RNA–Protein interactions for RNA: ENST00000370425.7

HFM1-201, Transcript of HFM1, ATP dependent DNA helicase homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HFM1, Length 4,931 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1-201ENST00000370425 UNC13AQ9UPW8 1703 aa6.48□□□□□ -1.37
HFM1-201ENST00000370425 CCDC180Q9P1Z9 1646 aa6.28□□□□□ -1.4
HFM1-201ENST00000370425 NISCHQ9Y2I1 1504 aa6.05□□□□□ -1.44
HFM1-201ENST00000370425 BICRAQ9NZM4 1560 aa5.99□□□□□ -1.45
HFM1-201ENST00000370425 MYO15BQ96JP2 1530 aa5.86□□□□□ -1.47
HFM1-201ENST00000370425 DCAF1Q9Y4B6 1507 aa5.62□□□□□ -1.51
HFM1-201ENST00000370425 SHROOM4Q9ULL8 1493 aa5.61□□□□□ -1.51
HFM1-201ENST00000370425 PRDM2Q13029 1718 aa5.58□□□□□ -1.52
HFM1-201ENST00000370425 SCRIBQ14160 1630 aa5.55□□□□□ -1.52
HFM1-201ENST00000370425 PEG3Q9GZU2 1588 aa5.55□□□□□ -1.52
HFM1-201ENST00000370425 THOC2Q8NI27 1593 aaKnown RBP5.49□□□□□ -1.53
HFM1-201ENST00000370425 WDR97A6NE52 1622 aa5.38□□□□□ -1.55
HFM1-201ENST00000370425 EIF4G1Q04637 1599 aaKnown RBP5.35□□□□□ -1.55
HFM1-201ENST00000370425 NACADO15069 1562 aa5.34□□□□□ -1.55
HFM1-201ENST00000370425 POTEDQ86YR6 584 aa5.34□□□□□ -1.56
HFM1-201ENST00000370425 ZCCHC6Q5VYS8 1495 aaKnown RBP5.23□□□□□ -1.57
HFM1-201ENST00000370425 CC2D2AQ9P2K1 1620 aa5.22□□□□□ -1.57
HFM1-201ENST00000370425 KIF21AQ7Z4S6 1674 aa5.2□□□□□ -1.58
HFM1-201ENST00000370425 RB1CC1Q8TDY2 1594 aa5.17□□□□□ -1.58
HFM1-201ENST00000370425 DNAJC5BQ9UF47 199 aa5.16□□□□□ -1.58
HFM1-201ENST00000370425 PPRC1Q5VV67 1664 aaKnown RBP5.13□□□□□ -1.59
HFM1-201ENST00000370425 KIF13AQ9H1H9 1805 aa5.12□□□□□ -1.59
HFM1-201ENST00000370425 HMGXB3Q12766 1538 aa5.11□□□□□ -1.59
HFM1-201ENST00000370425 SHROOM2Q13796 1616 aa5.08□□□□□ -1.6
HFM1-201ENST00000370425 TARBP1Q13395 1621 aaKnown RBP5.04□□□□□ -1.6
HFM1-201ENST00000370425 WDR62O43379 1518 aa5.04□□□□□ -1.6
HFM1-201ENST00000370425 SMARCA2P51531 1590 aa5.03□□□□□ -1.6
HFM1-201ENST00000370425 SMARCA4P51532 1647 aa5.01□□□□□ -1.61
HFM1-201ENST00000370425 SIGLEC1Q9BZZ2 1709 aa4.98□□□□□ -1.61
HFM1-201ENST00000370425 CLASP1Q7Z460 1538 aa4.96□□□□□ -1.62
HFM1-201ENST00000370425 CUX2O14529 1486 aa4.89□□□□□ -1.63
HFM1-201ENST00000370425 ABCC9O60706 1549 aa4.88□□□□□ -1.63
HFM1-201ENST00000370425 CHD1O14646 1710 aa4.86□□□□□ -1.63
HFM1-201ENST00000370425 LAMC3Q9Y6N6 1575 aa4.86□□□□□ -1.63
HFM1-201ENST00000370425 NCAPD3P42695 1498 aa4.85□□□□□ -1.63
HFM1-201ENST00000370425 TOP2BQ02880 1626 aa4.85□□□□□ -1.63
HFM1-201ENST00000370425 ABCA5Q8WWZ7 1642 aa4.85□□□□□ -1.63
HFM1-201ENST00000370425 RIMBP3CA6NJZ7 1639 aa4.81□□□□□ -1.64
HFM1-201ENST00000370425 RIMBP3BA6NNM3 1639 aa4.81□□□□□ -1.64
HFM1-201ENST00000370425 RIMBP3Q9UFD9 1639 aa4.81□□□□□ -1.64
HFM1-201ENST00000370425 PBRM1Q86U86 1689 aa4.81□□□□□ -1.64
HFM1-201ENST00000370425 LRRIQ1Q96JM4 1722 aa4.79□□□□□ -1.64
HFM1-201ENST00000370425 BIVM-ERCC5R4GMW8 1640 aa4.77□□□□□ -1.65
HFM1-201ENST00000370425 BAZ1AQ9NRL2 1556 aaPredicted RBP4.76□□□□□ -1.65
HFM1-201ENST00000370425 EIF4G3O43432 1585 aaKnown RBP4.69□□□□□ -1.66
HFM1-201ENST00000370425 NESP48681 1621 aa4.69□□□□□ -1.66
HFM1-201ENST00000370425 MAP3K4Q9Y6R4 1608 aa4.68□□□□□ -1.66
HFM1-201ENST00000370425 WIZO95785 1651 aa4.67□□□□□ -1.66
HFM1-201ENST00000370425 ALKQ9UM73 1620 aa4.67□□□□□ -1.66
HFM1-201ENST00000370425 ATAD2BQ9ULI0 1458 aa4.66□□□□□ -1.66
HFM1-201ENST00000370425 BCORL1Q5H9F3 1711 aa4.64□□□□□ -1.67
HFM1-201ENST00000370425 FER1L4A9Z1Z3 1794 aa4.64□□□□□ -1.67
HFM1-201ENST00000370425 URB2Q14146 1524 aaKnown RBP4.63□□□□□ -1.67
HFM1-201ENST00000370425 FRMPD1Q5SYB0 1578 aa4.63□□□□□ -1.67
HFM1-201ENST00000370425 XIRP1Q702N8 1843 aaKnown RBP4.61□□□□□ -1.67
HFM1-201ENST00000370425 KDM6BO15054 1643 aa4.6□□□□□ -1.67
HFM1-201ENST00000370425 MROH2BQ7Z745 1585 aa4.6□□□□□ -1.67
HFM1-201ENST00000370425 RUSC2Q8N2Y8 1516 aa4.59□□□□□ -1.67
HFM1-201ENST00000370425 KDM5BQ9UGL1 1544 aa4.59□□□□□ -1.67
HFM1-201ENST00000370425 CFTRP13569 1480 aa4.56□□□□□ -1.68
HFM1-201ENST00000370425 STRCQ7RTU9 1775 aa4.56□□□□□ -1.68
HFM1-201ENST00000370425 ADCY10Q96PN6 1610 aa4.55□□□□□ -1.68
HFM1-201ENST00000370425 ADAMTSL3P82987 1691 aa4.55□□□□□ -1.68
HFM1-201ENST00000370425 CECR2Q9BXF3 1484 aa4.53□□□□□ -1.68
HFM1-201ENST00000370425 ERCC6L2Q5T890 1561 aa4.53□□□□□ -1.68
HFM1-201ENST00000370425 TOP2AP11388 1531 aaKnown RBP4.53□□□□□ -1.68
HFM1-201ENST00000370425 CEP170Q5SW79 1584 aa4.53□□□□□ -1.68
HFM1-201ENST00000370425 DIP2BQ9P265 1576 aa4.53□□□□□ -1.68
HFM1-201ENST00000370425 COL24A1Q17RW2 1714 aa4.53□□□□□ -1.68
HFM1-201ENST00000370425 RICTORQ6R327 1708 aa4.52□□□□□ -1.69
HFM1-201ENST00000370425 KIAA0556O60303 1618 aa4.52□□□□□ -1.69
HFM1-201ENST00000370425 RAPGEF6Q8TEU7 1601 aa4.51□□□□□ -1.69
HFM1-201ENST00000370425 GLI2P10070 1586 aa4.51□□□□□ -1.69
HFM1-201ENST00000370425 ADAMTS12P58397 1594 aa4.5□□□□□ -1.69
HFM1-201ENST00000370425 DNAJC5Q9H3Z4 198 aa4.5□□□□□ -1.69
HFM1-201ENST00000370425 ARAP1Q96P48 1450 aa4.49□□□□□ -1.69
HFM1-201ENST00000370425 MAPKBP1O60336 1514 aa4.48□□□□□ -1.69
HFM1-201ENST00000370425 DNMBPQ6XZF7 1577 aa4.46□□□□□ -1.69
HFM1-201ENST00000370425 QRICH2Q9H0J4 1663 aa4.45□□□□□ -1.7
HFM1-201ENST00000370425 ZNF142P52746 1687 aaPredicted RBP4.45□□□□□ -1.7
HFM1-201ENST00000370425 STRCP1A6NGW2 1772 aa4.44□□□□□ -1.7
HFM1-201ENST00000370425 ARHGEF11O15085 1522 aa4.43□□□□□ -1.7
HFM1-201ENST00000370425 LAMC1P11047 1609 aa4.43□□□□□ -1.7
HFM1-201ENST00000370425 EP400Q96L91 3159 aa4.4□□□□□ -1.7
HFM1-201ENST00000370425 CUX1P39880 1505 aa4.4□□□□□ -1.71
HFM1-201ENST00000370425 COL17A1Q9UMD9 1497 aaPredicted RBP4.4□□□□□ -1.71
HFM1-201ENST00000370425 SAMD9Q5K651 1589 aa4.38□□□□□ -1.71
HFM1-201ENST00000370425 CEP170BQ9Y4F5 1589 aaPredicted RBP4.38□□□□□ -1.71
HFM1-201ENST00000370425 KIF14Q15058 1648 aa4.38□□□□□ -1.71
HFM1-201ENST00000370425 SETD1AO15047 1707 aaKnown RBP4.37□□□□□ -1.71
HFM1-201ENST00000370425 CTTNBP2Q8WZ74 1663 aa4.37□□□□□ -1.71
HFM1-201ENST00000370425 CUL7Q14999 1698 aa4.37□□□□□ -1.71
HFM1-201ENST00000370425 ZC3H13Q5T200 1668 aaKnown RBP4.36□□□□□ -1.71
HFM1-201ENST00000370425 REREQ9P2R6 1566 aa4.36□□□□□ -1.71
HFM1-201ENST00000370425 CRYBG1Q9Y4K1 1723 aa4.36□□□□□ -1.71
HFM1-201ENST00000370425 CHIC1Q5VXU3 224 aa4.36□□□□□ -1.71
HFM1-201ENST00000370425 MRC2Q9UBG0 1479 aa4.35□□□□□ -1.71
HFM1-201ENST00000370425 ABCA9Q8IUA7 1624 aa4.35□□□□□ -1.71
HFM1-201ENST00000370425 NUP160Q12769 1436 aa4.35□□□□□ -1.71
HFM1-201ENST00000370425 PCF11O94913 1555 aaKnown RBP4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms