-206ENST00000615587 CCER1Q8TC90 406 aaPredicted RBP19.9■□□□□ 0.78
LRRC41-206ENST00000615587 YTHDC1Q96MU7 727 aaKnown RBP19.9■□□□□ 0.78
LRRC41-206ENST00000615587 TRIM41Q8WV44 630 aa19.7■□□□□ 0.74
LRRC41-206ENST00000615587 BCL11AQ9H165 835 aa19.66■□□□□ 0.74
LRRC41-206ENST00000615587 TTBK1Q5TCY1 1321 aaPredicted RBP19.57■□□□□ 0.72
LRRC41-206ENST00000615587 MIER1Q8N108 512 aa19.54■□□□□ 0.72
LRRC41-206ENST00000615587 ZNF316A6NFI3 1004 aaPredicted RBP19.51■□□□□ 0.71
LRRC41-206ENST00000615587 ANP32EQ9BTT0 268 aa19.43■□□□□ 0.7
LRRC41-206ENST00000615587 CSRNP3Q8WYN3 585 aa19.35■□□□□ 0.69
LRRC41-206ENST00000615587 TSHZ2Q9NRE2 1034 aa19.32■□□□□ 0.68
LRRC41-206ENST00000615587 SUPT16HQ9Y5B9 1047 aaKnown RBP19.31■□□□□ 0.68
LRRC41-206ENST00000615587 RSF1Q96T23 1441 aaPredicted RBP19.1■□□□□ 0.65
LRRC41-206ENST00000615587 RB1CC1Q8TDY2 1594 aa19.09■□□□□ 0.65
LRRC41-206ENST00000615587 BCANQ96GW7 911 aa19.04■□□□□ 0.64
LRRC41-206ENST00000615587 PRKCSHP14314 528 aaPredicted RBP19.02■□□□□ 0.64
LRRC41-206ENST00000615587 ABCC9O60706 1549 aa19.01■□□□□ 0.63
LRRC41-206ENST00000615587 HNRNPUL2Q1KMD3 747 aaKnown RBP19.01■□□□□ 0.63
LRRC41-206ENST00000615587 CLSPNQ9HAW4 1339 aa18.95■□□□□ 0.62
LRRC41-206ENST00000615587 SCRIBQ14160 1630 aa18.91■□□□□ 0.62
LRRC41-206ENST00000615587 RBM19Q9Y4C8 960 aaKnown RBP18.84■□□□□ 0.61
LRRC41-206ENST00000615587 WRNQ14191 1432 aaPredicted RBP eCLIP18.84■□□□□ 0.615e-7■□□□□ 10
LRRC41-206ENST00000615587 CEP162Q5TB80 1403 aa18.82■□□□□ 0.6
LRRC41-206ENST00000615587 KCNH8Q96L42 1107 aa18.82■□□□□ 0.6
LRRC41-206ENST00000615587 FKBP8Q14318 412 aa18.8■□□□□ 0.6
LRRC41-206ENST00000615587 MSH5O43196 834 aa18.74■□□□□ 0.59
LRRC41-206ENST00000615587 ITGAEP38570 1179 aa18.74■□□□□ 0.59
LRRC41-206ENST00000615587 UBTFP17480 764 aaKnown RBP18.71■□□□□ 0.59
LRRC41-206ENST00000615587 CECR2Q9BXF3 1484 aa18.61■□□□□ 0.57
LRRC41-206ENST00000615587 TNIKQ9UKE5 1360 aa18.59■□□□□ 0.57
LRRC41-206ENST00000615587 SOGA1O94964 1423 aa18.56■□□□□ 0.56
LRRC41-206ENST00000615587 CCDC88BA6NC98 1476 aa18.56■□□□□ 0.56
LRRC41-206ENST00000615587 ABCC8Q09428 1581 aa18.54■□□□□ 0.56
LRRC41-206ENST00000615587 ERICH6Q7L0X2 663 aa18.52■□□□□ 0.56
LRRC41-206ENST00000615587 NEFLP07196 543 aa18.52■□□□□ 0.55
LRRC41-206ENST00000615587 ANO8Q9HCE9 1232 aaPredicted RBP18.51■□□□□ 0.55
LRRC41-206ENST00000615587 MROH2BQ7Z745 1585 aa18.49■□□□□ 0.55
LRRC41-206ENST00000615587 TRIM52Q96A61 297 aa18.46■□□□□ 0.55
LRRC41-206ENST00000615587 RUSC2Q8N2Y8 1516 aa18.46■□□□□ 0.55
LRRC41-206ENST00000615587 DEKP35659 375 aaKnown RBP18.45■□□□□ 0.54
LRRC41-206ENST00000615587 RANGAP1P46060 587 aaPredicted RBP18.45■□□□□ 0.54
LRRC41-206ENST00000615587 DHX57Q6P158 1386 aaKnown RBP18.44■□□□□ 0.54
LRRC41-206ENST00000615587 WIZO95785 1651 aa18.43■□□□□ 0.54
LRRC41-206ENST00000615587 APLP2Q06481 763 aa18.39■□□□□ 0.53
LRRC41-206ENST00000615587 DDX10Q13206 875 aaKnown RBP18.39■□□□□ 0.53
LRRC41-206ENST00000615587 FANCIQ9NVI1 1328 aa18.36■□□□□ 0.53
LRRC41-206ENST00000615587 IRX6P78412 446 aaPredicted RBP18.36■□□□□ 0.53
LRRC41-206ENST00000615587 EIF4G1Q04637 1599 aaKnown RBP18.33■□□□□ 0.52
LRRC41-206ENST00000615587 SALL2Q9Y467 1007 aaPredicted RBP18.3■□□□□ 0.52
LRRC41-206ENST00000615587 CDK11AQ9UQ88 783 aaPredicted RBP18.29■□□□□ 0.52
LRRC41-206ENST00000615587 GOLGA3Q08378 1498 aa18.29■□□□□ 0.52
LRRC41-206ENST00000615587 NBR1Q14596 966 aa18.28■□□□□ 0.52
LRRC41-206ENST00000615587 CCDC136Q96JN2 1154 aa18.27■□□□□ 0.52
LRRC41-206ENST00000615587 CLIP1P30622 1438 aa18.27■□□□□ 0.52
LRRC41-206ENST00000615587 HIRIP3Q9BW71 556 aaPredicted RBP18.27■□□□□ 0.51
LRRC41-206ENST00000615587 VPS8Q8N3P4 1428 aa18.2■□□□□ 0.5
LRRC41-206ENST00000615587 MYT1LQ9UL68 1186 aa18.18■□□□□ 0.5
LRRC41-206ENST00000615587 EEA1Q15075 1411 aa18.16■□□□□ 0.5
LRRC41-206ENST00000615587 RTN4Q9NQC3 1192 aaKnown RBP18.15■□□□□ 0.5
LRRC41-206ENST00000615587 PAK3O75914 559 aaPredicted RBP18.13■□□□□ 0.49
LRRC41-206ENST00000615587 NACADO15069 1562 aa18.13■□□□□ 0.49
LRRC41-206ENST00000615587 BAZ1AQ9NRL2 1556 aaPredicted RBP18.13■□□□□ 0.49
LRRC41-206ENST00000615587 PPP1R15AO75807 674 aaPredicted RBP18.13■□□□□ 0.49
LRRC41-206ENST00000615587 KANK4Q5T7N3 995 aaPredicted RBP18.13■□□□□ 0.49
LRRC41-206ENST00000615587 IL27Q8NEV9 243 aa18.11■□□□□ 0.49
LRRC41-206ENST00000615587 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.11■□□□□ 0.49
LRRC41-206ENST00000615587 ANP32CO43423 234 aa18.1■□□□□ 0.49
LRRC41-206ENST00000615587 SIN3AQ96ST3 1273 aa18.07■□□□□ 0.48
LRRC41-206ENST00000615587 NOP58Q9Y2X3 529 aaKnown RBP18.07■□□□□ 0.48
LRRC41-206ENST00000615587 HNRNPUQ00839 825 aaKnown RBP eCLIP18.06■□□□□ 0.482e-9■■■■■ 29.3
LRRC41-206ENST00000615587 CCER2I3L3R5 266 aa18.05■□□□□ 0.48
LRRC41-206ENST00000615587 CEP164Q9UPV0 1460 aa18.05■□□□□ 0.48
LRRC41-206ENST00000615587 B4GALNT3Q6L9W6 998 aa18.03■□□□□ 0.48
LRRC41-206ENST00000615587 WDR97A6NE52 1622 aa18■□□□□ 0.47
LRRC41-206ENST00000615587 KIF21BO75037 1637 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms