RNA–Protein interactions for RNA: ENST00000244217.5

MCEE-201, Transcript of methylmalonyl-CoA epimerase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MCEE, Length 835 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCEE-201ENST00000244217 AEBP2Q6ZN18 517 aaPredicted RBP34.27■■■■□ 3.08
MCEE-201ENST00000244217 CHIC1Q5VXU3 224 aa32.29■■■□□ 2.76
MCEE-201ENST00000244217 SENP3Q9H4L4 574 aaPredicted RBP29.27■■■□□ 2.28
MCEE-201ENST00000244217 NISCHQ9Y2I1 1504 aa28.93■■■□□ 2.22
MCEE-201ENST00000244217 PHF23Q9BUL5 403 aaPredicted RBP28.87■■■□□ 2.21
MCEE-201ENST00000244217 FOXD1Q16676 465 aa27.33■■□□□ 1.97
MCEE-201ENST00000244217 CCDC180Q9P1Z9 1646 aa25.9■■□□□ 1.74
MCEE-201ENST00000244217 MSH5O43196 834 aa25.67■■□□□ 1.7
MCEE-201ENST00000244217 PLPPR3Q6T4P5 718 aa25.66■■□□□ 1.7
MCEE-201ENST00000244217 ABCC9O60706 1549 aa25.58■■□□□ 1.68
MCEE-201ENST00000244217 POTEDQ86YR6 584 aa25.53■■□□□ 1.68
MCEE-201ENST00000244217 PIAS4Q8N2W9 510 aaPredicted RBP25.41■■□□□ 1.66
MCEE-201ENST00000244217 PPP6R1Q9UPN7 881 aa25.35■■□□□ 1.65
MCEE-201ENST00000244217 ADRA2BP18089 450 aa25.22■■□□□ 1.63
MCEE-201ENST00000244217 RB1CC1Q8TDY2 1594 aa24.53■■□□□ 1.52
MCEE-201ENST00000244217 NACADO15069 1562 aa24.44■■□□□ 1.5
MCEE-201ENST00000244217 MYO15BQ96JP2 1530 aa24.24■■□□□ 1.47
MCEE-201ENST00000244217 DCAF8L2P0C7V8 631 aa24.19■■□□□ 1.46
MCEE-201ENST00000244217 ZCCHC6Q5VYS8 1495 aaKnown RBP24.03■■□□□ 1.44
MCEE-201ENST00000244217 DCAF1Q9Y4B6 1507 aa23.99■■□□□ 1.43
MCEE-201ENST00000244217 UNC13AQ9UPW8 1703 aa23.91■■□□□ 1.42
MCEE-201ENST00000244217 PABPN1Q86U42 306 aaKnown RBP eCLIP23.81■■□□□ 1.4
MCEE-201ENST00000244217 DNAJC5BQ9UF47 199 aa23.78■■□□□ 1.4
MCEE-201ENST00000244217 BICRAQ9NZM4 1560 aa23.77■■□□□ 1.4
MCEE-201ENST00000244217 SHROOM4Q9ULL8 1493 aa23.61■■□□□ 1.37
MCEE-201ENST00000244217 SCRIBQ14160 1630 aa23.51■■□□□ 1.35
MCEE-201ENST00000244217 MAPK8IP2Q13387 824 aaPredicted RBP23.26■■□□□ 1.31
MCEE-201ENST00000244217 DMRT2Q9Y5R5 561 aa23.19■■□□□ 1.3
MCEE-201ENST00000244217 EIF4G1Q04637 1599 aaKnown RBP23.18■■□□□ 1.3
MCEE-201ENST00000244217 CC2D2AQ9P2K1 1620 aa23.15■■□□□ 1.3
MCEE-201ENST00000244217 SCAF1Q9H7N4 1312 aaKnown RBP23.1■■□□□ 1.29
MCEE-201ENST00000244217 CECR2Q9BXF3 1484 aa23.05■■□□□ 1.28
MCEE-201ENST00000244217 NCAPD3P42695 1498 aa22.55■■□□□ 1.2
MCEE-201ENST00000244217 SMARCA4P51532 1647 aa22.5■■□□□ 1.19
MCEE-201ENST00000244217 ATAD2BQ9ULI0 1458 aa22.48■■□□□ 1.19
MCEE-201ENST00000244217 SMARCA2P51531 1590 aa22.46■■□□□ 1.19
MCEE-201ENST00000244217 BAZ1AQ9NRL2 1556 aaPredicted RBP22.46■■□□□ 1.19
MCEE-201ENST00000244217 PPP4R3CPQ6ZMV5 832 aa22.45■■□□□ 1.18
MCEE-201ENST00000244217 HMGXB3Q12766 1538 aa22.41■■□□□ 1.18
MCEE-201ENST00000244217 PEG3Q9GZU2 1588 aa22.35■■□□□ 1.17
MCEE-201ENST00000244217 BAZ1BQ9UIG0 1483 aaKnown RBP22.27■■□□□ 1.16
MCEE-201ENST00000244217 HOXD11P31277 338 aaPredicted RBP22.25■■□□□ 1.15
MCEE-201ENST00000244217 MROH2BQ7Z745 1585 aa22.25■■□□□ 1.15
MCEE-201ENST00000244217 CACNB1Q02641 598 aaPredicted RBP22.17■■□□□ 1.14
MCEE-201ENST00000244217 DCAF8L1A6NGE4 600 aa22.14■■□□□ 1.13
MCEE-201ENST00000244217 CNKSR2Q8WXI2 1034 aa22.11■■□□□ 1.13
MCEE-201ENST00000244217 ERCC6Q03468 1493 aa22.1■■□□□ 1.13
MCEE-201ENST00000244217 CUX2O14529 1486 aa22.05■■□□□ 1.12
MCEE-201ENST00000244217 NESP48681 1621 aa22.02■■□□□ 1.12
MCEE-201ENST00000244217 LAMC3Q9Y6N6 1575 aa22■■□□□ 1.11
MCEE-201ENST00000244217 RNF216Q9NWF9 866 aaPredicted RBP21.99■■□□□ 1.11
MCEE-201ENST00000244217 WIZO95785 1651 aa21.97■■□□□ 1.11
MCEE-201ENST00000244217 RNF39Q9H2S5 420 aa21.9■■□□□ 1.1
MCEE-201ENST00000244217 RSF1Q96T23 1441 aaPredicted RBP21.89■■□□□ 1.1
MCEE-201ENST00000244217 PDS5BQ9NTI5 1447 aa21.87■■□□□ 1.09
MCEE-201ENST00000244217 CADPSQ9ULU8 1353 aa21.86■■□□□ 1.09
MCEE-201ENST00000244217 THOC2Q8NI27 1593 aaKnown RBP21.82■■□□□ 1.08
MCEE-201ENST00000244217 TOP2AP11388 1531 aaKnown RBP21.77■■□□□ 1.08
MCEE-201ENST00000244217 KIF21AQ7Z4S6 1674 aa21.77■■□□□ 1.08
MCEE-201ENST00000244217 DNAJC5Q9H3Z4 198 aa21.74■■□□□ 1.07
MCEE-201ENST00000244217 CFTRP13569 1480 aa21.66■■□□□ 1.06
MCEE-201ENST00000244217 MRC2Q9UBG0 1479 aa21.64■■□□□ 1.05
MCEE-201ENST00000244217 CEP164Q9UPV0 1460 aa21.6■■□□□ 1.05
MCEE-201ENST00000244217 WDR62O43379 1518 aa21.59■■□□□ 1.05
MCEE-201ENST00000244217 FANCD2Q9BXW9 1451 aa21.58■■□□□ 1.05
MCEE-201ENST00000244217 C1QBPQ07021 282 aaKnown RBP21.57■■□□□ 1.04
MCEE-201ENST00000244217 NCBP3Q53F19 620 aaKnown RBP21.56■■□□□ 1.04
MCEE-201ENST00000244217 CCDC88BA6NC98 1476 aa21.5■■□□□ 1.03
MCEE-201ENST00000244217 PRDM2Q13029 1718 aa21.46■■□□□ 1.03
MCEE-201ENST00000244217 URB2Q14146 1524 aaKnown RBP21.39■■□□□ 1.01
MCEE-201ENST00000244217 ABCC8Q09428 1581 aa21.24■□□□□ 0.99
MCEE-201ENST00000244217 TOPBP1Q92547 1522 aa21.2■□□□□ 0.98
MCEE-201ENST00000244217 NPM3O75607 178 aaKnown RBP21.19■□□□□ 0.98
MCEE-201ENST00000244217 IFT140Q96RY7 1462 aa21.18■□□□□ 0.98
MCEE-201ENST00000244217 DNMBPQ6XZF7 1577 aa21.16■□□□□ 0.98
MCEE-201ENST00000244217 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.12■□□□□ 0.973e-7■■□□□ 13.1
MCEE-201ENST00000244217 ZNF608Q9ULD9 1512 aaPredicted RBP21.05■□□□□ 0.96
MCEE-201ENST00000244217 OSCARQ8IYS5 282 aa21.04■□□□□ 0.96
MCEE-201ENST00000244217 KCNA4P22459 653 aa21.03■□□□□ 0.96
MCEE-201ENST00000244217 POLA1P09884 1462 aaPredicted RBP21.01■□□□□ 0.95
MCEE-201ENST00000244217 TARBP1Q13395 1621 aaKnown RBP21■□□□□ 0.95
MCEE-201ENST00000244217 SUPT5HO00267 1087 aaKnown RBP20.99■□□□□ 0.95
MCEE-201ENST00000244217 EIF4G3O43432 1585 aaKnown RBP20.97■□□□□ 0.95
MCEE-201ENST00000244217 CUX1P39880 1505 aa20.9■□□□□ 0.94
MCEE-201ENST00000244217 SOGA1O94964 1423 aa20.9■□□□□ 0.94
MCEE-201ENST00000244217 AQRO60306 1485 aaKnown RBP eCLIP20.89■□□□□ 0.949e-6■■□□□ 13.1
MCEE-201ENST00000244217 WDR97A6NE52 1622 aa20.89■□□□□ 0.93
MCEE-201ENST00000244217 FGD5Q6ZNL6 1462 aa20.88■□□□□ 0.93
MCEE-201ENST00000244217 RAD54L2Q9Y4B4 1467 aa20.87■□□□□ 0.93
MCEE-201ENST00000244217 TDRD9Q8NDG6 1382 aaKnown RBP20.8■□□□□ 0.92
MCEE-201ENST00000244217 TRIM41Q8WV44 630 aa20.78■□□□□ 0.92
MCEE-201ENST00000244217 CHD1O14646 1710 aa20.75■□□□□ 0.91
MCEE-201ENST00000244217 GRIN2BQ13224 1484 aa20.73■□□□□ 0.91
MCEE-201ENST00000244217 MAGI1Q96QZ7 1491 aaPredicted RBP20.72■□□□□ 0.91
MCEE-201ENST00000244217 RIMBP3CA6NJZ7 1639 aa20.71■□□□□ 0.91
MCEE-201ENST00000244217 RIMBP3BA6NNM3 1639 aa20.71■□□□□ 0.91
MCEE-201ENST00000244217 RIMBP3Q9UFD9 1639 aa20.71■□□□□ 0.91
MCEE-201ENST00000244217 ABCA10Q8WWZ4 1543 aa20.71■□□□□ 0.91
MCEE-201ENST00000244217 SNAPC4Q5SXM2 1469 aa20.7■□□□□ 0.9
MCEE-201ENST00000244217 ARHGEF11O15085 1522 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms