RNA–Protein interactions for RNA: ENST00000617190.4

LRRC41-207, Transcript of leucine rich repeat containing 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC41, Length 4,128 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC41-207ENST00000617190 NISCHQ9Y2I1 1504 aa20.69■□□□□ 0.9
LRRC41-207ENST00000617190 DCAF8L2P0C7V8 631 aa19.96■□□□□ 0.79
LRRC41-207ENST00000617190 SUPT5HO00267 1087 aaKnown RBP19.84■□□□□ 0.77
LRRC41-207ENST00000617190 SHROOM4Q9ULL8 1493 aa19.76■□□□□ 0.75
LRRC41-207ENST00000617190 EHMT2Q96KQ7 1210 aa19.02■□□□□ 0.64
LRRC41-207ENST00000617190 PCGF6Q9BYE7 350 aa18.99■□□□□ 0.63
LRRC41-207ENST00000617190 FAM9AQ8IZU1 332 aaPredicted RBP18.62■□□□□ 0.57
LRRC41-207ENST00000617190 PPARGC1BQ86YN6 1023 aaKnown RBP18.61■□□□□ 0.57
LRRC41-207ENST00000617190 HRCP23327 699 aa18.47■□□□□ 0.55
LRRC41-207ENST00000617190 TTBK1Q5TCY1 1321 aaPredicted RBP18.39■□□□□ 0.53
LRRC41-207ENST00000617190 LOC105371045A0A1W2PR82 267 aa18.37■□□□□ 0.53
LRRC41-207ENST00000617190 CHIC1Q5VXU3 224 aa18.34■□□□□ 0.53
LRRC41-207ENST00000617190 TRIM41Q8WV44 630 aa18.16■□□□□ 0.5
LRRC41-207ENST00000617190 TRIM26Q12899 539 aaPredicted RBP18■□□□□ 0.47
LRRC41-207ENST00000617190 CCER1Q8TC90 406 aaPredicted RBP17.97■□□□□ 0.47
LRRC41-207ENST00000617190 ZEB1P37275 1124 aaPredicted RBP17.89■□□□□ 0.45
LRRC41-207ENST00000617190 RANGAP1P46060 587 aaPredicted RBP17.87■□□□□ 0.45
LRRC41-207ENST00000617190 YTHDC1Q96MU7 727 aaKnown RBP17.82■□□□□ 0.44
LRRC41-207ENST00000617190 PELP1Q8IZL8 1130 aaKnown RBP17.72■□□□□ 0.43
LRRC41-207ENST00000617190 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.68■□□□□ 0.42
LRRC41-207ENST00000617190 CENPBP07199 599 aaPredicted RBP17.67■□□□□ 0.42
LRRC41-207ENST00000617190 APLP2Q06481 763 aa17.66■□□□□ 0.42
LRRC41-207ENST00000617190 UBTFP17480 764 aaKnown RBP17.65■□□□□ 0.42
LRRC41-207ENST00000617190 MYO15BQ96JP2 1530 aa17.63■□□□□ 0.41
LRRC41-207ENST00000617190 HNRNPUL2Q1KMD3 747 aaKnown RBP17.41■□□□□ 0.38
LRRC41-207ENST00000617190 GTF3C3Q9Y5Q9 886 aa17.41■□□□□ 0.38
LRRC41-207ENST00000617190 SCAF1Q9H7N4 1312 aaKnown RBP17.4■□□□□ 0.38
LRRC41-207ENST00000617190 DIEXFQ68CQ4 756 aaKnown RBP17.37■□□□□ 0.37
LRRC41-207ENST00000617190 ZCCHC6Q5VYS8 1495 aaKnown RBP17.31■□□□□ 0.36
LRRC41-207ENST00000617190 ATP1B4Q9UN42 357 aaPredicted RBP17.24■□□□□ 0.35
LRRC41-207ENST00000617190 ITGAEP38570 1179 aa17.23■□□□□ 0.35
LRRC41-207ENST00000617190 NEUROD1Q13562 356 aa17.22■□□□□ 0.35
LRRC41-207ENST00000617190 ACIN1Q9UKV3 1341 aaKnown RBP17.2■□□□□ 0.34
LRRC41-207ENST00000617190 DCAF1Q9Y4B6 1507 aa17.19■□□□□ 0.34
LRRC41-207ENST00000617190 ABCC9O60706 1549 aa17.05■□□□□ 0.32
LRRC41-207ENST00000617190 MYT1Q01538 1121 aa16.98■□□□□ 0.31
LRRC41-207ENST00000617190 PABPN1Q86U42 306 aaKnown RBP eCLIP16.97■□□□□ 0.31
LRRC41-207ENST00000617190 ZNF316A6NFI3 1004 aaPredicted RBP16.94■□□□□ 0.3
LRRC41-207ENST00000617190 BCANQ96GW7 911 aa16.94■□□□□ 0.3
LRRC41-207ENST00000617190 SCRIBQ14160 1630 aa16.9■□□□□ 0.3
LRRC41-207ENST00000617190 NEFLP07196 543 aa16.87■□□□□ 0.29
LRRC41-207ENST00000617190 ERICH6Q7L0X2 663 aa16.82■□□□□ 0.28
LRRC41-207ENST00000617190 CSRNP3Q8WYN3 585 aa16.82■□□□□ 0.28
LRRC41-207ENST00000617190 CNGB1Q14028 1251 aaPredicted RBP16.81■□□□□ 0.28
LRRC41-207ENST00000617190 RSF1Q96T23 1441 aaPredicted RBP16.78■□□□□ 0.28
LRRC41-207ENST00000617190 MIER1Q8N108 512 aa16.76■□□□□ 0.27
LRRC41-207ENST00000617190 CCDC180Q9P1Z9 1646 aa16.68■□□□□ 0.26
LRRC41-207ENST00000617190 FAM50AQ14320 339 aaKnown RBP16.68■□□□□ 0.26
LRRC41-207ENST00000617190 POLR3GLQ9BT43 218 aa16.63■□□□□ 0.25
LRRC41-207ENST00000617190 P3H3Q8IVL6 736 aa16.55■□□□□ 0.24
LRRC41-207ENST00000617190 CECR2Q9BXF3 1484 aa16.51■□□□□ 0.23
LRRC41-207ENST00000617190 CEP162Q5TB80 1403 aa16.49■□□□□ 0.23
LRRC41-207ENST00000617190 RB1CC1Q8TDY2 1594 aa16.47■□□□□ 0.23
LRRC41-207ENST00000617190 HIRIP3Q9BW71 556 aaPredicted RBP16.47■□□□□ 0.23
LRRC41-207ENST00000617190 DDX10Q13206 875 aaKnown RBP16.45■□□□□ 0.22
LRRC41-207ENST00000617190 FKBP8Q14318 412 aa16.44■□□□□ 0.22
LRRC41-207ENST00000617190 TRIM52Q96A61 297 aa16.39■□□□□ 0.21
LRRC41-207ENST00000617190 ANP32CO43423 234 aa16.38■□□□□ 0.21
LRRC41-207ENST00000617190 SOGA1O94964 1423 aa16.36■□□□□ 0.21
LRRC41-207ENST00000617190 ARID3CA6NKF2 412 aa16.34■□□□□ 0.21
LRRC41-207ENST00000617190 CLIP1P30622 1438 aa16.34■□□□□ 0.21
LRRC41-207ENST00000617190 IRX6P78412 446 aaPredicted RBP16.3■□□□□ 0.2
LRRC41-207ENST00000617190 MROH2BQ7Z745 1585 aa16.26■□□□□ 0.19
LRRC41-207ENST00000617190 ZNF326Q5BKZ1 582 aaKnown RBP16.26■□□□□ 0.19
LRRC41-207ENST00000617190 TNIKQ9UKE5 1360 aa16.25■□□□□ 0.19
LRRC41-207ENST00000617190 ABCC8Q09428 1581 aa16.24■□□□□ 0.19
LRRC41-207ENST00000617190 SUPT16HQ9Y5B9 1047 aaKnown RBP16.24■□□□□ 0.19
LRRC41-207ENST00000617190 CCDC88BA6NC98 1476 aa16.24■□□□□ 0.19
LRRC41-207ENST00000617190 HNRNPUQ00839 825 aaKnown RBP eCLIP16.2■□□□□ 0.182e-9■■■■■ 29.3
LRRC41-207ENST00000617190 GOLGA3Q08378 1498 aa16.19■□□□□ 0.18
LRRC41-207ENST00000617190 CDK11AQ9UQ88 783 aaPredicted RBP16.19■□□□□ 0.18
LRRC41-207ENST00000617190 SENP3-EIF4A1A0A087X0R7 540 aa16.17■□□□□ 0.18
LRRC41-207ENST00000617190 WRNQ14191 1432 aaPredicted RBP eCLIP16.16■□□□□ 0.185e-7■□□□□ 10
LRRC41-207ENST00000617190 SIN3AQ96ST3 1273 aa16.15■□□□□ 0.18
LRRC41-207ENST00000617190 KCNH8Q96L42 1107 aa16.12■□□□□ 0.17
LRRC41-207ENST00000617190 ANP32EQ9BTT0 268 aa16.12■□□□□ 0.17
LRRC41-207ENST00000617190 FAM9BQ8IZU0 186 aa16.12■□□□□ 0.17
LRRC41-207ENST00000617190 CHIC2Q9UKJ5 165 aa16.12■□□□□ 0.17
LRRC41-207ENST00000617190 KANK4Q5T7N3 995 aaPredicted RBP16.09■□□□□ 0.17
LRRC41-207ENST00000617190 TONSLQ96HA7 1378 aa16.08■□□□□ 0.17
LRRC41-207ENST00000617190 WIZO95785 1651 aa16.08■□□□□ 0.16
LRRC41-207ENST00000617190 RUSC2Q8N2Y8 1516 aa16.08■□□□□ 0.16
LRRC41-207ENST00000617190 EEA1Q15075 1411 aa16.06■□□□□ 0.16
LRRC41-207ENST00000617190 NBR1Q14596 966 aa16.04■□□□□ 0.16
LRRC41-207ENST00000617190 TSHZ2Q9NRE2 1034 aa16.04■□□□□ 0.16
LRRC41-207ENST00000617190 CLSPNQ9HAW4 1339 aa16.04■□□□□ 0.16
LRRC41-207ENST00000617190 RTL5Q5HYW3 569 aaPredicted RBP16.02■□□□□ 0.16
LRRC41-207ENST00000617190 BCL11AQ9H165 835 aa16.02■□□□□ 0.15
LRRC41-207ENST00000617190 CEP164Q9UPV0 1460 aa16.01■□□□□ 0.15
LRRC41-207ENST00000617190 SALL2Q9Y467 1007 aaPredicted RBP16■□□□□ 0.15
LRRC41-207ENST00000617190 DAXXQ9UER7 740 aaPredicted RBP15.99■□□□□ 0.15
LRRC41-207ENST00000617190 BAZ1AQ9NRL2 1556 aaPredicted RBP15.98■□□□□ 0.15
LRRC41-207ENST00000617190 NPM2Q86SE8 214 aaKnown RBP15.98■□□□□ 0.15
LRRC41-207ENST00000617190 NACADO15069 1562 aa15.96■□□□□ 0.14
LRRC41-207ENST00000617190 RRP7BPQ9NSQ0 103 aa15.95■□□□□ 0.14
LRRC41-207ENST00000617190 ZNF777Q9ULD5 760 aaPredicted RBP15.94■□□□□ 0.14
LRRC41-207ENST00000617190 VPS8Q8N3P4 1428 aa15.92■□□□□ 0.14
LRRC41-207ENST00000617190 MYT1LQ9UL68 1186 aa15.92■□□□□ 0.14
LRRC41-207ENST00000617190 MRS2Q9HD23 443 aa15.92■□□□□ 0.14
LRRC41-207ENST00000617190 FBLN2P98095 1184 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms