RNA–Protein interactions for RNA: ENST00000460017.1

STK40-205, Transcript of serine/threonine kinase 40, humanhuman

TSL 5

Gene STK40, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STK40-205ENST00000460017 NISCHQ9Y2I1 1504 aa49.64■■■■■ 5.54
STK40-205ENST00000460017 ABCC9O60706 1549 aa45.01■■■■■ 4.8
STK40-205ENST00000460017 CCDC180Q9P1Z9 1646 aa44.77■■■■■ 4.76
STK40-205ENST00000460017 RB1CC1Q8TDY2 1594 aa42.72■■■■■ 4.43
STK40-205ENST00000460017 DNAJC5BQ9UF47 199 aa42.46■■■■■ 4.39
STK40-205ENST00000460017 NACADO15069 1562 aa42.33■■■■■ 4.37
STK40-205ENST00000460017 DCAF8L2P0C7V8 631 aa41.9■■■■■ 4.3
STK40-205ENST00000460017 UNC13AQ9UPW8 1703 aa41.87■■■■■ 4.29
STK40-205ENST00000460017 PABPN1Q86U42 306 aaKnown RBP eCLIP41.78■■■■■ 4.28
STK40-205ENST00000460017 MYO15BQ96JP2 1530 aa41.64■■■■■ 4.26
STK40-205ENST00000460017 BICRAQ9NZM4 1560 aa41.53■■■■■ 4.24
STK40-205ENST00000460017 ZCCHC6Q5VYS8 1495 aaKnown RBP41.1■■■■■ 4.17
STK40-205ENST00000460017 DCAF1Q9Y4B6 1507 aa40.99■■■■■ 4.15
STK40-205ENST00000460017 SHROOM4Q9ULL8 1493 aa40.9■■■■■ 4.14
STK40-205ENST00000460017 SCRIBQ14160 1630 aa40.75■■■■■ 4.11
STK40-205ENST00000460017 CC2D2AQ9P2K1 1620 aa40.68■■■■■ 4.1
STK40-205ENST00000460017 CECR2Q9BXF3 1484 aa40.57■■■■■ 4.08
STK40-205ENST00000460017 EIF4G1Q04637 1599 aaKnown RBP40.52■■■■■ 4.08
STK40-205ENST00000460017 DNAJC5Q9H3Z4 198 aa39.2■■■■□ 3.87
STK40-205ENST00000460017 NCAPD3P42695 1498 aa39.05■■■■□ 3.84
STK40-205ENST00000460017 CUX2O14529 1486 aa38.93■■■■□ 3.82
STK40-205ENST00000460017 ATAD2BQ9ULI0 1458 aa38.9■■■■□ 3.82
STK40-205ENST00000460017 ERCC6Q03468 1493 aa38.87■■■■□ 3.81
STK40-205ENST00000460017 SMARCA4P51532 1647 aa38.84■■■■□ 3.81
STK40-205ENST00000460017 HMGXB3Q12766 1538 aa38.79■■■■□ 3.8
STK40-205ENST00000460017 SMARCA2P51531 1590 aa38.79■■■■□ 3.8
STK40-205ENST00000460017 NESP48681 1621 aa38.59■■■■□ 3.77
STK40-205ENST00000460017 BAZ1AQ9NRL2 1556 aaPredicted RBP38.57■■■■□ 3.76
STK40-205ENST00000460017 BAZ1BQ9UIG0 1483 aaKnown RBP38.52■■■■□ 3.76
STK40-205ENST00000460017 PEG3Q9GZU2 1588 aa38.45■■■■□ 3.75
STK40-205ENST00000460017 THOC2Q8NI27 1593 aaKnown RBP38.33■■■■□ 3.73
STK40-205ENST00000460017 LAMC3Q9Y6N6 1575 aa38.27■■■■□ 3.72
STK40-205ENST00000460017 MROH2BQ7Z745 1585 aa38.26■■■■□ 3.72
STK40-205ENST00000460017 KIF21AQ7Z4S6 1674 aa38.16■■■■□ 3.7
STK40-205ENST00000460017 PDS5BQ9NTI5 1447 aa38■■■■□ 3.67
STK40-205ENST00000460017 CADPSQ9ULU8 1353 aa37.82■■■■□ 3.65
STK40-205ENST00000460017 WIZO95785 1651 aa37.82■■■■□ 3.64
STK40-205ENST00000460017 MRC2Q9UBG0 1479 aa37.74■■■■□ 3.63
STK40-205ENST00000460017 WDR62O43379 1518 aa37.69■■■■□ 3.62
STK40-205ENST00000460017 CEP164Q9UPV0 1460 aa37.52■■■■□ 3.6
STK40-205ENST00000460017 FANCD2Q9BXW9 1451 aa37.45■■■■□ 3.59
STK40-205ENST00000460017 CFTRP13569 1480 aa37.36■■■■□ 3.57
STK40-205ENST00000460017 TRIM41Q8WV44 630 aa37.35■■■■□ 3.57
STK40-205ENST00000460017 TOP2AP11388 1531 aaKnown RBP37.31■■■■□ 3.56
STK40-205ENST00000460017 RSF1Q96T23 1441 aaPredicted RBP37.3■■■■□ 3.56
STK40-205ENST00000460017 URB2Q14146 1524 aaKnown RBP37.18■■■■□ 3.54
STK40-205ENST00000460017 PRDM2Q13029 1718 aa37.1■■■■□ 3.53
STK40-205ENST00000460017 OSCARQ8IYS5 282 aa36.99■■■■□ 3.51
STK40-205ENST00000460017 CCDC88BA6NC98 1476 aa36.83■■■■□ 3.49
STK40-205ENST00000460017 IFT140Q96RY7 1462 aa36.77■■■■□ 3.48
STK40-205ENST00000460017 ZNF608Q9ULD9 1512 aaPredicted RBP36.77■■■■□ 3.48
STK40-205ENST00000460017 TOPBP1Q92547 1522 aa36.71■■■■□ 3.47
STK40-205ENST00000460017 RIMBP3CA6NJZ7 1639 aa36.7■■■■□ 3.47
STK40-205ENST00000460017 RIMBP3BA6NNM3 1639 aa36.7■■■■□ 3.47
STK40-205ENST00000460017 RIMBP3Q9UFD9 1639 aa36.7■■■■□ 3.47
STK40-205ENST00000460017 EIF4G3O43432 1585 aaKnown RBP36.61■■■■□ 3.45
STK40-205ENST00000460017 ABCC8Q09428 1581 aa36.57■■■■□ 3.44
STK40-205ENST00000460017 DNMBPQ6XZF7 1577 aa36.57■■■■□ 3.44
STK40-205ENST00000460017 ARHGEF11O15085 1522 aa36.53■■■■□ 3.44
STK40-205ENST00000460017 TARBP1Q13395 1621 aaKnown RBP36.45■■■■□ 3.42
STK40-205ENST00000460017 CHD1O14646 1710 aa36.42■■■■□ 3.42
STK40-205ENST00000460017 AQRO60306 1485 aaKnown RBP eCLIP36.35■■■■□ 3.41
STK40-205ENST00000460017 POLA1P09884 1462 aaPredicted RBP36.31■■■■□ 3.4
STK40-205ENST00000460017 RAD54L2Q9Y4B4 1467 aa36.17■■■■□ 3.38
STK40-205ENST00000460017 CYB5RLQ6IPT4 315 aa36.16■■■■□ 3.38
STK40-205ENST00000460017 ARAP1Q96P48 1450 aa36.15■■■■□ 3.38
STK40-205ENST00000460017 FBLN2P98095 1184 aa36.11■■■■□ 3.37
STK40-205ENST00000460017 SOGA1O94964 1423 aa36.08■■■■□ 3.37
STK40-205ENST00000460017 TDRD9Q8NDG6 1382 aaKnown RBP36.06■■■■□ 3.36
STK40-205ENST00000460017 FGD5Q6ZNL6 1462 aa36.05■■■■□ 3.36
STK40-205ENST00000460017 WDR97A6NE52 1622 aa36.05■■■■□ 3.36
STK40-205ENST00000460017 SNAPC4Q5SXM2 1469 aa36.02■■■■□ 3.36
STK40-205ENST00000460017 CUX1P39880 1505 aa35.98■■■■□ 3.35
STK40-205ENST00000460017 CLASP1Q7Z460 1538 aa35.96■■■■□ 3.35
STK40-205ENST00000460017 MAGI1Q96QZ7 1491 aaPredicted RBP35.9■■■■□ 3.34
STK40-205ENST00000460017 SYNJ1O43426 1573 aa35.88■■■■□ 3.33
STK40-205ENST00000460017 TRHP20396 242 aaPredicted RBP35.87■■■■□ 3.33
STK40-205ENST00000460017 GRIN2BQ13224 1484 aa35.85■■■■□ 3.33
STK40-205ENST00000460017 CHMP7Q8WUX9 453 aaPredicted RBP35.8■■■■□ 3.32
STK40-205ENST00000460017 PBRM1Q86U86 1689 aa35.79■■■■□ 3.32
STK40-205ENST00000460017 SYNJ2O15056 1496 aa35.78■■■■□ 3.32
STK40-205ENST00000460017 GAPVD1Q14C86 1478 aa35.67■■■■□ 3.3
STK40-205ENST00000460017 ABCA5Q8WWZ7 1642 aa35.65■■■■□ 3.3
STK40-205ENST00000460017 ABCA10Q8WWZ4 1543 aa35.61■■■■□ 3.29
STK40-205ENST00000460017 GRIN2AQ12879 1464 aa35.41■■■■□ 3.26
STK40-205ENST00000460017 ADAMTS12P58397 1594 aa35.4■■■■□ 3.26
STK40-205ENST00000460017 ERCC6L2Q5T890 1561 aa35.37■■■■□ 3.25
STK40-205ENST00000460017 BIVM-ERCC5R4GMW8 1640 aa35.35■■■■□ 3.25
STK40-205ENST00000460017 WRNQ14191 1432 aaPredicted RBP eCLIP35.35■■■■□ 3.25
STK40-205ENST00000460017 CEP170Q5SW79 1584 aa35.34■■■■□ 3.25
STK40-205ENST00000460017 SUPT5HO00267 1087 aaKnown RBP35.33■■■■□ 3.25
STK40-205ENST00000460017 TOP2BQ02880 1626 aa35.32■■■■□ 3.24
STK40-205ENST00000460017 NUP160Q12769 1436 aa35.3■■■■□ 3.24
STK40-205ENST00000460017 SHROOM2Q13796 1616 aa35.24■■■■□ 3.23
STK40-205ENST00000460017 FHAD1B1AJZ9 1412 aa35.2■■■■□ 3.23
STK40-205ENST00000460017 ERICH3Q5RHP9 1530 aa35.16■■■■□ 3.22
STK40-205ENST00000460017 AEBP2Q6ZN18 517 aaPredicted RBP35.05■■■■□ 3.2
STK40-205ENST00000460017 KIF13AQ9H1H9 1805 aa34.97■■■■□ 3.19
STK40-205ENST00000460017 PRG4Q92954 1404 aaPredicted RBP34.95■■■■□ 3.19
STK40-205ENST00000460017 RUSC2Q8N2Y8 1516 aa34.92■■■■□ 3.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms