RNA–Protein interactions for RNA: ENST00000448819.5

HFM1-204, Transcript of HFM1, ATP dependent DNA helicase homolog, humanhuman

TSL 5

Gene HFM1, Length 540 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1-204ENST00000448819 AEBP2Q6ZN18 517 aaPredicted RBP28.64■■■□□ 2.18
HFM1-204ENST00000448819 CHIC1Q5VXU3 224 aa27.82■■■□□ 2.04
HFM1-204ENST00000448819 PHF23Q9BUL5 403 aaPredicted RBP24.46■■□□□ 1.51
HFM1-204ENST00000448819 SENP3Q9H4L4 574 aaPredicted RBP24.33■■□□□ 1.49
HFM1-204ENST00000448819 NISCHQ9Y2I1 1504 aa23.62■■□□□ 1.37
HFM1-204ENST00000448819 FOXD1Q16676 465 aa22.6■■□□□ 1.21
HFM1-204ENST00000448819 PLPPR3Q6T4P5 718 aa22.53■■□□□ 1.2
HFM1-204ENST00000448819 PPP6R1Q9UPN7 881 aa21.64■■□□□ 1.05
HFM1-204ENST00000448819 ADRA2BP18089 450 aa21.62■■□□□ 1.05
HFM1-204ENST00000448819 PIAS4Q8N2W9 510 aaPredicted RBP21.29■■□□□ 1
HFM1-204ENST00000448819 ABCC9O60706 1549 aa21.19■□□□□ 0.98
HFM1-204ENST00000448819 CCDC180Q9P1Z9 1646 aa21.19■□□□□ 0.98
HFM1-204ENST00000448819 MSH5O43196 834 aa20.9■□□□□ 0.94
HFM1-204ENST00000448819 RB1CC1Q8TDY2 1594 aa20.17■□□□□ 0.82
HFM1-204ENST00000448819 NACADO15069 1562 aa20.04■□□□□ 0.8
HFM1-204ENST00000448819 DNAJC5BQ9UF47 199 aa20■□□□□ 0.79
HFM1-204ENST00000448819 DCAF8L2P0C7V8 631 aa19.88■□□□□ 0.77
HFM1-204ENST00000448819 PPP4R3CPQ6ZMV5 832 aa19.84■□□□□ 0.77
HFM1-204ENST00000448819 UNC13AQ9UPW8 1703 aa19.82■□□□□ 0.76
HFM1-204ENST00000448819 SCAF1Q9H7N4 1312 aaKnown RBP19.76■□□□□ 0.75
HFM1-204ENST00000448819 MYO15BQ96JP2 1530 aa19.76■□□□□ 0.75
HFM1-204ENST00000448819 PABPN1Q86U42 306 aaKnown RBP eCLIP19.74■□□□□ 0.75
HFM1-204ENST00000448819 MAPK8IP2Q13387 824 aaPredicted RBP19.66■□□□□ 0.74
HFM1-204ENST00000448819 BICRAQ9NZM4 1560 aa19.65■□□□□ 0.74
HFM1-204ENST00000448819 ZCCHC6Q5VYS8 1495 aaKnown RBP19.55■□□□□ 0.72
HFM1-204ENST00000448819 DCAF1Q9Y4B6 1507 aa19.51■□□□□ 0.71
HFM1-204ENST00000448819 DMRT2Q9Y5R5 561 aa19.39■□□□□ 0.69
HFM1-204ENST00000448819 POTEDQ86YR6 584 aa19.31■□□□□ 0.68
HFM1-204ENST00000448819 CNKSR2Q8WXI2 1034 aa19.31■□□□□ 0.68
HFM1-204ENST00000448819 SCRIBQ14160 1630 aa19.29■□□□□ 0.68
HFM1-204ENST00000448819 SHROOM4Q9ULL8 1493 aa19.28■□□□□ 0.68
HFM1-204ENST00000448819 NCBP3Q53F19 620 aaKnown RBP19.28■□□□□ 0.68
HFM1-204ENST00000448819 KCNA4P22459 653 aa19.22■□□□□ 0.67
HFM1-204ENST00000448819 CC2D2AQ9P2K1 1620 aa19.18■□□□□ 0.66
HFM1-204ENST00000448819 EIF4G1Q04637 1599 aaKnown RBP19.11■□□□□ 0.65
HFM1-204ENST00000448819 CECR2Q9BXF3 1484 aa19.09■□□□□ 0.65
HFM1-204ENST00000448819 NPM3O75607 178 aaKnown RBP18.99■□□□□ 0.63
HFM1-204ENST00000448819 RNF216Q9NWF9 866 aaPredicted RBP18.96■□□□□ 0.63
HFM1-204ENST00000448819 HOXD11P31277 338 aaPredicted RBP18.92■□□□□ 0.62
HFM1-204ENST00000448819 DCAF8L1A6NGE4 600 aa18.62■□□□□ 0.57
HFM1-204ENST00000448819 NCAPD3P42695 1498 aa18.52■□□□□ 0.55
HFM1-204ENST00000448819 ATAD2BQ9ULI0 1458 aa18.45■□□□□ 0.54
HFM1-204ENST00000448819 SMARCA4P51532 1647 aa18.42■□□□□ 0.54
HFM1-204ENST00000448819 SMARCA2P51531 1590 aa18.36■□□□□ 0.53
HFM1-204ENST00000448819 HMGXB3Q12766 1538 aa18.34■□□□□ 0.53
HFM1-204ENST00000448819 DNAJC5Q9H3Z4 198 aa18.34■□□□□ 0.53
HFM1-204ENST00000448819 BAZ1AQ9NRL2 1556 aaPredicted RBP18.3■□□□□ 0.52
HFM1-204ENST00000448819 SLC4A1APQ9BWU0 796 aaKnown RBP18.28■□□□□ 0.52
HFM1-204ENST00000448819 CUX2O14529 1486 aa18.27■□□□□ 0.52
HFM1-204ENST00000448819 PEG3Q9GZU2 1588 aa18.26■□□□□ 0.51
HFM1-204ENST00000448819 ERCC6Q03468 1493 aa18.25■□□□□ 0.51
HFM1-204ENST00000448819 NESP48681 1621 aa18.23■□□□□ 0.51
HFM1-204ENST00000448819 BAZ1BQ9UIG0 1483 aaKnown RBP18.22■□□□□ 0.51
HFM1-204ENST00000448819 MROH2BQ7Z745 1585 aa18.21■□□□□ 0.51
HFM1-204ENST00000448819 LAMC3Q9Y6N6 1575 aa18.08■□□□□ 0.49
HFM1-204ENST00000448819 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.07■□□□□ 0.48
HFM1-204ENST00000448819 THOC2Q8NI27 1593 aaKnown RBP18.05■□□□□ 0.48
HFM1-204ENST00000448819 KIF21AQ7Z4S6 1674 aa18.02■□□□□ 0.47
HFM1-204ENST00000448819 WIZO95785 1651 aa18.01■□□□□ 0.47
HFM1-204ENST00000448819 SLC4A2P04920 1241 aa17.97■□□□□ 0.47
HFM1-204ENST00000448819 PDS5BQ9NTI5 1447 aa17.95■□□□□ 0.46
HFM1-204ENST00000448819 CADPSQ9ULU8 1353 aa17.93■□□□□ 0.46
HFM1-204ENST00000448819 RNF39Q9H2S5 420 aa17.89■□□□□ 0.45
HFM1-204ENST00000448819 RSF1Q96T23 1441 aaPredicted RBP17.81■□□□□ 0.44
HFM1-204ENST00000448819 MRC2Q9UBG0 1479 aa17.8■□□□□ 0.44
HFM1-204ENST00000448819 WDR62O43379 1518 aa17.77■□□□□ 0.44
HFM1-204ENST00000448819 U3KPZ7 1027 aaPredicted RBP17.74■□□□□ 0.43
HFM1-204ENST00000448819 CFTRP13569 1480 aa17.73■□□□□ 0.43
HFM1-204ENST00000448819 TOP2AP11388 1531 aaKnown RBP17.72■□□□□ 0.43
HFM1-204ENST00000448819 FOXD4L1Q9NU39 408 aa17.72■□□□□ 0.43
HFM1-204ENST00000448819 FANCD2Q9BXW9 1451 aa17.71■□□□□ 0.43
HFM1-204ENST00000448819 CEP164Q9UPV0 1460 aa17.71■□□□□ 0.43
HFM1-204ENST00000448819 ZBTB22O15209 634 aa17.68■□□□□ 0.42
HFM1-204ENST00000448819 C1QBPQ07021 282 aaKnown RBP17.66■□□□□ 0.42
HFM1-204ENST00000448819 EHMT2Q96KQ7 1210 aa17.61■□□□□ 0.41
HFM1-204ENST00000448819 URB2Q14146 1524 aaKnown RBP17.6■□□□□ 0.41
HFM1-204ENST00000448819 PRDM2Q13029 1718 aa17.6■□□□□ 0.41
HFM1-204ENST00000448819 CACNB1Q02641 598 aaPredicted RBP17.56■□□□□ 0.4
HFM1-204ENST00000448819 CCDC88BA6NC98 1476 aa17.56■□□□□ 0.4
HFM1-204ENST00000448819 MYCNP04198 464 aaPredicted RBP17.55■□□□□ 0.4
HFM1-204ENST00000448819 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.46■□□□□ 0.39
HFM1-204ENST00000448819 HNRNPUL2Q1KMD3 747 aaKnown RBP17.46■□□□□ 0.39
HFM1-204ENST00000448819 TRIM41Q8WV44 630 aa17.45■□□□□ 0.38
HFM1-204ENST00000448819 OSCARQ8IYS5 282 aa17.44■□□□□ 0.38
HFM1-204ENST00000448819 CSRNP3Q8WYN3 585 aa17.44■□□□□ 0.38
HFM1-204ENST00000448819 SAMD1Q6SPF0 538 aaPredicted RBP17.4■□□□□ 0.38
HFM1-204ENST00000448819 TOPBP1Q92547 1522 aa17.4■□□□□ 0.38
HFM1-204ENST00000448819 ZNF608Q9ULD9 1512 aaPredicted RBP17.39■□□□□ 0.37
HFM1-204ENST00000448819 IFT140Q96RY7 1462 aa17.37■□□□□ 0.37
HFM1-204ENST00000448819 ABCC8Q09428 1581 aa17.33■□□□□ 0.37
HFM1-204ENST00000448819 APLP2Q06481 763 aa17.32■□□□□ 0.36
HFM1-204ENST00000448819 SPINK5Q9NQ38 1064 aaPredicted RBP17.31■□□□□ 0.36
HFM1-204ENST00000448819 DNMBPQ6XZF7 1577 aa17.31■□□□□ 0.36
HFM1-204ENST00000448819 TARBP1Q13395 1621 aaKnown RBP17.27■□□□□ 0.36
HFM1-204ENST00000448819 EIF4G3O43432 1585 aaKnown RBP17.27■□□□□ 0.35
HFM1-204ENST00000448819 CAPN15O75808 1086 aa17.26■□□□□ 0.35
HFM1-204ENST00000448819 RIMBP3CA6NJZ7 1639 aa17.25■□□□□ 0.35
HFM1-204ENST00000448819 RIMBP3BA6NNM3 1639 aa17.25■□□□□ 0.35
HFM1-204ENST00000448819 RIMBP3Q9UFD9 1639 aa17.25■□□□□ 0.35
HFM1-204ENST00000448819 AQRO60306 1485 aaKnown RBP eCLIP17.22■□□□□ 0.351e-7■■■□□ 17.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms