RNA–Protein interactions for RNA: ENST00000498402.2

LRRC41-205, Transcript of leucine rich repeat containing 41, humanhuman

TSL 2

Gene LRRC41, Length 2,068 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC41-205ENST00000498402 NISCHQ9Y2I1 1504 aa37.77■■■■□ 3.64
LRRC41-205ENST00000498402 CCDC180Q9P1Z9 1646 aa32.48■■■□□ 2.79
LRRC41-205ENST00000498402 ZCCHC6Q5VYS8 1495 aaKnown RBP31.88■■■□□ 2.69
LRRC41-205ENST00000498402 SHROOM4Q9ULL8 1493 aa31.55■■■□□ 2.64
LRRC41-205ENST00000498402 DCAF1Q9Y4B6 1507 aa31.14■■■□□ 2.58
LRRC41-205ENST00000498402 DCAF8L2P0C7V8 631 aa31.09■■■□□ 2.57
LRRC41-205ENST00000498402 SUPT5HO00267 1087 aaKnown RBP30.74■■■□□ 2.51
LRRC41-205ENST00000498402 MYO15BQ96JP2 1530 aa30.45■■■□□ 2.46
LRRC41-205ENST00000498402 ABCC9O60706 1549 aa30.16■■■□□ 2.42
LRRC41-205ENST00000498402 SCRIBQ14160 1630 aa30.13■■■□□ 2.41
LRRC41-205ENST00000498402 NACADO15069 1562 aa30.08■■■□□ 2.41
LRRC41-205ENST00000498402 CHIC1Q5VXU3 224 aa29.8■■■□□ 2.36
LRRC41-205ENST00000498402 RSF1Q96T23 1441 aaPredicted RBP29.65■■■□□ 2.34
LRRC41-205ENST00000498402 RB1CC1Q8TDY2 1594 aa29.65■■■□□ 2.34
LRRC41-205ENST00000498402 CECR2Q9BXF3 1484 aa29.37■■■□□ 2.29
LRRC41-205ENST00000498402 MROH2BQ7Z745 1585 aa29.27■■■□□ 2.28
LRRC41-205ENST00000498402 UNC13AQ9UPW8 1703 aa29.18■■■□□ 2.26
LRRC41-205ENST00000498402 WIZO95785 1651 aa29.1■■■□□ 2.25
LRRC41-205ENST00000498402 BAZ1AQ9NRL2 1556 aaPredicted RBP29.07■■■□□ 2.24
LRRC41-205ENST00000498402 SMARCA4P51532 1647 aa28.87■■■□□ 2.21
LRRC41-205ENST00000498402 BICRAQ9NZM4 1560 aa28.82■■■□□ 2.2
LRRC41-205ENST00000498402 LOC105371045A0A1W2PR82 267 aa28.78■■■□□ 2.2
LRRC41-205ENST00000498402 TRIM41Q8WV44 630 aa28.77■■■□□ 2.2
LRRC41-205ENST00000498402 TOP2AP11388 1531 aaKnown RBP28.72■■■□□ 2.19
LRRC41-205ENST00000498402 PABPN1Q86U42 306 aaKnown RBP eCLIP28.66■■■□□ 2.18
LRRC41-205ENST00000498402 EIF4G1Q04637 1599 aaKnown RBP28.61■■■□□ 2.17
LRRC41-205ENST00000498402 SMARCA2P51531 1590 aa28.52■■■□□ 2.16
LRRC41-205ENST00000498402 CCDC88BA6NC98 1476 aa28.51■■■□□ 2.15
LRRC41-205ENST00000498402 PEG3Q9GZU2 1588 aa28.43■■■□□ 2.14
LRRC41-205ENST00000498402 FAM9AQ8IZU1 332 aaPredicted RBP28.37■■■□□ 2.13
LRRC41-205ENST00000498402 PCGF6Q9BYE7 350 aa28.28■■■□□ 2.12
LRRC41-205ENST00000498402 ABCC8Q09428 1581 aa28.21■■■□□ 2.11
LRRC41-205ENST00000498402 ATAD2BQ9ULI0 1458 aa28.2■■■□□ 2.11
LRRC41-205ENST00000498402 HRCP23327 699 aa28.09■■■□□ 2.09
LRRC41-205ENST00000498402 BAZ1BQ9UIG0 1483 aaKnown RBP28.09■■■□□ 2.09
LRRC41-205ENST00000498402 EHMT2Q96KQ7 1210 aa28.01■■■□□ 2.07
LRRC41-205ENST00000498402 TRIM26Q12899 539 aaPredicted RBP28■■■□□ 2.07
LRRC41-205ENST00000498402 WRNQ14191 1432 aaPredicted RBP eCLIP27.86■■■□□ 2.055e-7■□□□□ 10
LRRC41-205ENST00000498402 SOGA1O94964 1423 aa27.85■■■□□ 2.05
LRRC41-205ENST00000498402 EEA1Q15075 1411 aa27.82■■■□□ 2.04
LRRC41-205ENST00000498402 HMGXB3Q12766 1538 aa27.79■■■□□ 2.04
LRRC41-205ENST00000498402 NCAPD3P42695 1498 aa27.79■■■□□ 2.04
LRRC41-205ENST00000498402 SYNJ1O43426 1573 aa27.76■■■□□ 2.03
LRRC41-205ENST00000498402 RUSC2Q8N2Y8 1516 aa27.73■■■□□ 2.03
LRRC41-205ENST00000498402 CSRNP3Q8WYN3 585 aa27.69■■■□□ 2.02
LRRC41-205ENST00000498402 TNIKQ9UKE5 1360 aa27.61■■■□□ 2.01
LRRC41-205ENST00000498402 CEP162Q5TB80 1403 aa27.55■■■□□ 2
LRRC41-205ENST00000498402 GOLGA3Q08378 1498 aa27.53■■■□□ 2
LRRC41-205ENST00000498402 TOP2BQ02880 1626 aa27.53■■■□□ 2
LRRC41-205ENST00000498402 BIVM-ERCC5R4GMW8 1640 aa27.48■■□□□ 1.99
LRRC41-205ENST00000498402 KIF21BO75037 1637 aa27.46■■□□□ 1.99
LRRC41-205ENST00000498402 UBTFP17480 764 aaKnown RBP27.44■■□□□ 1.98
LRRC41-205ENST00000498402 CEP164Q9UPV0 1460 aa27.43■■□□□ 1.98
LRRC41-205ENST00000498402 PPARGC1BQ86YN6 1023 aaKnown RBP27.42■■□□□ 1.98
LRRC41-205ENST00000498402 CFTRP13569 1480 aa27.41■■□□□ 1.98
LRRC41-205ENST00000498402 CUX1P39880 1505 aa27.3■■□□□ 1.96
LRRC41-205ENST00000498402 PRDM2Q13029 1718 aa27.3■■□□□ 1.96
LRRC41-205ENST00000498402 CC2D2AQ9P2K1 1620 aa27.27■■□□□ 1.96
LRRC41-205ENST00000498402 ZEB1P37275 1124 aaPredicted RBP27.25■■□□□ 1.95
LRRC41-205ENST00000498402 RAPGEF2Q9Y4G8 1499 aa27.22■■□□□ 1.95
LRRC41-205ENST00000498402 CADPSQ9ULU8 1353 aa27.16■■□□□ 1.94
LRRC41-205ENST00000498402 CLIP1P30622 1438 aa27.14■■□□□ 1.94
LRRC41-205ENST00000498402 ERICH3Q5RHP9 1530 aa27.1■■□□□ 1.93
LRRC41-205ENST00000498402 PRXQ9BXM0 1461 aa27.1■■□□□ 1.93
LRRC41-205ENST00000498402 KIF27Q86VH2 1401 aa27.07■■□□□ 1.92
LRRC41-205ENST00000498402 TTBK1Q5TCY1 1321 aaPredicted RBP27.02■■□□□ 1.92
LRRC41-205ENST00000498402 VPS8Q8N3P4 1428 aa27.01■■□□□ 1.91
LRRC41-205ENST00000498402 FANCD2Q9BXW9 1451 aa26.88■■□□□ 1.89
LRRC41-205ENST00000498402 FGD5Q6ZNL6 1462 aa26.87■■□□□ 1.89
LRRC41-205ENST00000498402 CUX2O14529 1486 aa26.85■■□□□ 1.89
LRRC41-205ENST00000498402 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.85■■□□□ 1.89
LRRC41-205ENST00000498402 RANGAP1P46060 587 aaPredicted RBP26.85■■□□□ 1.89
LRRC41-205ENST00000498402 ARAP1Q96P48 1450 aa26.8■■□□□ 1.88
LRRC41-205ENST00000498402 IGF1RP08069 1367 aa26.79■■□□□ 1.88
LRRC41-205ENST00000498402 CCER1Q8TC90 406 aaPredicted RBP26.79■■□□□ 1.88
LRRC41-205ENST00000498402 APLP2Q06481 763 aa26.77■■□□□ 1.88
LRRC41-205ENST00000498402 NESP48681 1621 aa26.76■■□□□ 1.87
LRRC41-205ENST00000498402 DNMBPQ6XZF7 1577 aa26.76■■□□□ 1.87
LRRC41-205ENST00000498402 LAMC3Q9Y6N6 1575 aa26.7■■□□□ 1.86
LRRC41-205ENST00000498402 TOPBP1Q92547 1522 aa26.68■■□□□ 1.86
LRRC41-205ENST00000498402 CARMIL1Q5VZK9 1371 aa26.66■■□□□ 1.86
LRRC41-205ENST00000498402 ARHGAP35Q9NRY4 1499 aa26.64■■□□□ 1.85
LRRC41-205ENST00000498402 POLA1P09884 1462 aaPredicted RBP26.62■■□□□ 1.85
LRRC41-205ENST00000498402 ABCA10Q8WWZ4 1543 aa26.61■■□□□ 1.85
LRRC41-205ENST00000498402 RAD54L2Q9Y4B4 1467 aa26.59■■□□□ 1.85
LRRC41-205ENST00000498402 URB2Q14146 1524 aaKnown RBP26.52■■□□□ 1.84
LRRC41-205ENST00000498402 HNRNPUL2Q1KMD3 747 aaKnown RBP26.51■■□□□ 1.83
LRRC41-205ENST00000498402 PDS5BQ9NTI5 1447 aa26.48■■□□□ 1.83
LRRC41-205ENST00000498402 KANK4Q5T7N3 995 aaPredicted RBP26.48■■□□□ 1.83
LRRC41-205ENST00000498402 DNAJC5BQ9UF47 199 aa26.48■■□□□ 1.83
LRRC41-205ENST00000498402 WDR97A6NE52 1622 aa26.46■■□□□ 1.83
LRRC41-205ENST00000498402 CUL7Q14999 1698 aa26.45■■□□□ 1.82
LRRC41-205ENST00000498402 KIF21AQ7Z4S6 1674 aa26.39■■□□□ 1.82
LRRC41-205ENST00000498402 MAP3K1Q13233 1512 aa26.34■■□□□ 1.81
LRRC41-205ENST00000498402 ABCA5Q8WWZ7 1642 aa26.34■■□□□ 1.81
LRRC41-205ENST00000498402 RRBP1Q9P2E9 1410 aaKnown RBP26.33■■□□□ 1.81
LRRC41-205ENST00000498402 TIAM1Q13009 1591 aa26.3■■□□□ 1.8
LRRC41-205ENST00000498402 CTTNBP2Q8WZ74 1663 aa26.3■■□□□ 1.8
LRRC41-205ENST00000498402 FHAD1B1AJZ9 1412 aa26.27■■□□□ 1.8
LRRC41-205ENST00000498402 EFCAB5A4FU69 1503 aa26.26■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms