RNA–Protein interactions for RNA: ENST00000427444.1

HFM1-202, Transcript of HFM1, ATP dependent DNA helicase homolog, humanhuman

TSL 5

Gene HFM1, Length 672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1-202ENST00000427444 AEBP2Q6ZN18 517 aaPredicted RBP36.39■■■■□ 3.42
HFM1-202ENST00000427444 CHIC1Q5VXU3 224 aa34.84■■■■□ 3.17
HFM1-202ENST00000427444 SENP3Q9H4L4 574 aaPredicted RBP30.96■■■□□ 2.55
HFM1-202ENST00000427444 PHF23Q9BUL5 403 aaPredicted RBP30.64■■■□□ 2.5
HFM1-202ENST00000427444 FOXD1Q16676 465 aa28.85■■■□□ 2.21
HFM1-202ENST00000427444 PLPPR3Q6T4P5 718 aa27.99■■■□□ 2.07
HFM1-202ENST00000427444 PPP6R1Q9UPN7 881 aa27.24■■□□□ 1.95
HFM1-202ENST00000427444 ADRA2BP18089 450 aa27.21■■□□□ 1.95
HFM1-202ENST00000427444 PIAS4Q8N2W9 510 aaPredicted RBP27.07■■□□□ 1.92
HFM1-202ENST00000427444 MSH5O43196 834 aa26.84■■□□□ 1.89
HFM1-202ENST00000427444 POTEDQ86YR6 584 aa25.68■■□□□ 1.7
HFM1-202ENST00000427444 MAPK8IP2Q13387 824 aaPredicted RBP24.89■■□□□ 1.58
HFM1-202ENST00000427444 SCAF1Q9H7N4 1312 aaKnown RBP24.84■■□□□ 1.57
HFM1-202ENST00000427444 PPP4R3CPQ6ZMV5 832 aa24.61■■□□□ 1.53
HFM1-202ENST00000427444 DMRT2Q9Y5R5 561 aa24.6■■□□□ 1.53
HFM1-202ENST00000427444 CNKSR2Q8WXI2 1034 aa24.05■■□□□ 1.44
HFM1-202ENST00000427444 HOXD11P31277 338 aaPredicted RBP23.8■■□□□ 1.4
HFM1-202ENST00000427444 NCBP3Q53F19 620 aaKnown RBP23.75■■□□□ 1.39
HFM1-202ENST00000427444 RNF216Q9NWF9 866 aaPredicted RBP23.73■■□□□ 1.39
HFM1-202ENST00000427444 DCAF8L1A6NGE4 600 aa23.7■■□□□ 1.38
HFM1-202ENST00000427444 NPM3O75607 178 aaKnown RBP23.41■■□□□ 1.34
HFM1-202ENST00000427444 KCNA4P22459 653 aa23.28■■□□□ 1.32
HFM1-202ENST00000427444 RNF39Q9H2S5 420 aa22.94■■□□□ 1.26
HFM1-202ENST00000427444 CACNB1Q02641 598 aaPredicted RBP22.9■■□□□ 1.26
HFM1-202ENST00000427444 DNAJC5BQ9UF47 199 aa22.84■■□□□ 1.25
HFM1-202ENST00000427444 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.78■■□□□ 1.24
HFM1-202ENST00000427444 C1QBPQ07021 282 aaKnown RBP22.61■■□□□ 1.21
HFM1-202ENST00000427444 U3KPZ7 1027 aaPredicted RBP22.29■■□□□ 1.16
HFM1-202ENST00000427444 SLC4A2P04920 1241 aa22.27■■□□□ 1.16
HFM1-202ENST00000427444 SLC4A1APQ9BWU0 796 aaKnown RBP22.05■■□□□ 1.12
HFM1-202ENST00000427444 SPINK5Q9NQ38 1064 aaPredicted RBP21.9■■□□□ 1.1
HFM1-202ENST00000427444 CAPN15O75808 1086 aa21.88■■□□□ 1.09
HFM1-202ENST00000427444 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.74■■□□□ 1.07
HFM1-202ENST00000427444 HNRNPUL2Q1KMD3 747 aaKnown RBP21.74■■□□□ 1.07
HFM1-202ENST00000427444 APLP2Q06481 763 aa21.68■■□□□ 1.06
HFM1-202ENST00000427444 SAMD1Q6SPF0 538 aaPredicted RBP21.64■■□□□ 1.05
HFM1-202ENST00000427444 MYCNP04198 464 aaPredicted RBP21.63■■□□□ 1.05
HFM1-202ENST00000427444 TRHP20396 242 aaPredicted RBP21.61■■□□□ 1.05
HFM1-202ENST00000427444 DSG3P32926 999 aa21.6■■□□□ 1.05
HFM1-202ENST00000427444 FOXD4L1Q9NU39 408 aa21.59■■□□□ 1.05
HFM1-202ENST00000427444 ZNF219Q9P2Y4 722 aaPredicted RBP21.51■■□□□ 1.03
HFM1-202ENST00000427444 ABCB7O75027 752 aa21.41■■□□□ 1.02
HFM1-202ENST00000427444 ZBTB22O15209 634 aa21.4■■□□□ 1.02
HFM1-202ENST00000427444 ATF5Q9Y2D1 282 aaPredicted RBP21.15■□□□□ 0.98
HFM1-202ENST00000427444 POLA2Q14181 598 aa21.07■□□□□ 0.96
HFM1-202ENST00000427444 ATXN8OSP0DMR3 200 aa20.85■□□□□ 0.93
HFM1-202ENST00000427444 CSRNP3Q8WYN3 585 aa20.7■□□□□ 0.9
HFM1-202ENST00000427444 EHMT2Q96KQ7 1210 aa20.69■□□□□ 0.9
HFM1-202ENST00000427444 ZBTB12Q9Y330 459 aaPredicted RBP20.61■□□□□ 0.89
HFM1-202ENST00000427444 RBM42Q9BTD8 480 aaKnown RBP20.59■□□□□ 0.89
HFM1-202ENST00000427444 OSCARQ8IYS5 282 aa20.39■□□□□ 0.85
HFM1-202ENST00000427444 FBLN2P98095 1184 aa20.3■□□□□ 0.84
HFM1-202ENST00000427444 POTEHQ6S545 545 aa20.19■□□□□ 0.82
HFM1-202ENST00000427444 AKT1S1Q96B36 256 aa20.19■□□□□ 0.82
HFM1-202ENST00000427444 MKRN4PQ13434 485 aaPredicted RBP20.17■□□□□ 0.82
HFM1-202ENST00000427444 CHRDL2Q6WN34 429 aa20.04■□□□□ 0.8
HFM1-202ENST00000427444 REM2Q8IYK8 340 aaPredicted RBP20.03■□□□□ 0.8
HFM1-202ENST00000427444 SPDYE2BA6NHP3 402 aa20.01■□□□□ 0.79
HFM1-202ENST00000427444 SPDYE6P0CI01 402 aa20.01■□□□□ 0.79
HFM1-202ENST00000427444 SPDYE2Q495Y8 402 aa20.01■□□□□ 0.79
HFM1-202ENST00000427444 ZNF692Q9BU19 519 aaPredicted RBP19.88■□□□□ 0.77
HFM1-202ENST00000427444 PITPNM1O00562 1244 aa19.82■□□□□ 0.76
HFM1-202ENST00000427444 SSUH2Q9Y2M2 353 aa19.76■□□□□ 0.75
HFM1-202ENST00000427444 PIP4P2Q8N4L2 257 aa19.64■□□□□ 0.73
HFM1-202ENST00000427444 CLEC11AQ9Y240 323 aa19.62■□□□□ 0.73
HFM1-202ENST00000427444 SPDYE1Q8NFV5 336 aaPredicted RBP19.6■□□□□ 0.73
HFM1-202ENST00000427444 PABPN1Q86U42 306 aaKnown RBP eCLIP19.59■□□□□ 0.73
HFM1-202ENST00000427444 FXR2P51116 673 aaKnown RBP eCLIP19.54■□□□□ 0.72
HFM1-202ENST00000427444 SPDYE4A6NLX3 237 aa19.41■□□□□ 0.7
HFM1-202ENST00000427444 PRKAR2AP13861 404 aaKnown RBP19.32■□□□□ 0.68
HFM1-202ENST00000427444 PRR29P0C7W0 189 aa19.31■□□□□ 0.68
HFM1-202ENST00000427444 HAX1O00165 279 aa19.24■□□□□ 0.67
HFM1-202ENST00000427444 CHADLQ6NUI6 762 aa19.2■□□□□ 0.66
HFM1-202ENST00000427444 SP7Q8TDD2 431 aaPredicted RBP19.08■□□□□ 0.64
HFM1-202ENST00000427444 STAG3Q9UJ98 1225 aa19.08■□□□□ 0.64
HFM1-202ENST00000427444 EVX2Q03828 476 aa19■□□□□ 0.63
HFM1-202ENST00000427444 C19orf67A6NJJ6 358 aa18.91■□□□□ 0.62
HFM1-202ENST00000427444 FARP1Q9Y4F1 1045 aaPredicted RBP18.91■□□□□ 0.62
HFM1-202ENST00000427444 PROM2Q8N271 834 aa18.9■□□□□ 0.62
HFM1-202ENST00000427444 CREBZFQ9NS37 354 aa18.88■□□□□ 0.61
HFM1-202ENST00000427444 FKBP8Q14318 412 aa18.8■□□□□ 0.6
HFM1-202ENST00000427444 CD44P16070 742 aaKnown RBP18.73■□□□□ 0.59
HFM1-202ENST00000427444 GABBR2O75899 941 aa18.58■□□□□ 0.56
HFM1-202ENST00000427444 MNX1P50219 401 aaPredicted RBP18.57■□□□□ 0.56
HFM1-202ENST00000427444 NPM1P06748 294 aaKnown RBP eCLIP18.55■□□□□ 0.56
HFM1-202ENST00000427444 ZRANB1Q9UGI0 708 aa18.54■□□□□ 0.56
HFM1-202ENST00000427444 MIER1Q8N108 512 aa18.51■□□□□ 0.55
HFM1-202ENST00000427444 PLEKHG5O94827 1062 aa18.44■□□□□ 0.54
HFM1-202ENST00000427444 PAK3O75914 559 aaPredicted RBP18.43■□□□□ 0.54
HFM1-202ENST00000427444 PLCD3Q8N3E9 789 aa18.41■□□□□ 0.54
HFM1-202ENST00000427444 ZNF579Q8NAF0 562 aaKnown RBP18.41■□□□□ 0.54
HFM1-202ENST00000427444 CLCN6P51797 869 aa18.31■□□□□ 0.52
HFM1-202ENST00000427444 PHF12Q96QT6 1004 aa18.31■□□□□ 0.52
HFM1-202ENST00000427444 TSPYL2Q9H2G4 693 aaPredicted RBP18.28■□□□□ 0.52
HFM1-202ENST00000427444 FBXO3Q9UK99 471 aa18.27■□□□□ 0.52
HFM1-202ENST00000427444 GALR2O43603 387 aaPredicted RBP18.21■□□□□ 0.51
HFM1-202ENST00000427444 DCBLD2Q96PD2 775 aa18.18■□□□□ 0.5
HFM1-202ENST00000427444 ZBTB47Q9UFB7 747 aaPredicted RBP18.18■□□□□ 0.5
HFM1-202ENST00000427444 POTEIP0CG38 1075 aa18.17■□□□□ 0.5
HFM1-202ENST00000427444 RASEFQ8IZ41 740 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms