RNA–Protein interactions for RNA: ENST00000481900.5

HFM1-207, Transcript of HFM1, ATP dependent DNA helicase homolog, humanhuman

TSL 5

Gene HFM1, Length 2,020 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1-207ENST00000481900 AEBP2Q6ZN18 517 aaPredicted RBP17.17■□□□□ 0.34
HFM1-207ENST00000481900 POTEDQ86YR6 584 aa16.95■□□□□ 0.3
HFM1-207ENST00000481900 CHIC1Q5VXU3 224 aa16.21■□□□□ 0.19
HFM1-207ENST00000481900 SENP3Q9H4L4 574 aaPredicted RBP15.06■□□□□ 0
HFM1-207ENST00000481900 PHF23Q9BUL5 403 aaPredicted RBP14.58□□□□□ -0.08
HFM1-207ENST00000481900 FOXD1Q16676 465 aa14.11□□□□□ -0.15
HFM1-207ENST00000481900 MSH5O43196 834 aa13.93□□□□□ -0.18
HFM1-207ENST00000481900 POTEHQ6S545 545 aa12.84□□□□□ -0.35
HFM1-207ENST00000481900 PIAS4Q8N2W9 510 aaPredicted RBP12.84□□□□□ -0.35
HFM1-207ENST00000481900 CACNB1Q02641 598 aaPredicted RBP12.83□□□□□ -0.36
HFM1-207ENST00000481900 PPP6R1Q9UPN7 881 aa11.96□□□□□ -0.5
HFM1-207ENST00000481900 ADRA2BP18089 450 aa11.86□□□□□ -0.51
HFM1-207ENST00000481900 DMRT2Q9Y5R5 561 aa11.68□□□□□ -0.54
HFM1-207ENST00000481900 RNF39Q9H2S5 420 aa11.65□□□□□ -0.54
HFM1-207ENST00000481900 PLSCR2Q9NRY7 297 aa11.63□□□□□ -0.55
HFM1-207ENST00000481900 C1QBPQ07021 282 aaKnown RBP11.48□□□□□ -0.57
HFM1-207ENST00000481900 MAPK8IP2Q13387 824 aaPredicted RBP11.33□□□□□ -0.6
HFM1-207ENST00000481900 PLPPR3Q6T4P5 718 aa11.32□□□□□ -0.6
HFM1-207ENST00000481900 DCAF8L1A6NGE4 600 aa11.23□□□□□ -0.61
HFM1-207ENST00000481900 SCAF1Q9H7N4 1312 aaKnown RBP11.08□□□□□ -0.64
HFM1-207ENST00000481900 SP7Q8TDD2 431 aaPredicted RBP10.9□□□□□ -0.66
HFM1-207ENST00000481900 DNAJC5BQ9UF47 199 aa10.72□□□□□ -0.69
HFM1-207ENST00000481900 HOXD11P31277 338 aaPredicted RBP10.67□□□□□ -0.7
HFM1-207ENST00000481900 DSG3P32926 999 aa10.4□□□□□ -0.75
HFM1-207ENST00000481900 CHRDL2Q6WN34 429 aa10.35□□□□□ -0.75
HFM1-207ENST00000481900 RNF216Q9NWF9 866 aaPredicted RBP10.19□□□□□ -0.78
HFM1-207ENST00000481900 LHX8Q68G74 356 aa10.17□□□□□ -0.78
HFM1-207ENST00000481900 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.16□□□□□ -0.78
HFM1-207ENST00000481900 CAPN15O75808 1086 aa10.12□□□□□ -0.79
HFM1-207ENST00000481900 PCDH10Q9P2E7 1040 aa10.09□□□□□ -0.79
HFM1-207ENST00000481900 RBM42Q9BTD8 480 aaKnown RBP10.09□□□□□ -0.79
HFM1-207ENST00000481900 HAX1O00165 279 aa10.03□□□□□ -0.8
HFM1-207ENST00000481900 SPINK5Q9NQ38 1064 aaPredicted RBP9.97□□□□□ -0.81
HFM1-207ENST00000481900 CNKSR2Q8WXI2 1034 aa9.91□□□□□ -0.82
HFM1-207ENST00000481900 PIP4P2Q8N4L2 257 aa9.77□□□□□ -0.85
HFM1-207ENST00000481900 U3KPZ7 1027 aaPredicted RBP9.7□□□□□ -0.86
HFM1-207ENST00000481900 PPP4R3CPQ6ZMV5 832 aa9.69□□□□□ -0.86
HFM1-207ENST00000481900 ABCB7O75027 752 aa9.68□□□□□ -0.86
HFM1-207ENST00000481900 POTEMA6NI47 508 aa9.66□□□□□ -0.86
HFM1-207ENST00000481900 EVX2Q03828 476 aa9.66□□□□□ -0.86
HFM1-207ENST00000481900 ZNF219Q9P2Y4 722 aaPredicted RBP9.58□□□□□ -0.88
HFM1-207ENST00000481900 KCNA4P22459 653 aa9.56□□□□□ -0.88
HFM1-207ENST00000481900 TRHP20396 242 aaPredicted RBP9.56□□□□□ -0.88
HFM1-207ENST00000481900 APLP2Q06481 763 aa9.53□□□□□ -0.88
HFM1-207ENST00000481900 POTEGQ6S5H5 508 aa9.53□□□□□ -0.88
HFM1-207ENST00000481900 FXR2P51116 673 aaKnown RBP eCLIP9.51□□□□□ -0.89
HFM1-207ENST00000481900 AKT1S1Q96B36 256 aa9.5□□□□□ -0.89
HFM1-207ENST00000481900 GABBR2O75899 941 aa9.48□□□□□ -0.89
HFM1-207ENST00000481900 EHMT2Q96KQ7 1210 aa9.38□□□□□ -0.91
HFM1-207ENST00000481900 REM2Q8IYK8 340 aaPredicted RBP9.34□□□□□ -0.91
HFM1-207ENST00000481900 C19orf67A6NJJ6 358 aa9.27□□□□□ -0.93
HFM1-207ENST00000481900 PITPNM1O00562 1244 aa9.23□□□□□ -0.93
HFM1-207ENST00000481900 POTEIP0CG38 1075 aa9.19□□□□□ -0.94
HFM1-207ENST00000481900 OTUD5Q96G74 571 aa9.16□□□□□ -0.94
HFM1-207ENST00000481900 SLC4A1APQ9BWU0 796 aaKnown RBP9.13□□□□□ -0.95
HFM1-207ENST00000481900 CSRNP3Q8WYN3 585 aa9.1□□□□□ -0.95
HFM1-207ENST00000481900 NCBP3Q53F19 620 aaKnown RBP9.09□□□□□ -0.95
HFM1-207ENST00000481900 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.08□□□□□ -0.96
HFM1-207ENST00000481900 HNRNPUL2Q1KMD3 747 aaKnown RBP9.08□□□□□ -0.96
HFM1-207ENST00000481900 NPM3O75607 178 aaKnown RBP9.04□□□□□ -0.96
HFM1-207ENST00000481900 CLCN6P51797 869 aa9.01□□□□□ -0.97
HFM1-207ENST00000481900 PRKAR2AP13861 404 aaKnown RBP9□□□□□ -0.97
HFM1-207ENST00000481900 POLA2Q14181 598 aa8.96□□□□□ -0.98
HFM1-207ENST00000481900 DCBLD2Q96PD2 775 aa8.95□□□□□ -0.98
HFM1-207ENST00000481900 SAMD1Q6SPF0 538 aaPredicted RBP8.92□□□□□ -0.98
HFM1-207ENST00000481900 ZBTB22O15209 634 aa8.84□□□□□ -0.99
HFM1-207ENST00000481900 LCE2DQ5TA82 110 aaPredicted RBP8.83□□□□□ -1
HFM1-207ENST00000481900 CDAN1Q8IWY9 1227 aa8.83□□□□□ -1
HFM1-207ENST00000481900 FAM163AQ96GL9 167 aaPredicted RBP8.83□□□□□ -1
HFM1-207ENST00000481900 ZBTB12Q9Y330 459 aaPredicted RBP8.83□□□□□ -1
HFM1-207ENST00000481900 POTEB2H3BUK9 544 aa8.81□□□□□ -1
HFM1-207ENST00000481900 MMRN1Q13201 1228 aa8.79□□□□□ -1
HFM1-207ENST00000481900 MAMSTRQ6ZN01 415 aa8.7□□□□□ -1.02
HFM1-207ENST00000481900 OSCARQ8IYS5 282 aa8.69□□□□□ -1.02
HFM1-207ENST00000481900 SLC4A2P04920 1241 aa8.65□□□□□ -1.02
HFM1-207ENST00000481900 SPNS2Q8IVW8 549 aa8.64□□□□□ -1.03
HFM1-207ENST00000481900 FOXD4L1Q9NU39 408 aa8.64□□□□□ -1.03
HFM1-207ENST00000481900 CD44P16070 742 aaKnown RBP8.63□□□□□ -1.03
HFM1-207ENST00000481900 SPDYE1Q8NFV5 336 aaPredicted RBP8.59□□□□□ -1.03
HFM1-207ENST00000481900 CLEC11AQ9Y240 323 aa8.56□□□□□ -1.04
HFM1-207ENST00000481900 CHADLQ6NUI6 762 aa8.5□□□□□ -1.05
HFM1-207ENST00000481900 SCUBE2Q9NQ36 999 aa8.49□□□□□ -1.05
HFM1-207ENST00000481900 ZNF579Q8NAF0 562 aaKnown RBP8.47□□□□□ -1.05
HFM1-207ENST00000481900 POTEJP0CG39 1038 aa8.44□□□□□ -1.06
HFM1-207ENST00000481900 SPDYE2BA6NHP3 402 aa8.36□□□□□ -1.07
HFM1-207ENST00000481900 GALR2O43603 387 aaPredicted RBP8.36□□□□□ -1.07
HFM1-207ENST00000481900 SPDYE6P0CI01 402 aa8.36□□□□□ -1.07
HFM1-207ENST00000481900 C7P10643 843 aa8.36□□□□□ -1.07
HFM1-207ENST00000481900 SPDYE2Q495Y8 402 aa8.36□□□□□ -1.07
HFM1-207ENST00000481900 METRNQ9UJH8 293 aa8.36□□□□□ -1.07
HFM1-207ENST00000481900 SLC39A7Q92504 469 aa8.34□□□□□ -1.07
HFM1-207ENST00000481900 PELP1Q8IZL8 1130 aaKnown RBP8.33□□□□□ -1.08
HFM1-207ENST00000481900 FARP1Q9Y4F1 1045 aaPredicted RBP8.31□□□□□ -1.08
HFM1-207ENST00000481900 MYCNP04198 464 aaPredicted RBP8.3□□□□□ -1.08
HFM1-207ENST00000481900 ZRANB1Q9UGI0 708 aa8.29□□□□□ -1.08
HFM1-207ENST00000481900 PRR29P0C7W0 189 aa8.27□□□□□ -1.09
HFM1-207ENST00000481900 ATXN8OSP0DMR3 200 aa8.27□□□□□ -1.09
HFM1-207ENST00000481900 ST18O60284 1047 aa8.21□□□□□ -1.1
HFM1-207ENST00000481900 RTN4Q9NQC3 1192 aaKnown RBP8.2□□□□□ -1.1
HFM1-207ENST00000481900 FKBP8Q14318 412 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 1104.9 ms