RNA–Protein interactions for RNA: ENST00000338074.6

EPB41L1-202, Transcript of erythrocyte membrane protein band 4.1 like 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene EPB41L1, Length 6,266 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41L1-202ENST00000338074 DCAF8L2P0C7V8 631 aa24.22■■□□□ 1.47
EPB41L1-202ENST00000338074 EHMT2Q96KQ7 1210 aa22.87■■□□□ 1.25
EPB41L1-202ENST00000338074 SUPT5HO00267 1087 aaKnown RBP22.86■■□□□ 1.25
EPB41L1-202ENST00000338074 SHROOM4Q9ULL8 1493 aa22.51■■□□□ 1.19
EPB41L1-202ENST00000338074 TTBK1Q5TCY1 1321 aaPredicted RBP22.02■■□□□ 1.12
EPB41L1-202ENST00000338074 FAM9AQ8IZU1 332 aaPredicted RBP21.78■■□□□ 1.08
EPB41L1-202ENST00000338074 RANGAP1P46060 587 aaPredicted RBP21.66■■□□□ 1.06
EPB41L1-202ENST00000338074 NISCHQ9Y2I1 1504 aa21.57■■□□□ 1.04
EPB41L1-202ENST00000338074 APLP2Q06481 763 aa21.53■■□□□ 1.04
EPB41L1-202ENST00000338074 PELP1Q8IZL8 1130 aaKnown RBP21.42■■□□□ 1.02
EPB41L1-202ENST00000338074 PCGF6Q9BYE7 350 aa21.41■■□□□ 1.02
EPB41L1-202ENST00000338074 ATP1B4Q9UN42 357 aaPredicted RBP21.27■■□□□ 1
EPB41L1-202ENST00000338074 PPARGC1BQ86YN6 1023 aaKnown RBP21.03■□□□□ 0.96
EPB41L1-202ENST00000338074 ERICH6Q7L0X2 663 aa21■□□□□ 0.95
EPB41L1-202ENST00000338074 YTHDC1Q96MU7 727 aaKnown RBP21■□□□□ 0.95
EPB41L1-202ENST00000338074 CCER1Q8TC90 406 aaPredicted RBP20.97■□□□□ 0.95
EPB41L1-202ENST00000338074 TRIM41Q8WV44 630 aa20.85■□□□□ 0.93
EPB41L1-202ENST00000338074 UBTFP17480 764 aaKnown RBP20.8■□□□□ 0.92
EPB41L1-202ENST00000338074 CENPBP07199 599 aaPredicted RBP20.73■□□□□ 0.91
EPB41L1-202ENST00000338074 CNGB1Q14028 1251 aaPredicted RBP20.6■□□□□ 0.89
EPB41L1-202ENST00000338074 ITGAEP38570 1179 aa20.53■□□□□ 0.88
EPB41L1-202ENST00000338074 POLR3GLQ9BT43 218 aa20.52■□□□□ 0.88
EPB41L1-202ENST00000338074 CHIC1Q5VXU3 224 aa20.46■□□□□ 0.87
EPB41L1-202ENST00000338074 NEFLP07196 543 aa20.45■□□□□ 0.87
EPB41L1-202ENST00000338074 MYT1Q01538 1121 aa20.43■□□□□ 0.86
EPB41L1-202ENST00000338074 ZEB1P37275 1124 aaPredicted RBP20.42■□□□□ 0.86
EPB41L1-202ENST00000338074 MYT1LQ9UL68 1186 aa20.42■□□□□ 0.86
EPB41L1-202ENST00000338074 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.33■□□□□ 0.85
EPB41L1-202ENST00000338074 HNRNPUL2Q1KMD3 747 aaKnown RBP20.33■□□□□ 0.85
EPB41L1-202ENST00000338074 LOC105371045A0A1W2PR82 267 aa20.22■□□□□ 0.83
EPB41L1-202ENST00000338074 SLC4A1APQ9BWU0 796 aaKnown RBP20.11■□□□□ 0.81
EPB41L1-202ENST00000338074 TRIM26Q12899 539 aaPredicted RBP20.02■□□□□ 0.8
EPB41L1-202ENST00000338074 DAXXQ9UER7 740 aaPredicted RBP20.01■□□□□ 0.79
EPB41L1-202ENST00000338074 HRCP23327 699 aa20■□□□□ 0.79
EPB41L1-202ENST00000338074 BCANQ96GW7 911 aa19.75■□□□□ 0.75
EPB41L1-202ENST00000338074 FAM50AQ14320 339 aaKnown RBP19.74■□□□□ 0.75
EPB41L1-202ENST00000338074 BCL11AQ9H165 835 aa19.74■□□□□ 0.75
EPB41L1-202ENST00000338074 NEUROD1Q13562 356 aa19.72■□□□□ 0.75
EPB41L1-202ENST00000338074 CLSPNQ9HAW4 1339 aa19.71■□□□□ 0.75
EPB41L1-202ENST00000338074 TRIM52Q96A61 297 aa19.65■□□□□ 0.74
EPB41L1-202ENST00000338074 ZNF326Q5BKZ1 582 aaKnown RBP19.64■□□□□ 0.73
EPB41L1-202ENST00000338074 ZNF316A6NFI3 1004 aaPredicted RBP19.6■□□□□ 0.73
EPB41L1-202ENST00000338074 DIEXFQ68CQ4 756 aaKnown RBP19.6■□□□□ 0.73
EPB41L1-202ENST00000338074 PABPN1Q86U42 306 aaKnown RBP eCLIP19.6■□□□□ 0.73
EPB41L1-202ENST00000338074 ARID3CA6NKF2 412 aa19.55■□□□□ 0.72
EPB41L1-202ENST00000338074 SLC24A1O60721 1099 aa19.51■□□□□ 0.71
EPB41L1-202ENST00000338074 FBLN2P98095 1184 aa19.47■□□□□ 0.71
EPB41L1-202ENST00000338074 RTL5Q5HYW3 569 aaPredicted RBP19.45■□□□□ 0.7
EPB41L1-202ENST00000338074 P3H3Q8IVL6 736 aa19.36■□□□□ 0.69
EPB41L1-202ENST00000338074 GTF3C3Q9Y5Q9 886 aa19.34■□□□□ 0.69
EPB41L1-202ENST00000338074 PLPPR3Q6T4P5 718 aa19.3■□□□□ 0.68
EPB41L1-202ENST00000338074 ABCC9O60706 1549 aa19.27■□□□□ 0.67
EPB41L1-202ENST00000338074 ANP32CO43423 234 aa19.2■□□□□ 0.66
EPB41L1-202ENST00000338074 CANXP27824 592 aaKnown RBP19.19■□□□□ 0.66
EPB41L1-202ENST00000338074 ZNF777Q9ULD5 760 aaPredicted RBP19.16■□□□□ 0.66
EPB41L1-202ENST00000338074 NPM2Q86SE8 214 aaKnown RBP19.14■□□□□ 0.65
EPB41L1-202ENST00000338074 ZBTB47Q9UFB7 747 aaPredicted RBP19.13■□□□□ 0.65
EPB41L1-202ENST00000338074 CDK11AQ9UQ88 783 aaPredicted RBP19.09■□□□□ 0.65
EPB41L1-202ENST00000338074 SENP3Q9H4L4 574 aaPredicted RBP19.03■□□□□ 0.64
EPB41L1-202ENST00000338074 SALL2Q9Y467 1007 aaPredicted RBP19.02■□□□□ 0.64
EPB41L1-202ENST00000338074 CHGAP10645 457 aaKnown RBP18.96■□□□□ 0.63
EPB41L1-202ENST00000338074 PLEKHG5O94827 1062 aa18.88■□□□□ 0.61
EPB41L1-202ENST00000338074 NEFMP07197 916 aa18.87■□□□□ 0.61
EPB41L1-202ENST00000338074 FKBP8Q14318 412 aa18.84■□□□□ 0.61
EPB41L1-202ENST00000338074 FAM9BQ8IZU0 186 aa18.84■□□□□ 0.61
EPB41L1-202ENST00000338074 ARXQ96QS3 562 aa18.83■□□□□ 0.61
EPB41L1-202ENST00000338074 SENP3-EIF4A1A0A087X0R7 540 aa18.8■□□□□ 0.6
EPB41L1-202ENST00000338074 CHIC2Q9UKJ5 165 aa18.79■□□□□ 0.6
EPB41L1-202ENST00000338074 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.78■□□□□ 0.65e-7■■□□□ 12.1
EPB41L1-202ENST00000338074 STAG3Q9UJ98 1225 aa18.78■□□□□ 0.6
EPB41L1-202ENST00000338074 ACIN1Q9UKV3 1341 aaKnown RBP18.77■□□□□ 0.6
EPB41L1-202ENST00000338074 ANP32AP39687 249 aaKnown RBP18.77■□□□□ 0.6
EPB41L1-202ENST00000338074 HIRIP3Q9BW71 556 aaPredicted RBP18.76■□□□□ 0.59
EPB41L1-202ENST00000338074 DDX10Q13206 875 aaKnown RBP18.75■□□□□ 0.59
EPB41L1-202ENST00000338074 EIF5BO60841 1220 aaKnown RBP18.73■□□□□ 0.59
EPB41L1-202ENST00000338074 IRX6P78412 446 aaPredicted RBP18.73■□□□□ 0.59
EPB41L1-202ENST00000338074 HNRNPUQ00839 825 aaKnown RBP eCLIP18.72■□□□□ 0.596e-7■■■■□ 21.7
EPB41L1-202ENST00000338074 SCAF1Q9H7N4 1312 aaKnown RBP18.72■□□□□ 0.59
EPB41L1-202ENST00000338074 ESF1Q9H501 851 aaKnown RBP18.71■□□□□ 0.59
EPB41L1-202ENST00000338074 NBR1Q14596 966 aa18.7■□□□□ 0.58
EPB41L1-202ENST00000338074 A0A0G2JS52 829 aa18.69■□□□□ 0.58
EPB41L1-202ENST00000338074 HSP90AA1P07900 732 aaKnown RBP18.68■□□□□ 0.58
EPB41L1-202ENST00000338074 CSRNP3Q8WYN3 585 aa18.68■□□□□ 0.58
EPB41L1-202ENST00000338074 KDM2AQ9Y2K7 1162 aa18.68■□□□□ 0.58
EPB41L1-202ENST00000338074 ZBTB7CA1YPR0 619 aa18.65■□□□□ 0.58
EPB41L1-202ENST00000338074 TONSLQ96HA7 1378 aa18.6■□□□□ 0.57
EPB41L1-202ENST00000338074 SCRIBQ14160 1630 aa18.5■□□□□ 0.55
EPB41L1-202ENST00000338074 TMC1Q8TDI8 760 aa18.48■□□□□ 0.55
EPB41L1-202ENST00000338074 CCDC136Q96JN2 1154 aa18.46■□□□□ 0.55
EPB41L1-202ENST00000338074 C14orf37Q86TY3 774 aa18.46■□□□□ 0.55
EPB41L1-202ENST00000338074 TPRNQ4KMQ1 711 aa18.45■□□□□ 0.54
EPB41L1-202ENST00000338074 ANP32BQ92688 251 aaKnown RBP18.44■□□□□ 0.54
EPB41L1-202ENST00000338074 UPF2Q9HAU5 1272 aaKnown RBP18.42■□□□□ 0.54
EPB41L1-202ENST00000338074 WDR43Q15061 677 aaKnown RBP eCLIP18.42■□□□□ 0.54
EPB41L1-202ENST00000338074 NPM1P06748 294 aaKnown RBP eCLIP18.41■□□□□ 0.54
EPB41L1-202ENST00000338074 MRS2Q9HD23 443 aa18.41■□□□□ 0.54
EPB41L1-202ENST00000338074 RRP7BPQ9NSQ0 103 aa18.39■□□□□ 0.53
EPB41L1-202ENST00000338074 MIER1Q8N108 512 aa18.39■□□□□ 0.53
EPB41L1-202ENST00000338074 KCNH8Q96L42 1107 aa18.37■□□□□ 0.53
EPB41L1-202ENST00000338074 RGL3Q3MIN7 710 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms